Cutibacterium avidum: PALO_07040
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Entry
PALO_07040 CDS
T02632
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pra
Cutibacterium avidum
Pathway
pra00470
D-Amino acid metabolism
pra00550
Peptidoglycan biosynthesis
pra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PALO_07040 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PALO_07040 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pra01011
]
PALO_07040 (murD)
Enzymes [BR:
pra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PALO_07040 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pra01011
]
Precursor biosynthesis
Amino acid ligase
PALO_07040 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
NAD_binding_7
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AGJ78016
LinkDB
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Position
complement(1552097..1553578)
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AA seq
493 aa
AA seq
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MTFSGKVDLSSADRLFDWSGVHVVVAGLGTSGYAAADALLELDATVLVLDDSDDDGHRDK
GGLLEVLGAEVRLGAGAAAELPEGTDLVIVSPGWRPTQSLVASALLQGIPVWGEPELAWR
LMHPDRVVPWLATTGTNGKTTTTQMTESILNAAGLRACAVGNIGRPILEAMADEIDYDVF
AVELSSFQLHWSNSLSLHSVAVLNLQQDHLEWYAHEDDPFASYAADKARIYHQVTNSCVY
NVADPATEHMVEEADVVEGARAIGFTTGIPGPSMIGVVDDLIVDRAFVDQRATSAMELAH
LDDVRPFAPHNVENALAAAALTRSFGVPARAVGQGLRDLHLGGHRIETVHKAGGITWVDD
SKATNPHAANSSMRAFEHIVWIAGGQAKGTNFDDLVTTHAEKLRGAIVLGTDRDVVAKSL
AEHAPHVPVVVIDDMSRECMAKAVREAAEMARPGDTVLMAPGCASLDIWPGYAARGDDFV
SAARQIDGPDADG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttctccggaaaggttgatctgagctcggccgaccggctgttcgactggtcggga
gtacacgtcgtcgtcgccggtctgggtacttctggttacgccgctgccgacgccctgctc
gagctcgatgccacggtgctcgtgctcgacgactccgacgacgatggtcatcgcgacaaa
ggcgggctgctcgaggtgctcggtgccgaggtgcgactgggggccggggcggcagctgaa
cttcctgagggcaccgacctcgtcatcgtgtccccggggtggcgtccgacccagtccttg
gtggccagtgctctactccaggggattccagtctggggagagccagaactggcctggcgt
ctcatgcatccggaccgcgtcgtcccgtggcttgccaccactggcaccaatggcaagacg
acgaccacccagatgaccgagtcgattctcaacgcggcggggttgcgagcctgcgccgtc
ggtaacatcggtcggcccatcctggaggcgatggccgacgagatcgactacgacgtcttc
gccgtggagctctccagcttccagctacactggtcgaattccctctccctgcactcggtt
gccgtcctgaatctgcagcaggatcatttggagtggtatgcccacgaggatgaccccttc
gcctcctatgcggctgacaaggctcggatctatcaccaggtgacgaattcctgcgtctac
aatgtcgccgaccccgcgaccgagcacatggtcgaggaggcagatgtcgtcgagggagct
cgcgccatcggcttcactaccggaatccccggcccctccatgatcggtgtcgtcgatgat
ctcatcgtcgaccgtgccttcgtcgaccagcgggcgacctccgccatggagctggcccac
ctcgatgacgtccgtcctttcgccccacacaatgtcgagaacgccttggcggcagctgcc
ctgactcgctccttcggcgtgccggcccgcgccgtgggtcagggtctgcgcgacctccac
cttggcgggcatcgtatcgagaccgtccataaagctggtggcatcacctgggtcgacgac
tccaaggccaccaaccctcacgccgcgaactcctcgatgcgcgccttcgagcacatcgtg
tggatcgccggaggccaggccaagggcaccaactttgacgacctggtcaccacccacgcc
gagaagctgcgcggagccatcgtgctgggaaccgaccgtgacgtcgtcgccaagtccttg
gccgagcacgccccgcatgtccccgtcgtcgtcatcgatgacatgtcgcgagaatgcatg
gccaaggcagttcgcgaggctgccgagatggcccgccccggcgacaccgtcttgatggct
ccggggtgcgcgagcctcgacatttggcctggatatgctgcccgcggtgacgatttcgtc
agcgcggcacgacaaattgacgggccggatgccgatggctga
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