Podarcis raffonei (Aeolian wall lizard): 128399300
Help
Entry
128399300 CDS
T09310
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128399300 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
praf03036
]
128399300 (CHD8)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128399300 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
128399300
NCBI-ProteinID:
XP_053216567
LinkDB
All DBs
Position
13:complement(45484879..45550769)
Genome browser
AA seq
2487 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDESFSQGAPDPIEEALGLPGGALDSLAGGAKEQPAPAQL
EPPQPQALPLSDAQPEAVPELPQQDQPGLLQAPQDQEVLSQGNPFMGVSSATTTTVAVPS
SSAGGQQGATVTAAPPAAPKIVILKAPAGSSVTGAHVAQIQAQPIGAANGGKVTFAKVLT
GTPLRPGVSIVSGNAVLATKVSPGAGAPATLHRLVQPGRPVKQLVLQPIKSQPGGSTGAT
PLKPAVTLTSTPAQGESKRITLVLQQPPAGGGAPGQRHVVLGSLPGKIVLQGNQLAALSQ
AKGAPGQPAKVVTIQLQVQQPGQQQLGGQPGTQKIQLLQQPPPTSSGQQGTLGVSSVQQA
QVVSGSGQRVTVPLKVVLQPQASSSQGSSSGLSVVKVLSSSEVAALPSSSGTARSSSDES
RKLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPSVRPEETGERKRRRKGGGD
RVPKEERPRKGRGQGGSGKSKGRGKPSTITPVVGKKRKRNASSDNSDAEVMPAQSPREEE
ESSVQKRRSNRQVKRKKYTEDLDIKITDDEDDEELDVTGPVKAEQPPAPEPPAPEPIPEG
ETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPTGQFTEAEEFFVKYKNYSYLHCEWA
TIAQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNPDYVEVDRILDESHSIDKDNGEP
VIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSRHPELKRVARPQAGSWKKLELSH
EYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIRGPFL
VIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDAL
ITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KQETIIEVELTNIQKKYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLING
AEEKILTEFRDSCHHHLPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCL
DILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD
TCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL
QSMSGREGSIAGIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTIT
IESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDLDMLNSKNNLVIDTPRVR
KQTRHFSTLKDDDLVEFSDLESDDDDRPRSRRHDRHHHPLHHSYGRTDCFQVEKQLLVYG
WGRWREILSHGRFKRRMSERDVETICRAILVYCLMHYRGDENIKGFIWDLISPVENGKAK
ELQNHSESHAPALSSLPVPRAGLSIPVPRGRKGKKVKSQTTFDVQKAEWIRKYNPDTLFQ
DEGYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGTISSEIDMWFPLVDQAEVPT
AWWDAEADKSLLLGVFKHGYEKYNTMRADPALCFLEKAGRPDEKAIAAEHRLDVGEGVDF
DKDCEDPEYKPVGGPAKEPDDEGDPLMMMDEEISVVDGEEGQPGNLFWPPASAITARLRR
LITAFQRSYKREQLKMEAAERGDRRRRRCEAAFKLKEMVRREKQQRWTRREQSDFYRVVS
TFGVEYDPDTMRFHWGRFRAMARLEKKTDESLAKYFHGFVAMCRQVCRLPPAASDESPDP
TLFIEPITEERASRTLYRIDLLRRLREQVLCHPLLEERLALCQPPGPEMPPWWQCGRHDG
ELLRGVARHGLSQTDATIMQDPDFSFLAARLNHMHSRAGSTGTLLPPPPPPPPPQPLGLP
LSGAAVVTAAAPPAPLLLPPPLHELPTPRQQPTALPIKVESVDDSDSELDLSKISASSSC
SSTSGCSDDSDGEEASCGAKLFEEEESSLLSLPTSHEGNSPQPSASDLLLQERQRAHEWP
