Podarcis raffonei (Aeolian wall lizard): 128399029
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Entry
128399029 CDS
T09310
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128399029 (PMS1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128399029 (PMS1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128399029
NCBI-ProteinID:
XP_053216265
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All DBs
Position
1:120163347..120217676
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AA seq
915 aa
AA seq
DB search
MKQLAAETIRLVSSSQVITSVVSVVKELLENSLDANATNVDVKLENYGFDKIEIRDNGDG
IKAADVPVAAVKHYTSKISSSEDLENLATYGFRGEALGSICSMSEVLITTKTASDDFSTQ
YLLDRSGHVTSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTDKKRKEEIKKIQKLLMAYG
IIKPELRITFTHNKTVMWQKTRVSDHKMAFMAVVGTAVMSGMVPFQHHSEDPEVFLSGFL
PKPSSDGCLTSHSSAERSFIFVNNRPVHQKEILKLVQQYYNLKSNKDSNRSHPVFFINIA
VPPSALDVNLTPDKSQVFLHNKESVCLAVENVLTSLYGPLPGTASCETDSSGAASGDIFV
NEAEQMNVSVNEAEPRNINSHACAHLISLSNAQNSETEKPTEVCLENQMLYNNSAVGFST
KNELSGCGTAASDRFLREHQQNKSEVIFNLDGNPLMDTNSKNGLDGDLRNDHFQEAIERT
TTLKASSEVTGDKWSLGNAFKNTRGENIEPVRILVPEMECARPQGKRNDDGQQTFQEGSS
IQSLKKTNVVNDKLGQITAYDIIKNRIIKKAMSAFDFFTQDHRPRLLAENTKVSMEELML
KLEEMWETLNEEEKKKYEEKAERDLERYNKQSRKAADQSIQRSTRERERKHKSKLKDCLI
NQQKLDKLFHSQMEEKPNSCKAIKIVQVPFSVDSFRHKLHVLKQKEAVKDDPCLIRLPNF
PDAWIIASEKKIMMLNPYRVEEALLFKKLLENHKLPIKKLDNPIMLTDGLFSDSRYKEVL
CNMPKESIRFDGSSYLSDTRLTANGFKIKIIPAMGNRLEIEGMANCLPYYGIPDLKEILS
AVVDCNAKEVHECRPLKVMNYLEGEAVRLCRQLPLYISKEDVQDTIHKMETQLGNQHKGC
VHGRPFLHYLTNIPE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttggcagcagaaactatccggctggtttcgagttcgcaggtgataacgtct
gttgtcagtgtggttaaagaactattagagaattctttggatgctaacgcaacaaatgtt
gatgttaaattggaaaactatggttttgataagattgaaattcgagataacggtgatggg
atcaaggcagcggatgttcctgttgcggcagtgaaacactacacttcaaaaataagctca
tctgaggaccttgaaaacttggcaacatacggtttccgtggtgaagctttgggttcaatt
tgtagcatgtctgaggtcctgattacaaccaagaccgcttctgacgatttcagcacccag
tacctgctggatagaagcggtcacgtcacttctcaaaagccgtctcatctcggacaaggt
acaactgtaactgttctgaagctgttcaagaatctccctgtgagaaagcagttttactca
acagataaaaaacgtaaggaagaaattaaaaaaatccagaaacttctgatggcctacggc
atcataaaaccagaactgaggatcacatttacacacaacaagacagttatgtggcagaag
accagggtgtccgatcacaaaatggctttcatggcagtagtgggaactgccgttatgagc
ggcatggtaccttttcaacaccatagtgaagatcctgaggtgtttctcagcggctttctt
ccaaagcccagttcagatggttgtttgacaagtcattcaagtgcagaaaggagcttcatc
tttgtaaacaatcgaccagtgcaccagaaggaaattctaaagctggttcaacaatactat
aacctgaagtcaaacaaggattctaatcgttcacaccctgttttctttatcaacattgct
gttcctccatctgctttggatgtcaatttaacaccagataaatctcaagtgtttctgcat
aataaggagtctgtctgtcttgctgttgaaaatgtcttgacctcactctatggacctcta
cctgggactgcttcttgtgaaactgattcgtcaggtgctgcttcaggagacatctttgtt
aatgaagcagaacaaatgaatgtgtctgtaaatgaagctgaacccaggaacatcaattca
catgcatgcgctcatttgatttcattgagtaatgcacaaaatagtgaaacggaaaaaccc
acagaggtttgtttggagaatcaaatgttgtataataattcagctgtaggattttctacc
aaaaatgaactatctggctgtgggacagctgcgtctgatagatttttgcgtgagcaccaa
cagaataagtctgaggtgatatttaacctagatggcaatcccttaatggacacaaattct
aaaaatggccttgatggtgatttgagaaatgaccatttccaggaagcaatagagagaacc
acaaccctgaaagcttcttctgaagtaactggtgacaaatggagtttggggaatgcattt
aagaataccagaggagagaacattgaacctgttcggattttggtccctgaaatggaatgt
gcaaggcctcaagggaaaagaaatgatgatggccaacaaacatttcaagagggaagtagc
attcaaagtctgaaaaaaacaaacgtggtaaatgataaactgggacagattacagcctat
gacataataaaaaatcggataataaagaaagccatgtcggcatttgacttttttactcaa
gaccatcgcccacgattgttagctgaaaataccaaagtgagcatggaagaactaatgctg
aaattggaagaaatgtgggaaacactgaatgaagaagagaaaaagaaatatgaagaaaag
gctgaaagagacttggagcgatacaacaagcagagcagaaaagctgcagatcagagtata
caaagatcaacaagggagagagagagaaaacataagtccaaacttaaagactgtctaatt
aatcagcagaaacttgataaactttttcattctcaaatggaggagaaaccaaatagttgc
aaagccataaaaattgttcaagtgcccttctctgtggattcattcagacataaacttcat
gtgcttaaacagaaagaggctgttaaggatgatccttgcctaattcgtcttccgaatttt
cctgatgcgtggataattgcctctgagaaaaagataatgatgttgaatccgtacagagtg
gaagaagcccttctgtttaaaaaactgcttgaaaaccataaacttcctataaagaaactg
gacaacccgattatgttaactgatggtctttttagtgattcgcgttataaagaagttctt
tgcaatatgcccaaggaaagcataagatttgatgggtcatcctacttgtcggatacaaga
cttacagcaaacggatttaagataaagataataccagctatgggaaatcggctggaaata
gaaggaatggcaaactgcctgccgtactatgggatacctgatctgaaagaaattctgagt
gctgtggtagattgtaatgcaaaagaagttcatgagtgtcgacctcttaaagtcatgaac
tacctggagggagaagcagtaagactgtgtcggcagctacctttgtatatatccaaggaa
gatgtacaagacaccatccacaaaatggagacacaacttggaaatcaacataaaggctgt
gttcatggtcgtccatttcttcattatttaacaaatattccagagtaa
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