Psychrobacter raelei: MN210_05895
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Entry
MN210_05895 CDS
T10149
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
prae Psychrobacter raelei
Brite
KEGG Orthology (KO) [BR:
prae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prae03032
]
MN210_05895
03400 DNA repair and recombination proteins [BR:
prae03400
]
MN210_05895
Enzymes [BR:
prae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MN210_05895
DNA replication proteins [BR:
prae03032
]
Prokaryotic type
DNA Topoisomerases
MN210_05895
DNA repair and recombination proteins [BR:
prae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MN210_05895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UNK06153
UniProt:
A0AAT9PF62
LinkDB
All DBs
Position
1116016..1117125
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AA seq
369 aa
AA seq
DB search
MTTSRLPSTNAASNIGQTDLRHDYQALAARARLRYVSDEQPGFTRKRWGKGFTYKDALGN
TVKDPSLRSRFDALAIPPMWSEVWICEYEDGHLQCTGRDEKGRKQYLYHEQWNQVRDMAK
FDAVMGFGDVLPKLRAQVEQDLAAPALSRANVLAAVVKLLETTLIRIGNDRYAKQNNSYG
LSTLRSRHVTETEEGLAFDFVGKSSKAHHIELQDERLVDIVQACSDLPGYRIFKYIDEAG
EKQVVESGDINEYLRTHTGYEYSAKDFRTWMATVLAAAYLYEYADDEVLASEPDSKLRQQ
LVVDMVKEVARNLGNTPSVSRTSYIHPKIIERFLQDSFMDAYKQGRRGRSKKYQSLDEKA
VLALLTTNE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgcgtttaccgagcacaaatgctgcgtccaatataggacagacagatttg
cgccatgattatcaagcactggcagcacgtgcccgccttcgttatgtgagcgatgagcag
cctggcttcactcgcaaacgctggggcaaaggctttacttataaagatgcgctgggcaat
acggtaaaagacccatcactacgcagccgttttgatgctttggccatcccgcccatgtgg
tctgaggtgtggatttgtgagtatgaggatgggcacctgcaatgtacaggccgtgacgag
aaaggtcgtaaacagtatttatatcacgagcagtggaatcaggtacgcgatatggccaag
tttgatgcggtaatgggatttggtgacgtgctgcctaagctgcgcgcacaagttgagcaa
gatcttgcggcgccagcgcttagccgtgctaacgtattggcggcggtagtaaaactactt
gaaaccaccttaattcgtatcggcaatgaccgctatgctaagcaaaacaacagctatggt
ctgagcactttgcgcagccgtcatgtcactgagactgaggaggggcttgcttttgacttt
gtcggaaaaagctctaaagcgcatcatattgagctgcaagatgagcgtttagttgacatt
gttcaggcgtgttctgatttaccaggctatcgcatttttaaatatatcgatgaagctggt
gagaagcaggtggtcgagagcggtgatatcaatgagtatctgcgtacccatactggttat
gagtatagcgctaaagacttccgcacttggatggcgacggtgctggcggccgcttatcta
tatgagtatgccgatgatgaggtgctggcaagtgagcctgacagtaagctgcgtcaacaa
ttggtggttgatatggttaaagaggtggcgcgtaatttgggcaatacgccaagtgtctcg
cgcacctcttatattcatcccaaaattattgagcgctttttacaagacagctttatggac
gcttataagcaggggcggcgtggccgtagcaaaaaatatcaatcgcttgatgaaaaagca
gtgttggcattgttaaccacaaacgagtaa
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