Cutibacterium avidum: PALO_10500
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Entry
PALO_10500 CDS
T02632
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pra
Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_10500
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_10500
Enzymes [BR:
pra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PALO_10500
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Topoisomerases
PALO_10500
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PALO_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGJ78692
LinkDB
All DBs
Position
complement(2302926..2304998)
Genome browser
AA seq
690 aa
AA seq
DB search
MSQPEMPESVTDGDTPEDLLIDATDHPDVLDSDLSPTTVDGSYDAGQITVLEGLEAVRKR
PGMYIGSTGERGLHHCVYEIVDNSVDEAMAGYCDTIQVELLDDNWCQVTDNGRGIPVKEH
PVEHIPTVTLVLTKLHAGGKFGNGGYKVSGGLHGVGSSVVNALASHFVVEVRRDGYHWRQ
SFSLGEPDGPLEQLEALGPDEHEGTTVRFQPSDEIFDSIVFEYETLSNRFREMAFLNKGL
RIMLTDRREGHVDEDGNPIHEDFLYNEGLKDYVRFLTGTRDVINPTIISLESHRPEEGMG
LEIAMQWNTSYTTSVHTFANAINTIEGGAHEEGFRAALTNTVNRWGETWGLIKKREDRVS
GDDIREGLTAVVSIKLTEPQFEGQTKTKLGNAEAKSFVQKALNEKLSDWFEENPNEGKNI
VRKSQAAAQARVAARKARDLARNRKGLLGSTSLPGKLKDCSSTNPEECEIFIVEGDSAGG
SASQGRDPRIQAILPMRGKILNVEKARLDRALSSETIESIINALGTGVHEDFDLDKLRYH
KIILMADADVDGAHIRTLLLTLLFRFMRPVIDAGHVYLAQPPLFRLRWTNSPHELAYSDE
ERDLLRQDGLAHGKKLPQVNPIQRYKGLGEMDAEDLWDTTMDPDKRLLLQVTLEDAALAD
QMFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagcccgagatgcccgagtccgtgaccgacggggacacccccgaggaccttctc
atcgacgccaccgatcatcctgacgtccttgactcggatctttccccgacgaccgtcgat
ggatcctatgacgccggtcagatcactgtcctggaaggtctggaagccgtccggaagcgt
cccggtatgtacatcggttccaccggtgagcgcggtctgcaccactgcgtctacgagatc
gtcgacaactcggtcgacgaggcaatggccggttactgcgacaccattcaggtcgagctg
ctcgacgacaactggtgccaggtcaccgacaacggacgtggtatcccggtcaaggagcac
cccgtcgagcacatccctaccgtcaccctggtgctgaccaagctgcacgccggcggcaag
ttcggcaacgggggctacaaggtctccggcggtctgcacggcgtcggttcctcggtcgtc
aacgccttggcctcccatttcgtcgtcgaggtgcggcgtgacggctaccactggcgtcag
tccttcagcctgggcgagccggacggcccgttggagcagctcgaggcccttggccctgac
gagcacgagggcaccacggtgcgcttccagccctccgacgagatcttcgactccatcgtc
ttcgaatacgagaccctgtcgaaccgcttccgcgagatggccttcctcaacaagggactg
cggatcatgctgactgaccgccgtgaaggtcatgtcgacgaggacggcaatcccatccac
gaggacttcctctacaacgagggcctcaaggactacgtccgcttcctcacgggcacccgc
gacgtcatcaatcccaccatcatctccctggagtcccatcgtcctgaggagggcatgggt
ctggagatcgcaatgcagtggaacacctcgtacaccactagcgtccacaccttcgccaac
gccatcaacaccatcgagggtggcgcccacgaggagggcttccgtgccgctctcaccaac
accgtcaaccggtggggcgagacctggggactcatcaagaagcgtgaggaccgcgtctcc
ggtgacgacatccgcgagggactgaccgccgtcgtctccatcaagctcaccgaaccgcag
ttcgagggccagacgaagaccaagctcggtaacgccgaggccaagtccttcgtccagaag
gctctcaacgagaagctctccgactggttcgaggagaaccccaacgagggcaagaacatc
gtccgcaagtcccaggcggccgcccaggcgcgtgtcgcagctcgcaaggcccgcgacctg
gcccgtaaccgcaagggtctgctgggctcgacctccctgccgggcaagctcaaggactgc
tcctcgaccaacccggaggagtgcgagatcttcatcgtggagggtgactccgccggtggc
tcggcctcccagggtcgcgacccgcggatccaggcgatcctgccgatgcgaggcaagatc
ctcaacgtcgagaaggcccgtctcgaccgcgcgctgagctcggagaccatcgagtcgatc
atcaacgcgctgggaaccggcgtccacgaggacttcgatctggacaagttgcgctaccac
aagatcatcctcatggctgacgctgacgtcgacggcgcgcacatccgcaccctgctgctg
accctgctgttccggttcatgcgcccagtcatcgacgccggtcacgtctacctggcccag
ccgccgctgttccggctacggtggacgaactctcctcacgagttggcctactctgacgag
gagcgtgacctgctgcgtcaggacggtctggcccatggcaagaagctgcctcaggtcaac
ccgatccagcgctacaagggtctgggcgagatggatgccgaggacctgtgggacaccacc
atggaccccgacaagcgtttgctgctccaggtgaccctcgaggacgccgccctggccgac
cagatgttctccatcctcatgggtgaggacgtcgagcagcgccggtccttcatccagcgc
aatgccaaggacgtccgcttcctcgacatctga
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