Cutibacterium avidum: PALO_11135
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Entry
PALO_11135 CDS
T02632
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pra
Cutibacterium avidum
Pathway
pra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PALO_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_11135
Enzymes [BR:
pra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PALO_11135
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PALO_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Peptidase_S8
Motif
Other DBs
NCBI-ProteinID:
AGJ78808
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All DBs
Position
2448796..2449734
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AA seq
312 aa
AA seq
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MTMLVAIPSNLRHSGDGHHLQMDFRWRSAEANSVSHGTVGSSWHSVGMTKWIIGGHVDTA
DAVAQAAARGADIAQISLGDPQSWKKPVCGFPGGAQALKEAAEEAGLKLVVHSAFVINVA
SLNNRIRIPSRKLLQQTLDAAAEVGATGVVVHGGHVRAGEPIEKGQDNWRKAIDGFEFPV
PLLVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTCHAFAAGLDMTTLVDDV
RGITGRIDLVHANDSQGPAGSGRDRHANLSEGECGADALVDVIRAADAPVVVETPGDAEG
QARDIDWLRERL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgttgccataccttccaatctacggcactcgggggacggtcaccatctt
cagatggactttcgttggcgttccgctgaagcgaacagcgtcagtcacggaacggtcggt
tcctcgtggcacagtgttggcatgaccaagtggatcattggcggtcatgtcgacaccgcc
gacgccgtggcacaggcggcagcacgcggagccgacatcgcccagatcagcctgggggac
ccgcagtcctggaagaagccggtctgcggctttcccggaggtgcccaagccctcaaggag
gctgctgaggaagccgggttgaagctcgtggtgcactcggccttcgtcatcaacgttgct
tccctcaacaaccgcatccgcattcccagccgcaagctgttgcagcagacccttgacgcc
gccgccgaggtgggggcgacaggcgtcgtcgtccatggtggtcacgtacgcgccggggag
ccgatcgagaaggggcaggacaactggcgcaaggccatcgacggcttcgagttcccggtg
ccgctcctcgtcgagaacaccgctggcggggacaacgcgatggctcgcttcctggagaga
ctgtcagggacctgggaggccatcggtgccgcgtcaggtcatgagaatgtcgggttctgt
ctggacacctgtcacgctttcgcggctggtctcgacatgacgacgttggttgatgacgtc
cgtggaatcacgggtcggatcgacctcgtgcatgccaatgactcgcaaggaccggctggt
tccggacgggatcgccacgccaacctgagtgagggggagtgcggggccgacgccctcgtc
gacgtcatccgtgctgcggacgctccggtcgtcgtcgagacaccgggggatgccgagggt
caggcgcgcgatatcgactggctgcgggagcgcttgtga
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