Psychrobacter raelei: MN210_14075
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Entry
MN210_14075 CDS
T10149
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
prae Psychrobacter raelei
Pathway
prae03020
RNA polymerase
Brite
Enzymes [BR:
prae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MN210_14075 (rpoC)
Transcription machinery [BR:
prae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MN210_14075 (rpoC)
DNA repair and recombination proteins [BR:
prae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MN210_14075 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UNK05116
UniProt:
A0AAT9PEA9
LinkDB
All DBs
Position
complement(2649965..2654185)
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLLDIMKSPADNGKREFDSIQITLAAPETIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGVICEKCGVEVTTAKVRRDRMGHIDLASPVAHIWFLK
SLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTSLEKYQLLDDEDYYKALEEFGDEFIA
KMGAEAVQDLLKDIDIDLEIDDLREAIPNTGSETKLKKMSKRLKLLEAFRDSNNKPEWMV
MSILPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRM
LQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYSKLLSHGMATTIKQAKKMVEREEPQVWDMLAMVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLTLEAQL
EARTLMMSTNNILSPANGDPIIVPSQDVVLGLYYISRSAVNAKGEGMIFATVNEALRAIG
SNDLHVNAKIKVRVTETIFDEEGNSTKQTTLQETVAGRLLIWNVMPKGMRFAECNVEMTK
KNISKLMNSCYRTRGVKESVIFADQLMYLGFAQATLSGVSIGIEDMVIPPMKKELIEAAD
AEVREIEQQFEQGFVTAGERYNKVVDIWSRTNDKVAKAMMDNLATDIVINAQGEEEEQKS
FNSIFIMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLSVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVAQDLVITENDCGTEKGVRMTPHIQGGEIIEKLGDR
VLGRVVARDVMSREDEVLLAAGTLIDEHGVTVIDDNGIDEVWVRSVITCDVPHGVCAQCY
GRDLARGHKVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASSTSVDNSISARNTGFIR
FHNMKTVDHVDGHLVIVSRSAEIGIADDVGRERERYKVPYGSSVLVKDGDEVESGQAIAK
WDPHTHPIITEFAGKARFSDIIDGSTATVKIDEATGMSSFEILGSKDRPSNSKDLRPAII
LDTTGGKEVVYFLPAETIIRVSDGEEVTAGSVLGRVPQATSGTKDITGGLPRVADLFEAR
RPKDHAIMAEMSGVVSFGSSTKGKNRFIITNEDGEVHEELIPKWRQINVFENETVARGEV
IADGPLNPHDILRLQGETALANYIVDEVQDVYRLQGVKINDKHIEVIIRQMLRKVEITDA
GDSNYFKGDQVEYADVKATNEKLLAEDKFPVQFERQLLGITKASLATESFISAASFQETT
RVLTAAAVEGKVDELRGLKENVVVGRLIPAGTGLAYHAARKKAKEGKPAYDVESALDAAF
DIEATTSAQDFRSFDEAFAQELSQDK
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttactcgatattatgaaaagccctgccgacaacggcaaacgtgaatttgat
agcattcagattacattggcagctcccgagactattaaatcatggtcacatggtgaagta
aaaaaaccagaaaccattaactaccgtacctttaagcctgagcgtgacggtctattctgt
gccaaaatctttggtccagtaaaagactttgaatgtttatgtggtaagtacaagcgccgc
aaattccaaggcgtaatctgtgaaaaatgtggcgtagaagtgaccactgccaaagttcgt
cgtgaccgcatgggccacatcgatcttgccagccctgttgcgcacatttggttcttaaag
tcattaccaagccgcatcggtttattacttgatatgacactacgtgatatcgagcgcgta
ttgtattttgaaagctatgtggtaaccgatcctggcatgacgtctttagagaagtatcag
cttcttgatgatgaagactactacaaagcattagaagaatttggtgatgagttcatcgct
aaaatgggtgctgaagcggttcaagatctgttaaaagatatcgatatcgatttagaaatt
gatgatctacgtgaagcgattccaaatactggttctgaaaccaagcttaaaaagatgtct
aagcgtctaaaattattagaagctttccgtgactctaataacaagcctgagtggatggtt
atgagcattttgcccgtactaccaccagatttacgtcctctagtaccgctagaaggcggc
cgttttgcgacctcagatctaaacgacttatatcgccgtgtgattaaccgtaacaaccgt
ttaaagcgtctattagagcttaacgcccctgacattatcgtacgtaacgaaaaacgtatg
ctacaagagtcagtggatgcgctacttgataacggtcgtcgtggccgtgccatcacgggc
agcaacaagcgtccattaaaatcgcttgctgacatgattaaaggtaagcaaggtcgtttc
