Podarcis raffonei (Aeolian wall lizard): 128398340
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Entry
128398340 CDS
T09310
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
praf03037
]
128398340 (NPHP3)
Cilium and associated proteins [BR:
praf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128398340 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_14
NPHP3_N
TPR_11
TPR_6
AAA_16
KAP_NTPase
AAA_22
NACHT
14-3-3
DUF2225
AAA_14
AAA_19
T2SSE
Viral_helicase1
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
128398340
NCBI-ProteinID:
XP_053215311
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Position
12:complement(46883410..46923967)
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AA seq
1318 aa
AA seq
DB search
MGTASSLVNPIGTVGEVIEDTYEGGGGEACEIPVEVKPKARLLRSSFRRVGTSRPGGLIG
ASFKSTASVQELECMAEYERLKKEYEIFRISKNNEVASMMKKENKLDKENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRDL
EAKLQRLQAQGIQVFDPEESDSDDSCTEVTATGAQTEYWTGGALGSEPSMGSMIQLQQSF
RGPEFAHSSIDVEGPFANVNRDDWDAAVASLLQVTPLFSHSLWSNTIRVYLISTEETQQE
VDIFIQKYSPKLRKYCETMEYFFQAVHFPVETESTFQAVRKWEIEKSSLAILFLHLNLPS
CLLDECEEAFLKNPEGKPRLICHRLEDGQVGSDSVQRLVEQVRFVNKTKIISHMGGEEEG
AREVYNYVEKTIKQDILGCEITQLERKGATDSAEPSIPEEEIFGDVLWDAHDEQEQMEAF
QQASSSTSELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNT
LILYHFVGKPLSSSSEPALILRRLTLKLMQHSWSVSPLTLDPVKLLEEFPRWLEKLSAHH
QGGIIIIIDSIDRIQQAEKHMKWLIDPLPVNVRVVVSVNVETCPPAWRLWPTLHLDPLNA
KDVKSLINEECSCADLKLTKEQEKKLEKHGHSATTCNALYVTLLGRMMAGAGSAEDIDVI
LQRFLQCQDTVSLYKLVLNSVEESLKSEKDKNLMKEILCLISVSHNGVSESELMELCPAL
SWEVLASLVYSLHKMCFLTYGCGLLKFRHLQAWETVKLQYMEEEGQNVFATFREKLIDYF
TMQLSEERVTWRSADELPWLFQQQGDRQKLQKCLLNLFVSQNLYKRGHFAELLSYWQLLG
KDKSSMAAEYFSSLKLYEQSCEGEESMISLADLYETLGRFLKDLGLLSQAIAPLQRSLEI
RETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGTEHLRVARELDA
LAMLYQKQNKYEQAEQLRKKSLKIQQKAVRRKGSLYGFALLRQRALQLEELTLGKDTSDN
ARTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGPDHPDCAQSLNNLAALSNEKKNYD
KAEELYERALNIRKRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFG
PKHPSVATALVNLAVLYCQMKKHSEALPLYERALKIYEDSFGRMHPRVGETLKNLAVLSY
EGGDFEKAAELYKRAMEIKEAETLLIGGKAASRHSSSGDTLSLKSAFSPNVFLQHGQR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgcttcatcgttggtgaaccccatcggcacggtcggggaggtgattgaagac
acctacgagggaggtggtggcgaagcttgcgagatccccgtggaggtgaagcccaaagcc
cgccttctgcgcagctccttccgccgtgtggggacgtcgcggcctggaggcctcatcgga
gccagcttcaagtccacagcgtccgtacaggagctggaatgcatggcagagtacgagcgg
ctgaaaaaggagtacgagatcttccgcatcagcaagaacaacgaggtggcctctatgatg
aaaaaggagaacaagctggataaggagaacaagagacttcgggcagagctacaggcactt
cagaaaacctatcaaaagatactccgggagaaagaaagtgctctagaggccaagtatcaa
gccatggagagagcagctacattcgaacacgaccgggacaaagtcaagaggcagttcaag
atttttagagaaaccaaggaaaacgaaattcaggatttactgagggctaagcgggatctg
gaggcaaaactgcagaggctgcaggcccagggcatccaggtctttgatcctgaggagtcg
gattcagatgatagctgcactgaggttaccgccactggagctcagaccgaatattggact
ggcggagctttgggaagcgagccttccatgggcagcatgatacagcttcaacagtccttc
cgaggccctgagtttgcacatagctccatagatgtggaagggccatttgcaaatgtcaac
agagatgactgggatgcagctgtcgctagtttgctgcaagtcactcccttgttttcccac
tctttgtggagcaatacaattagggtgtatctcatcagtacagaagagactcagcaagaa
gtagacatcttcatccagaaatactctcccaaacttcggaaatattgtgaaacaatggaa
