Podarcis raffonei (Aeolian wall lizard): 128398276
Help
Entry
128398276 CDS
T09310
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04621
NOD-like receptor signaling pathway
praf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128398276 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128398276 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
praf04054
]
128398276 (NOD1)
Pattern recognition receptors [BR:
praf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128398276 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
LRR_4
NOD2_WH
RNA_helicase
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
128398276
NCBI-ProteinID:
XP_053215126
LinkDB
All DBs
Position
12:45410359..45453649
Genome browser
AA seq
950 aa
AA seq
DB search
MEAQPRSNGEILQQGPLAARPPSFVNLLKVHRELLVGKVRNTQCLIDNLIKNEYFSTEDA
EIAAQYPTQADKVRKILDLAQSKGEEVAEYCLYILQQVADAYYELQPWLEEIGFRPSEVV
GNKPVENTDPVSRYRQKLKDELGRDTKFIMSYAQKEDMLLEEIYSSNIMEFIKDNNEKLS
NVNSLEDLLDVNVGLINEAGEVIYIFGDAGIGKSILLQKMQNLWSKSKLDVGAKFFFRFR
CRMFSCFKQDEAICLKDLLFKYNCFPDQDPEEVFDFIVKFPHTVLFTFDGFDEIHSDFDL
NSVPEICSPTESIHPLALLVGLLSGKLLKGSQKVLTARTGTDVHRNIVRKKVHLLGFSSS
NLKEYTKMFFKDEGCRTLVLNQLEANPNLSSLCLVPLFCWIIFKCFDHFHSAFDSHELPD
FTVTLTDIFLLMTEVHLNRIQKTNLLKKNNRSQVETYRSNKETLFALSRVAHAAMQKSLF
VFDQEEVLANLSEQELQLGFLRVSDYGGRGDQVSYEFLHLTLQSFFTALHLVTDEKVSAK
DLLRFFAECSTSDATLRSCFPIAWLKKHHPTGEDPFRNNEHFHFTNLFLCGLLSKSKQKL
LQHLVSPASLKRKRKVLLTYFFESMKSHLKGLTRARLKEYRQIQVMPNFVWMLRCIYETQ
SEKVGMGVAKGMGANYIKLTYCNVYSADCSAISFTMHHFRKRLALDLDNNNINDYGIKQL
MPCFSRLAVLRLSVNQITDQGVRVLYDEMSKYRIVSYLGLYNNQITDVGAKYVARLIEEC
PSLIYVKIGANRITTEGGKCLADAIRKSKTMYEIGMWGNQVGDEGAKAFAEALQNHPSIT
NVSLAFNGITTEGGKSIAEAMKHNSTVNIFWLTKNELDDEAAECFAEMVKVNKRLGHLWL
IQNQITTRGAKCLADALKHNTAIKEICLNGNLISQEDAKTFEDERRLVLF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcagccccgcagtaatggagagattcttcagcaaggccctttggcggcccgt
ccgccgtccttcgttaatttgctgaaagtgcaccgagagctgctggttggcaaagtccgt
aatacccagtgtttgattgacaacttgatcaagaatgaatacttctctaccgaggatgca
gagattgcagcgcaatatcctacgcaagcagacaaggtccgcaaaattttggatctcgcg
cagagcaaaggagaagaagtggcggaatactgcctctatatactgcagcaagttgcagat
gcttattatgagctgcagccgtggctagaagaaattgggtttcgcccttcagaggtcgtt
ggtaataagcccgttgaaaatactgacccagttagcaggtaccgtcagaaacttaaagat
gaattgggccgagacacaaagttcatcatgtcgtatgcccagaaggaggacatgttgctt
gaggagatttattcctccaacatcatggagtttatcaaggacaacaacgagaaactcagc
aacgtgaatagcttggaggacctgctggacgtcaacgttggtctgatcaatgaagctgga
gaggtgatctatatctttggtgatgcagggattgggaagtccattctcttgcaaaagatg
caaaacctctggtccaagagcaaactcgacgtaggggccaaattcttctttcgtttccga
tgccggatgttcagctgcttcaaacaggatgaagccatatgtttgaaagacctcctgttc
aagtacaactgtttcccagaccaggacccagaagaggtatttgacttcatcgtgaagttc
cctcacacggttctgttcaccttcgacggctttgatgagatccattctgactttgacctc
aacagcgttccagagatctgctcccccactgaatcgatccacccgctggctttgctggtg
ggtctcctcagcgggaaacttctgaagggatctcagaaagtcctgactgccaggacaggg
acggatgttcatcggaacattgtccggaagaaggtacatctcctagggttttccagcagt
aacctgaaagaatacacgaaaatgttcttcaaagacgaagggtgcaggaccttagtcctg
aaccagctggaagccaacccaaatctgagcagcctctgcttagtgcctttattctgttgg
attatcttcaaatgctttgaccacttccactcggccttcgacagccacgagctcccggat
ttcaccgtgaccttgaccgatattttcttgctcatgaccgaagtccacctcaaccggatc
cagaagaccaacttgctgaagaagaacaacaggagccaagtggagacctaccggtccaac
aaagagacgctgtttgctctgagcagagtggcccacgcggcgatgcagaaatctctcttt
gtctttgaccaagaggaagtccttgccaacctctctgagcaggagctgcagctgggtttc
ctcagggtttccgactacggtggccgcggagaccaagtttcctacgagttcctgcacttg
accttgcagtccttcttcaccgctttgcatctggtcaccgatgagaaggtgagcgccaaa
gatctgctccgtttttttgccgaatgctccacctcggacgccaccctgcgttcttgcttc
ccaatcgcttggctgaagaagcaccacccgacgggagaggaccctttccggaacaacgag
cacttccacttcaccaacctcttcctctgcggcttgctgtccaagtcgaagcagaagctc
cttcagcacttggtttctcccgcgtcccttaagaggaagaggaaagtgctcctcacctat
ttctttgaaagcatgaagtcccacctgaagggactaacccgggcgaggctgaaggaatac
cggcagattcaagtgatgcccaatttcgtatggatgttgaggtgcatctatgagactcag
agcgagaaggtgggcatgggcgtggccaagggcatgggcgccaactacatcaagctcacc
tactgcaacgtctactctgccgactgcagcgccatctcgttcactatgcatcatttccgg
aagcgcctggccctggacttggacaacaacaacatcaacgattacgggataaagcagctg
atgccttgtttcagtaggctggcagtactccggttaagcgttaaccagatcacagaccaa
ggagtcagagtgctttacgacgagatgtccaagtacagaattgtgagttatttgggcttg
tacaacaaccagattaccgacgttggagccaagtacgttgcaagactcattgaggaatgt
ccaagcctcatatatgttaaaataggagcaaacagaataaccacagagggagggaaatgt
ctcgctgatgccatccggaagagtaaaacgatgtatgagattgggatgtggggcaatcag
gttggagacgaaggtgccaaagcctttgcagaagcactgcagaatcaccccagtataaca
aacgtcagtcttgcgtttaacggcatcaccaccgaaggggggaaaagcatcgcagaagcc
atgaagcacaacagcaccgtgaatatattttggctaacgaagaatgagctggatgacgaa
gcagccgaatgctttgccgaaatggtaaaggtcaacaagcgattgggtcatctatggctt
atccagaatcagattaccactagaggtgccaagtgcctggcggatgctctcaagcacaat
acggccattaaagagatctgcttaaatggaaacctaataagccaagaggatgcaaaaact
tttgaagatgaaaggaggctcgttttgttttga
DBGET
integrated database retrieval system
