Podarcis raffonei (Aeolian wall lizard): 128398442
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Entry
128398442 CDS
T09310
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase isoform X1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128398442 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
praf01007
]
128398442 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
praf03016
]
128398442 (GARS1)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128398442 (GARS1)
Enzymes [BR:
praf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
128398442 (GARS1)
Amino acid related enzymes [BR:
praf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128398442 (GARS1)
Transfer RNA biogenesis [BR:
praf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128398442 (GARS1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128398442 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
128398442
NCBI-ProteinID:
XP_053215490
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All DBs
Position
12:complement(8312560..8340430)
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AA seq
760 aa
AA seq
DB search
MPWPLSVLRAASLGRLRSSSSIRSLLLSPLASLGLQPSPAGRTLVTRRPGSPSAVPAASS
SSSSPSQWTSNPGAGMDGPAAEALLAPLRQAVRQQGELVRKLKEEKAPQVDVDKAVAELK
ARKRILEAKELALQPKDDIVDRAKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKN
NVVHAWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLK
AHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQEELADLFVNYNVKSPITGNDLSPPVSFN
LMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSG
LIRVREFTMAEIEHFVDPSEKHHPKFQNVADLHILLYSSKAQTSGQSAHSMRLGDAVEQG
VINNSVLGYFIGRIYLYLVKVGISPNKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIV
GCADRSCYDLSCHARATKVPLVAEKPLKEPKTANVVQFEANKGAIGKAYKKDAKLVLEYL
SICDECYINEMEKLLNEKGEFTFETEGKTFQLTKDMVGVKRFQKTLHVEEIVPNVIEPSF
GIGRIMYTIFEHTFRIREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFIPFVKELSEALT
RNGVSHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNRSPHTATLRDRDSMRQIRAEI
SELPTIVRDLANGNITWADVEAKYPLFEGQETGKKETIEE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccccttagcgtcctccgcgccgcctcgctcggccgcctcagaagcagcagc
agcatccgcagcctcctgctcagccccctcgcctccctcggcctccagcccagccccgcc
ggccggaccctggtcacccggcgccccgggtccccctccgccgtccctgccgcctcctcc
tcctcctcctcgccctcccagtggaccagcaaccccggcgccggcatggacgggcccgcc
gccgaggcgctgctcgccccgctcaggcaggcggtgcggcagcagggcgaacttgttcga
aagttgaaggaagagaaggctccccaggtggatgtagacaaagcagtagctgaactcaag
gctcgcaaaagaatccttgaagcaaaggagctggctttgcagccaaaggatgatatcgtg
gacagagctaaaatggaagatactctgaagcgaaggtttttctatgaccaggctttttct
atttatggaggtgtgagtggcctgtatgattttggtcctgtgggttgtgctttgaagaac
aacgtagttcatgcctggaggcagcatttcatccaagaagagcagattcttgagatagac
tgcaccatgctcacgccagaacctgttctgaagacctccggccacgtagacaaatttgca
gacttcatggtgaaggatgtgaaaaatggggagtgttttcgagctgatcatctcctgaaa
gctcacttacagaagctgatgtcggacaagaaatgtacagctgagaagaaggctgaaatg
gagaatgttctgacacagttggacaactacggccaggaagagcttgcggatctgtttgta
aactacaacgtgaagtctcccattactggaaatgacctcagtcctccggtgtccttcaat
cttatgttcaagacatctatcgggcctggaggaaacatgccaggttacctgagaccggaa
actgcgcaggggatcttcctgaactttaaacgcctcttggaatttaaccaaggcaaactt
ccttttgctgctgctcagattgggaactccttcaggaatgagatctctcctcgctcaggc
ctcattagagtcagagaattcacaatggcagaaattgagcattttgtggatcccagtgag
aagcatcaccctaagttccagaatgtagcagaccttcacatcctcttgtactcttccaaa
gcccagaccagtgggcagtcggctcattccatgcgtctgggggatgctgttgagcagggt
gtaatcaataactcggtgctcggttacttcattggccgcatctacctctaccttgtcaaa
gtcggcatctctccaaacaagctgcgcttccgacagcacatggagaacgaaatggcccac
tacgcctgcgactgctgggatgcagagtccaaaacatcctacggatggattgaaattgtt
ggctgtgctgaccgctcttgctacgacctctcttgccacgccagagccaccaaagttcct
cttgtagctgaaaagcctctgaaggaacccaaaacagccaacgtcgttcagttcgaagca
aataagggagccattggcaaggcttacaagaaggacgctaaactggtgctggaatacctt
tccatctgcgatgagtgctacatcaacgagatggagaaactgttgaacgaaaaaggggaa
tttacctttgaaacggaagggaaaacttttcaactaacaaaggacatggtcggtgtgaag
aggttccaaaaaaccttacatgtggaagagattgtccccaatgtgattgagccttcgttt
ggtatcggaagaatcatgtacacgatatttgagcacacgttccgcatccgggagggagat
gagcaacggacgtacttcagtttccctgctgtggtggcgccgttcaagtgctctgtcctt
cccctgagccaaaaccaggaattcattccgtttgtgaaggaactatccgaagccctcaca
agaaacggggtctcccacaaggtggacgactcctccggatccatcggccggcgctacgcc
aggacggatgagatcggtgtggcttttgggatcacgattgactttgacacggtcaaccgg
tcaccgcacacggccaccttgcgagaccgcgactccatgcgccagatacgagctgagatc
tctgagcttcccaccatagttcgggaccttgcaaacggcaacataacctgggctgatgtg
gaggccaagtatccactcttcgagggacaagagactggcaaaaaggagacaatagaggaa
tga
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