Cutibacterium avidum: PALO_09360
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Entry
PALO_09360 CDS
T02632
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pra
Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_09360
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_09360
Enzymes [BR:
pra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PALO_09360
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Topoisomerases
PALO_09360
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PALO_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AGJ78468
LinkDB
All DBs
Position
complement(2025379..2028165)
Genome browser
AA seq
928 aa
AA seq
DB search
MSPTKSLVIVESPHKATMIAGYLGPKYTVRASQGHVRDLPTSASEVPAKYKGQSWARTGV
NVDDEFTPIYVVSPEKRSTIRELKGLLKESDELLLATDGDREGEAIAWHLLDELKPKVPV
RRMVFNEITEKAINEAVANTRELDTDLVDAQETRRILDRLYGYEVSPVLWKKVLPRLSAG
RVQSVATRLVVDRERERMAFTSANYWDMEAVLAAKSDEFNARLVALDDTKIAAGRDFDSH
GDLTSKVRRLDEATATTIAKALEKASFSVTKVESKPYTRRPYAPFRTTTLQQEAGRKLGF
TSQRTMSVAQELYEGGYITYMRTDSVALSQEAIRAARSQAAELYGPDHVPDKPRIYASKV
KNAQEAHEAIRPAGEHFRTPAETGLTGDRFKLYELVWMRTLASQMADAKGETLSVTIGAT
PSSPISVADGHVRTATFTASGRTITFHGFLRAYVESVDEGASDDAQKRLPQLSQGQDLDP
REVTANGHDTRPPARYTEPSLVAKLEELEIGRPSTYASIIRTITSRDYVFKKGSALVPTW
LAFAVTRLLEEHFSNLVDYQFTADMEETLDQIARGNADRVAVLSAFYFGQTKSDDGDVPT
PTEGHEGLHQLVTELGDIDARSICTFPIGDSVVVRVGRYGTYVEDSEGNRANVDDTLPPD
ELTIKAAKELLASPNGQDRELGLDPHSHRPIVARNGRFGPYVTEVLDGEATEVVETTTKD
GKKRRTKRKVKPRTASLFKSMNLETVTLDEALKLLSLPRVVGTAADGTEITAQNGRYGPY
LKKGTDSRSLGSEEEIFSITPEQAEAIYAQPKQRGRAAAKPPLRELGEDPTSGRPIVVKD
GRFGPYVTDGETNATLRKDDSVEAITPERAQELLAEKRAKGPARKRTTRKTTTRKTTARK
STTKSTSRSTSSKSTTTKKAAAKSSSGS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgaccaagagcctcgtcatcgtcgagtcaccccacaaggccacgatgattgcc
gggtacctggggcccaagtacaccgtgcgagccagccagggtcacgtgcgagatctgcct
accagcgcctccgaggtgcccgccaagtacaagggtcagtcctgggcgcgcaccggcgtc
aatgttgacgacgagttcactcccatctacgtcgtctccccggagaagcggtcgacgatc
cgtgagctcaagggcctgctcaaggagtccgacgaacttctgctcgccaccgatggtgac
cgcgagggggaggccattgcctggcatctgctcgacgaactcaagcccaaggttccggtg
cgccggatggtcttcaacgagatcaccgagaaggccatcaacgaggccgtcgccaacacc
cgtgaacttgacaccgacctcgtcgacgctcaggagacccgacgcatccttgaccgtctc
tatggctacgaggtctccccagtgctgtggaagaaagtgcttccgcggctgtccgccggt
cgtgtgcagtcggtggcgacccgtctggtcgtcgaccgtgagcgtgaacggatggccttc
accagcgccaattactgggacatggaggccgttctggccgccaagtccgatgagttcaac
gctcgtctcgtcgccctggacgacaccaagatcgctgccggacgcgacttcgactcccac
ggcgacctcacctccaaggtgcgccgcctcgacgaggccaccgcgaccaccatcgcgaag
gccctggagaaggcctcgttctccgtcaccaaggtcgagtccaagccgtacacccgtcgt
ccgtacgctcctttccgcaccacgaccctgcaacaggaggccggccgcaaactcggcttc
acctcccagcgcaccatgtcagtggcccaggagctctacgagggcggctacatcacctac
atgcgtaccgactcggtggccctgtcccaggaggccatccgtgcggcccgcagccaggcc
gctgagctctacggtcccgaccacgtcccggacaagccgcgcatctacgcctccaaggtc
aagaacgcccaggaggcccacgaggccatccgtcccgccggcgagcacttccgcaccccg
gccgagaccggcctgaccggcgacaggttcaagctctacgagctcgtctggatgcgtacc
ctggcctcccagatggctgacgccaagggcgagactctctcggtgacgatcggcgccacc
ccgtcctccccgatcagcgttgccgacggtcacgtcaggactgccaccttcacggcatcc
ggtcgcaccatcaccttccacggcttcctgcgcgcctacgtcgagtcggtcgacgaggga
gcctccgacgacgcccagaagcgcctgccccagctctcgcagggccaggacctggatccg
cgcgaggtgacggccaacggtcacgacacacgtccgccggcccgctacaccgagcccagt
ctggtggcgaaactcgaggagctggagatcggccgtccgtcgacctacgcctcgatcatc
cgcaccattaccagccgtgactacgtcttcaagaagggatcggccctcgtcccgacctgg
ctggccttcgccgtcaccaggctgctcgaggaacacttctccaacctcgtcgactaccag
ttcaccgccgacatggaggagaccctcgaccagattgcgcgcggcaacgctgaccgcgtc
gcggtgctctcggccttctacttcggccagaccaagtccgacgacggtgacgtcccgacg
cccaccgagggccacgagggactgcaccagctcgtcaccgagctcggggacatcgacgcc
cggtccatctgcaccttcccgatcggagactccgtcgtcgtccgggtgggtcgctatggc
acctacgtcgaggactccgagggcaaccgggccaacgtcgacgacacccttccccccgac
gaactcaccatcaaggctgccaaggagctgctggcaagcccgaacggtcaggatcgcgag
ctcgggctggacccgcacagccaccgtccgatcgtggcccgcaacggccgtttcggtccc
tacgtcaccgaagtgctcgacggcgaggccaccgaggtcgtcgagacgaccaccaaggac
ggcaagaagcgtcgcaccaagcgcaaggtgaagccgcgcaccgccagcctgttcaagtcg
atgaatctcgagaccgtcaccctcgacgaggctctcaagctgctctccctgccacgcgtg
gtgggcacggccgccgacggcaccgagatcaccgcccagaacggacgctacggcccgtac
ctcaagaagggcaccgactcgcgctccctgggcagcgaggaggagatcttctccatcacc
ccggagcaggccgaggccatctacgcccagcccaaacaacgcggtcgcgcggccgcaaag
ccgccgctgcgtgagctcggcgaggacccgacctccgggcgtccgatcgtcgtcaaggac
ggccgtttcggcccttacgtcaccgacggcgagaccaacgcgaccctgcgcaaggacgac
tcggtcgaggccatcactcccgagcgcgcacaggagttgctggccgagaagagggccaag
ggcccggccaggaagaggacgacgcggaagacgaccacccgtaagaccactgcgaggaag
tcgacgaccaagtccacctcgaggtccacgtcttccaagtcgaccacgacgaagaaggca
gctgcgaagtcgtcgtcaggaagctga
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