Cutibacterium avidum: PALO_07220
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Entry
PALO_07220 CDS
T02632
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pra
Cutibacterium avidum
Pathway
pra03030
DNA replication
pra03430
Mismatch repair
pra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PALO_07220
03430 Mismatch repair
PALO_07220
03440 Homologous recombination
PALO_07220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_07220
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_07220
Enzymes [BR:
pra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PALO_07220
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PALO_07220
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PALO_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
DUF8082
Motif
Other DBs
NCBI-ProteinID:
AGJ78052
LinkDB
All DBs
Position
1592203..1594056
Genome browser
AA seq
617 aa
AA seq
DB search
MRATALTRLFSIGLAHVQHILSQGVSTVPIMSAAPLQPSFDDLGTPLPDVTFCVVDLETT
GTGDNAQITEIGAVKVCGGHVEGEFQTLVRPSEPIPASVQVLTGITDTMVRPAPPLDAVL
PSWSEFSRGTVLVAHNARFDVGFLKRAYAEHDYSWENPAVVDTLALARSVLPRDEVRNYR
LGTLSQLFRTTTTPSHRALADARATVDVLHGLIERVGNLGVTTLEDLLEMTHRVPQARRR
RRVWAKGLPEGPGVYWFCLDKPAPSPPEVLYVGTSVNIRRRVSQYFTASETRRRMDEMVR
VATGVKARECSTRLEAGVRELRLIDAHRPRYNRRSRRQGSVWWVTLTDEAHPRPSVMQRA
HRGSQPPWGPFTSRRAATRAAIVLAEAFGLRQCSGSLSRHPDGCPLAEMGRCSAPCLNPA
TDYSAIVDRTRTAMTSDVRDLTDRLAERIAHLSDAERFEEAAEYTEDAREALRATRRRAR
LTSLASCRQIVAARREGAFWEIHVVRHGRLAGAGRCSTGTDPMPTIDAICATAESVAPPP
AGLPACTIEEAELVASWFEEPGVRLVDITGEWSWPAHCWMSTEELAVRVAASHHPGDDEG
GETDREDCQSRPELATV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgccacggctctgacacggctgttctccatcggtctcgcccatgtccaacacatc
ctgtcacagggagtgtctaccgtcccgatcatgagtgccgcacctctccagccctccttc
gacgatctgggcactcctctgcccgacgtcaccttctgcgtcgtcgacctcgagaccacc
ggcactggcgacaacgcccagatcaccgagatcggggcggtcaaggtgtgcggaggtcac
gtcgaaggtgagttccagaccctcgtccgcccgtccgagccaattccggcttccgtccag
gtcctcaccggtatcacggacaccatggtccggcctgcaccaccactggacgccgtcctg
ccgagttggtcagaattcagtcggggcacggtgctggtggcccacaacgcccgcttcgac
gtcggcttcctcaagcgcgcctatgccgagcatgactactcgtgggagaaccctgctgtc
gtggacaccctcgcgctggctcgctccgtgctcccccgtgacgaggttcgcaactacagg
ttgggcaccctgtcccagttgtttcggaccacgacgacgccgtctcatcgcgcactggct
gatgctcgggcgactgtcgacgtcctgcacggtctcatcgaacgagtgggaaacctcggc
gtcaccaccttggaagacctgctggagatgactcaccgggtccctcaagctcggcgacgc
cgccgggtgtgggccaagggcctcccggaaggacctggcgtgtactggttctgcctcgac
aaaccagcgccctccccgcccgaggtactttacgtgggcacgtcggtcaatattcgacga
cgggtgtcgcagtacttcacagcctccgagacgcggcgccggatggacgagatggtccgg
gtcgcaacaggggtgaaagcccgagaatgctcgactcgtcttgaggcgggagtgcgagag
ctacgtctcattgacgcccaccggccgcggtacaaccgtcgttcgcgtcgccaagggtcg
gtgtggtgggtcaccctcactgacgaagctcatccccgcccctctgtgatgcaacgggcc
catcgcggttcacagccgccgtggggaccgttcacgagtcgtcgagcggcaactcgcgcc
gccatcgtcctcgctgaagcgtttggccttcgacagtgcagcggatcactgtcacgtcat
cctgacgggtgcccgttggcggagatgggacggtgctcagccccttgcctgaatcctgcc
accgactactcagcaatcgtcgaccgcactcgcacggccatgacctcggacgtccgtgat
ctcacagatcggcttgcggaacgaatcgcccacctgtccgacgccgagcgcttcgaggag
gccgcagaatacaccgaggacgcccgagaagcgctgagggcaacccgacgacgtgcccgg
ttgacgtccttggcgtcctgtcgccagatcgtggcggctcggcgggaaggcgctttctgg
gagattcacgtcgtccgacatggccgactggctggagcaggacgatgcagcacaggaacc
gaccccatgcccaccatcgatgcgatctgcgcaacggcggagagcgtcgcccctccccca
gcaggtctaccggcatgcaccatcgaggaagccgagttggttgcatcatggtttgaagaa
cctggggtccggctcgttgacatcaccggggaatggtcatggccagcccactgttggatg
tccacggaagaactcgccgtgcgagtagccgcctcacaccacccaggtgacgacgagggc
ggcgagacagaccgcgaggattgccaatcccgccccgagctggcgacggtgtga
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