tacttcttccaagctgtccatttcccagtagaaactgaaagtactttccaggctgtgaga
aaatgggaaattgagaaaagctctttagccattttgttcttgcatctaaatttgccaagc
tgcctgctggatgagtgcgaagaagccttcttgaaaaaccctgaagggaagccccggctt
atttgccaccgactggaagatggacaagtcggttcagattctgtgcagcgattagttgag
caagttcgttttgtgaacaaaacaaagatcatcagccatatgggaggagaagaggaagga
gcccgtgaagtctataattatgtggaaaagaccataaaacaggatatactgggctgtgaa
attacacaactggaaaggaagggcgcaacagacagtgctgagccttccattcccgaagag
gaaatttttggagacgtgctgtgggatgctcacgatgaacaagaacagatggaggccttc
cagcaggcgtccagttcaacttctgagcttggatttgagaaatattacgaacgcctgaat
gacttggtggcagccccagcgccaatcccgccccttctcgtgtctggaggaccaggctca
ggaaaatctctccttttgtcaaaatggattcagttgcaacagaagcattcgccaaatact
ctcatcctataccattttgttgggaaacctttgtctagcagttcagagcctgcgctgatt
ctcagacgtctcactttaaagcttatgcagcattcctggtcagtctcacctttgacactc
gatcctgtaaagctattagaagaatttcctcgttggctggagaaactttctgctcaccac
caaggcggcattataataattattgactctattgatcggatccagcaagctgaaaagcat
atgaaatggctcattgaccccctgccagtgaatgtgagggtcgtagtgtccgtgaatgtt
gaaacctgtcccccagcatggaggttgtggccaacccttcatcttgatccattaaatgcg
aaggatgtgaaatctctcattaatgaagaatgcagctgtgcggacctgaaactgacaaaa
gaacaggagaagaagcttgagaaacatggtcattctgctacaacttgcaatgccctgtat
gtcactctcttgggcagaatgatggctggtgctggaagtgcagaagacattgacgtaatc
cttcagaggtttttgcaatgccaagacacagtgtcgctctacaagctagttctgaattcg
gtcgaagaatccttgaaaagtgaaaaagacaaaaacctcatgaaagagatactttgcctc
atcagtgttagtcacaacggagtcagcgaatcagaactgatggaactatgtcctgcgctg
tcatgggaagtgctggcctcgttagtttacagtttgcacaagatgtgctttttgacatac
ggctgtggcttgttaaagtttcgacaccttcaggcttgggagactgtcaagctgcaatac
atggaagaagaaggtcagaatgtttttgctactttcagagaaaaactcatagactacttc
accatgcaactaagcgaagagagagtgacttggaggagtgcagatgaactcccctggttg
ttccagcagcaaggggacaggcaaaagttgcagaagtgcctgctgaatctctttgtgtct
cagaacctttataaaaggggccattttgcagaactgctgagttactggcagcttcttggg
aaagataagagctccatggcggcagagtattttagctcccttaaactttacgagcaaagc
tgcgagggggaagaaagcatgatctctctagctgatctttatgaaactctggggcgattt
cttaaagacctgggtcttctcagtcaggccattgctcctttgcagcgctcgctggagatt
cgggagactgcccttgatccagaccaccccagagttgcccagtcactccatcagttagct
ggcgtttatgtgcaatggaagaagtttggtaatgctgaacagttgtataagcaggctctg
gaaatctccgaaaatgcttacgggactgaacatctcagggtcgctcgtgaacttgatgct
ctcgcaatgttgtatcagaaacagaacaaatacgaacaagctgaacagctaaggaagaaa
tccttaaaaattcagcaaaaagctgtgagacgtaaaggaagcctgtatggatttgctctt
ctgcgccaacgagccctgcagctagaggagctcactttgggaaaagatacgtctgataat
gctcggacgcttaacgagctcggagttctctactacctccaaaataaccttgagacagca
gagcttttcctcaaacgctccctggaaatgcgagagcgtgttctcgggcctgaccaccca
gattgtgcccagtctttgaataatctagcagccctcagcaatgagaagaagaactacgac
aaggcagaggagctgtacgaaagggcactgaacatcaggaaaagagcgctggccccagac
cacccgtctctggcttacacggtgaaacaccttgctgtgctgtacaagaagatgggaaag
cttgacaaagctgttcctctgtacgagctggctgttgaaatcaggcagaaatcttttggt
ccaaagcacccgagtgtggccactgctttagtgaacttagcagttctttactgccagatg
aaaaagcactctgaagccttgcctctttacgaacgagcgctgaaaatttatgaagacagc
tttggtcgtatgcatcctcgtgtgggagaaacattaaagaatttggctgtgcttagctat
gagggaggagattttgagaaggctgctgaactctataagagagccatggaaatcaaagaa
gcagagactttgttgattggcggcaaggcagcgtcccgtcattcatccagtggagacacc
ctcagtttgaagagtgctttctctcccaatgtttttttgcaacacggacaaaggtga
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