Podarcis raffonei (Aeolian wall lizard): 128398449
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Entry
128398449 CDS
T09310
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03271
Virion - Rotavirus
praf04145
Phagosome
praf04510
Focal adhesion
praf04512
ECM-receptor interaction
praf04514
Cell adhesion molecules
praf04530
Tight junction
praf04810
Regulation of actin cytoskeleton
praf04820
Cytoskeleton in muscle cells
praf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
128398449 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128398449 (ITGB1)
04514 Cell adhesion molecules
128398449 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128398449 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128398449 (ITGB1)
04530 Tight junction
128398449 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128398449 (ITGB1)
04810 Regulation of actin cytoskeleton
128398449 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128398449 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
praf04131
]
128398449 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128398449 (ITGB1)
04515 Cell adhesion molecules [BR:
praf04515
]
128398449 (ITGB1)
04090 CD molecules [BR:
praf04090
]
128398449 (ITGB1)
Membrane trafficking [BR:
praf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128398449 (ITGB1)
Exosome [BR:
praf04147
]
Exosomal proteins
Proteins found in most exosomes
128398449 (ITGB1)
Cell adhesion molecules [BR:
praf04515
]
Integrins
Integrin beta subunits
128398449 (ITGB1)
CD molecules [BR:
praf04090
]
Proteins
128398449 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128398449
NCBI-ProteinID:
XP_053215515
LinkDB
All DBs
Position
12:18804295..18836150
Genome browser
AA seq
806 aa
AA seq
DB search
MAQANFMFLIWIGLLSCFVVCGSAQQGGSNCIKANAKSCADCIQAGPNCGWCKNATFLQE
GESTSAQCDDLEVLKTKGCPPDEIENPRGSQAMPKNKEVTNRVKGAAENLKPEDITQIQP
QQVQLKLRIGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTSLMSKMKNI
TSDFRIGFGSFVEKTVMPYISTTPAKLKNPCTVDLNCTSPFSYRNVLNFTSDGNLFNQLV
GDQQISGNLDSPEGGFDAIMQVAVCGSKLGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGRCHLDNNMYTMSHYYDYPSIAHLVQKLSDNNIQIIFAVTQEFQPVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENNKLPKEVTIEYKSFCKNGVNGTGDEGRKCS
NISIGDEVSFEIKVTANQCPEKGQGETIKIKPLGFTEEVEINLEFICECECHKDGIPDSP
ICFFGNGTFECGACRCKPGRIGKLCECSMDEVNSEDMSGTCRPANSSEICSNNGECICGQ
CVCRKRENANEIYSGRFCECDNFNCDRSDGLICGGHGECKCRECECAENYTGSACDCYMD
TTPCVAGNGQICNGRGICKCGVCNCTDPKFTGPTCELCPTCPGVCAEHKDCVQCRAFNRG
GKKDTCEEECSHFSLIPVDHREKLPQPGQYKAQSHCKEKDIDDCWFYFTYSVDSNNNAIV
HVVKTPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTQENPIYKSPINNFKNPNYGRKAGL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcaaatttcatgtttctcatctggattggattattaagctgctttgtggtc
tgcggatctgcccaacaaggcgggagcaattgtataaaagctaatgctaaatcatgtgct
gattgtatacaagctggaccaaattgtggatggtgcaaaaatgcaaccttcttacaagaa
ggagaatctacttcagcacaatgtgatgatttggaagttttaaaaactaagggctgccct
ccagatgaaatagaaaatcccagaggctcacaagctatgccaaaaaacaaggaagtaacc
aatcgtgtcaaaggggctgctgagaatcttaaaccggaagacattactcagattcaacca
cagcaagtgcaattaaagctgcgaataggggaaccacagacattttcattaaaatttaag
agagctgaagattatcccattgatctttattaccttatggatctctcctactctatgaaa
gatgacttggagaatgtgaaaagccttggaacttctctcatgagtaaaatgaagaatata
acttcagattttcgaattggttttggctcttttgttgaaaaaactgtaatgccttatatt
agtactacgccagccaaactcaagaacccatgcaccgttgaccttaactgtacaagccct
tttagctacaggaatgtactcaactttaccagcgatggaaatctgttcaaccagcttgta
ggtgatcaacagatttctggcaatctggattctcctgaaggtggatttgatgcaataatg
caggttgctgtttgtggttcaaaacttggatggagaaatgtcactcggttgttggtattt
tctacggatgctggatttcattttgctggagatggaaaacttggaggaattgtcttgcca
aatgacgggcgatgtcatttagataacaatatgtacacaatgagccattattatgattat
ccctccattgcacaccttgttcagaagctaagtgacaataatattcagataatatttgct
gttacacaagaatttcaaccagtttacaaggagctcaagaatttgattccaaaatctgca
gtgggaacactctcttcaaactccagtaacgtgattcaactgataattgatgcctacaat
tcattgtcttcagaagtcattctggaaaacaacaaactaccaaaagaagtcacaattgaa
tataaatctttctgcaagaatggagtgaatggtacaggagatgaaggaagaaagtgctcc
aacatttcaattggagatgaggttagctttgagattaaagtaacagccaaccagtgtcca
gaaaaagggcagggtgaaaccattaaaatcaagccactaggtttcactgaagaggtagaa
attaatctggagttcatctgtgaatgtgaatgtcacaaggacggaattccagacagccct
atttgcttctttggaaatggaacatttgagtgtggtgcctgcaggtgtaaaccaggacgt
attggaaagctctgtgaatgcagcatggatgaagtaaacagtgaagatatgtcaggcacc
tgtagaccagcaaacagttcagaaatatgtagtaacaatggagaatgtatttgtggacag
tgtgtgtgcaggaagagagagaatgcaaatgagatctactctggccggttttgcgaatgt
gataacttcaactgtgatcgatctgatggcttgatttgtggaggacatggtgaatgtaaa
tgtcgtgagtgtgaatgtgcagaaaattatacaggctctgcttgtgattgttacatggat
accaccccatgcgtagctggaaatgggcaaatctgtaatggcagaggaatctgcaagtgt
ggagtctgtaactgcacagatcccaaatttacggggccaacatgtgaattgtgcccaacc
tgccctggagtttgtgcagagcacaaggactgtgtgcagtgcagagcttttaacagagga
ggaaagaaggacacctgtgaagaagagtgttcacattttagcttgataccagtagaccat
agagagaagttgccacagcctggacaatataaagcacagtctcattgcaaagagaaggat
attgatgactgctggttctatttcacctactcagttgattcaaacaacaatgccattgtc
cacgtggtaaagaccccagaatgcccgacaggtcccgatatcattcccatcgttgctggt
gtggtggctggaattgttcttattggtcttgctttattgctgatttggaagctacttatg
atcattcatgacaggagagaatttgcaaaatttgagaaggaaaagatgaatgcaaagtgg
gatacgcaagaaaatcctatatacaagagtcctattaataatttcaagaatccaaactat
ggacgtaaagctggtctctaa
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integrated database retrieval system