cgtcaaaacttactaggtaagcgtgttgactactctggccgttcggtgattgttgttggt
ccaacactgcgtctacatcagtgtggtctgcctaagaaaatggcacttgagctattcaag
ccatttacttactcaaaactattgtcacacggcatggcaacaaccatcaaacaagcgaag
aagatggtagagcgtgaagagccacaagtttgggatatgctggccatggttatccgtgag
catccagtattactaaaccgtgcgccaacgctacacagattgggtcttcaagcatttgag
cctgtactaattgaaggtaaagccattcagctgcatccgctggtatgtaccgcgttcaac
gctgacttcgacggtgaccaaatggcagtacacgtgccattgactctagaagcacagcta
gaagcccgtacgttgatgatgtcaaccaacaacatcctatcacctgctaacggtgatccg
attattgtgccatcacaagacgttgtactgggtctgtactatatcagccgttcagcagtt
aacgctaaaggcgaaggcatgatctttgcgaccgttaacgaagcattacgcgctattggt
tcaaacgacttacatgtaaacgccaaaattaaagtacgtgtgactgagaccatctttgat
gaagagggtaactcgaccaaacaaaccacgctgcaagaaactgtggccggtcgtctactt
atctggaatgtcatgccaaaaggtatgcgttttgctgagtgtaacgttgagatgactaag
aaaaacatctcaaaactaatgaactcttgctaccgtacgcgcggcgtgaaagaaagtgtt
atcttcgctgaccaattaatgtacctaggttttgctcaagcaaccctatcaggtgtgtct
attggtatcgaggatatggttatcccgccaatgaaaaaagagcttatcgaagcggctgat
gctgaggttcgtgaaatcgaacaacagtttgagcaaggtttcgtaaccgctggtgagcgc
tacaacaaagttgtcgatatctggtcacgtaccaacgacaaagtggctaaagcgatgatg
gataacttggcgactgatatcgttatcaacgcacaaggtgaagaagaagagcaaaaatca
ttcaactctatcttcatcatgtcagactctggtgctcgtggtagtgcggcgcagattcgt
cagttggccggtatgcgtggtctaatggctaagccagatggctctattattgaaaccccg
attaaggccaacttccgtgaaggtctatcggttcttcagtacttcatctcgacccacggt
gcgcgtaaaggtcttgccgatacggcacttaagacagccaactcgggttacttgactcgt
cgtctggttgacgtggcgcaagatttggtaatcactgagaacgattgtggtaccgaaaaa
ggcgttcgcatgacaccacacattcaaggcggtgaaattattgagaaactaggtgaccgt
gttctaggtcgtgtggttgctcgtgatgtgatgagccgtgaagatgaggtgttattagcc
gcaggtacgctgattgatgagcatggcgtaacggttattgatgacaatggtatcgatgaa
gtatgggtacgctcagtcattacttgtgatgtaccacacggtgtgtgtgctcagtgttat
ggccgtgacttggcacgtggtcacaaagtgaatattggtgagtctgtgggtgttatggcc
gctcagtcaatcggtgagccaggtactcagttaaccatgcgtacgttccacgtgggtggt
gccgcaagttctacttcagtagacaatagcatctctgcccgcaacacaggtttcatccgc
ttccataacatgaagacggtggaccacgtggatggtcacttagttatcgtatcgcgttca
gctgaaatcggtattgctgatgatgttggccgtgagcgtgagcgctataaagttccttat
ggttcaagcgtactggtgaaagacggtgatgaagttgaaagcggacaagcgattgctaaa
tgggatccgcacacgcacccaattatcacagaattcgcgggtaaggcacgtttcagcgac
attatcgatggctcaactgccaccgttaagattgatgaagcaaccggtatgagctcgttt
gaaatcttgggttcaaaagaccgtccaagtaactcaaaagacttacgtccagcgattatt
ctagatactacgggcggtaaagaagtggtttacttcttacctgctgagaccattatccgt
gtttctgatggcgaagaagtgacagcaggttcggtattaggccgtgtaccacaagccacg
tcaggtaccaaagatattaccggtggtctaccacgtgttgctgacttgttcgaagcacgt
cgtccgaaagatcatgccatcatggcagagatgtcaggtgtggtaagcttcggctcatca
actaaaggtaagaaccgcttcatcatcactaatgaagatggcgaagtacatgaagagctg
attccaaaatggcgccaaatcaacgtgttcgagaacgaaacagttgcccgtggtgaagtt
attgcagatggcccattaaatccgcatgacatcttacgtctacaaggcgaaactgcgctg
gctaactacattgtggatgaagtgcaggatgtataccgcttgcagggcgttaagattaac
gataagcacattgaagtgattatccgtcagatgttgcgtaaagtagaaattactgatgcc
ggtgattcaaactacttcaagggcgatcaggtggaatacgctgatgtgaaagccactaac
gaaaaactgcttgctgaagataaattcccagtacagtttgaacgtcagttattgggtatc
accaaagccagcttggcaactgaaagcttcatctcagcggcttcgttccaggaaaccaca
cgcgtattaactgctgctgctgttgagggtaaagttgatgagctacgtggtctaaaagaa
aacgtggttgtgggtcgtctgatcccagcgggtacaggtcttgcttatcatgcggcgcgc
aaaaaagccaaagaaggcaaacctgcttatgatgttgaaagtgctctagatgccgctttt
gatatcgaagccacgacctcagctcaagacttcagaagcttcgatgaagcgtttgctcaa
gagttgagtcaagacaaatag
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