KDRVLINRIDLVCQAVLSGKWPTAQQGQVGSCLMQGEGLPRLHGEYTSSPIPHICPLASQ
EEGAASFTRLRHSGQEKEFTVQIKDEEGIKLTFQKHKLVPNGTMRDRPALTQKKSSKKMV
ELELQCLEALRGPDIDLEARIPVVNKTDGTLLVGDAAPRRADLEVWLQAHPEYAVDPRFL
AYMEERRKHRWPRFPKPVPIEPACLMGLERMQAASISANGKKSFLPDPTMNRLLPGSVGA
ESAQKRGRQTPMEFSNMMALMGAGRVQLGAAGPLSLHHAHFQASTAHGSPLQYMPFSTAA
AAASASAASSSAAAALLHPGLGHPGYATGALHLGHPQAVDEDDEEDEMDDLSQGYASSER
DFSLLDDDPMMPANSDSSEEGDEEGDD
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccataatggacctcttcgatgaccccaacctttttggcctggactcattg
acggatgagagcttcagccagggggccccagaccccattgaggaggccctggggctgcca
ggcggtgccttggactccctggcagggggcgccaaagagcagccagcccctgcacagctg
gagcctccccagccacaggccctgcccctctcagacgcgcagcccgaggctgtgcctgaa
ctgccgcagcaggatcagccggggctcctgcaggcccctcaggaccaggaagtcctcagc
cagggcaaccccttcatgggcgtctcctctgccaccaccacgacagttgcagtgccgtct
tcatctgccggagggcagcaaggcgccactgtcacggcggccccacctgccgccccgaag
attgtcatcttgaaggcgccggcaggtagttcagtgacgggggcgcacgtggcccagatc
caagcccagcccatcggggccgccaacgggggcaaagtgacattcgccaaggtgctgaca
ggcaccccactgcggccgggggtctccatcgtctcgggcaatgcggtgctggccaccaaa
gtgtcccctggagcgggggccccagccacactccaccgcctggtgcagcctggccggccc
gtcaagcagctggtgctccagcccatcaagagccagccagggggcagcactggagccacg
cccctcaagcctgccgtcactctgacctctactccagcgcagggagagtcgaaacgcatc
accttggtcctccagcagcccccggcgggtggaggcgccccagggcagcgccacgtggtt
ctgggcagcctgccgggcaagattgtactccagggcaaccagttggcggccctgagccag
gccaagggcgcgccagggcagccagccaaggtggtcaccatccagctccaagttcagcag
cccggacagcagcaacttggcggccagcctgggacccagaagatccagcttctgcagcag
cccccacccacctcctccggccagcaagggacgttgggtgtgtcctccgtacagcaagcc
caggtggtgagcggttcggggcagagagtgacagttcccctcaaagtcgtgttgcagcca
caggccagctcatcgcaaggcagctcctctgggctctccgttgtgaaggtgctgagcagt
agcgaggtggccgccctcccctcctccagtgggacggcgcggagcagctcggacgaatcc
cgcaaactggagcaccagaagaagcaggagaaggccaaccggattgtggcggaggccatc
gcccgggctcgggcccggggcgagcagaacatcccccgcgtgctgaacgaggatgagctt
cccagcgtgcgccccgaggagacgggagagcgcaagcgtcgccggaaaggcggaggcgac
cgcgtccccaaggaagagcggccgcgcaagggcaggggccaggggggatcggggaagagc
aaaggaagagggaagcccagcaccatcacgccagtcgtagggaagaagcggaaacggaac
gcttcctcggacaactcggacgctgaggtcatgccggcgcagtccccccgcgaggaggag
gagagcagcgtgcagaagcggcgctcgaaccgtcaggtgaagcggaagaaatacaccgag
gacctggacatcaagatcacggatgacgaggacgacgaggagctggatgtgacggggccc
gtcaaggccgagcagccgccagcccccgaaccacctgctccggagccgattcccgagggg
gagacgctgccttccatgcagttttttgtggaaaaccccagtgaggaagatgctgctata
gtggacaaagttctatccatgcgggtagtgaagaaggagcttcctaccggacagtttaca
gaagcggaagaattcttcgtgaaatacaagaactactcctacttgcattgcgaatgggcc
accatcgctcagctggagaaagacaagcggatccaccagaagctcaagcgctttaagacc
aaaatggcccagatgagacacttctttcacgaggacgaggagcccttcaatccagactac
gtggaggttgaccgcatcctggacgagtcgcacagcattgacaaggacaatggggagccg
gtgatctattacttggtgaagtggtgttcgctcccctatgaggacagtacatgggaactc
aaagaggacgtggatgaggggaaggtccgggagttcaaacgcatccagtctaggcacccg
gagctgaagcgcgtggcccgtccccaggctggttcctggaagaaattagagctgtctcat
gaatacaagaacggcaaccaactgcgggagtatcagctggagggtgtgaattggctgctg
ttcaactggtacaacaggcaaaactgcatcctggccgacgaaatgggcctgggcaaaacc
atccagtcgattgccttcctgcaggaggtttacaacgtgggcatccgggggcccttcctg
gtcatcgcccctctctccaccatcaccaactgggagcgggagttcaacacctggaccgag
atgaacaccatcgtctaccacggcagccttgcctctcgccagatgatccagcaatacgag
atgtactgcaaagattcccggggccgcctgattccaggcgcatacaagtttgatgccctg
atcactacttttgagatgatcctgtcggactgccccgagctgagggaaatagagtggcgt
tgcgtcatcattgacgaagcccatcgccttaagaaccgcaactgtaaactgctggacagt
cttaagcacatggacctggagcacaaagtgttactgactggcacccccctccagaacaca
gtggaggaactcttcagcctcctgcatttcctcgagccctcccagttcccctcagaatca
gagttcctcaaggactttggtgacctcaaaactgaggagcaggtgcagaaactgcaggcc
atcctgaagcccatgatgcttcggcggctgaaggaggatgtggagaagaacttggccccc
aagcaggaaaccatcatcgaggtggagcttaccaacatccagaagaagtactaccgggcc
atcctggagaagaacttcaacttcctgtccaaaggggcagggcacagcaacatgcccaac
ctcctcaacaccatgatggagctacgcaagtgttgcaaccatccctacctcatcaacggt
gccgaggagaagatcctgaccgagtttcgggattcctgccaccaccacctgccccatgat
tttcccttgcaggccatggtgcgctcctctgggaaactggtgctgattgataagctgctc
cccaagttgaaggccggcgggcacaaggtgctgatcttctcccaaatggtccgttgcctt
gacatcctggaggactacctcatccagaagaggtatctctacgagcgcattgacgggcga
gtgcgggggaacttgcggcaggcggccatcgatcgcttcagcaagcctgactcggaccgc
ttcgtcttcctgctctgcacgcgggcgggagggctgggcatcaacctgacggctgccgac
acttgcatcatctttgattcggattggaacccccagaacgacctgcaggcccaggcacgc
tgccatcgtatcgggcagagcaaggcagtgaaggtctaccgcctcatcacccgcaactcc
tacgagcgagagatgtttgacaaagccagcctcaagctggggctggacaaggccgtcctg
cagtccatgagcgggagagagggcagcattgccgggatccagcagttttcaaagaaggag
atcgaagacctgctgcggaagggagcctatgctgccatcatggaagaggacgacgagggc
tccaagttctgtgaagaggacattgaccagattctgctgcggcggacaaccactatcacc
attgagagcgaagggaagggctccaccttcgccaaggcgagctttgtggcctcagaaaat
aggacggacatcgccttggacgaccccaacttctggcagaagtgggccaagaaggcagac
ttggacctggatatgctcaacagcaagaacaacctggtgattgacaccccccgtgtgcgc
aagcagacgcgccacttcagcaccctgaaggacgacgacctggtggagttctccgacctg
gagagcgacgacgatgaccggccgcgctcgcgacgccatgaccgccaccaccacccgctc
caccactcctacgggcgcacggactgcttccaggtggagaaacaactgctagtctatggc
tggggccgctggcgggaaatcctgtcgcatggacggttcaagagacgcatgtctgaacgg
gatgtggagaccatctgccgggccatcctcgtctactgcctgatgcactaccggggcgat
gagaacatcaaggggttcatctgggatctcatcagcccggttgagaacggcaaagccaag
gaacttcagaaccactccgagagccatgcccctgctctgagctcacttcctgttcctcgg
gcaggcctgtccatcccagtcccacgaggccgcaaagggaagaaggtcaagtcccagact
actttcgacgtccagaaagccgagtggatccgcaagtacaaccccgacaccctcttccag
gatgagggatacaagaagcacctcaagcaccaatgcaacaaagttctcctacgtgtccgt
atgctgtattacctgcgccaggaggtgattggggaccaagccgagaaagttttggcaggc
actatttccagtgaaatcgacatgtggttcccactggtggaccaagcagaggtccccaca
gcctggtgggatgcagaagctgacaagtctttgctccttggggtcttcaaacatggctac
gagaagtacaacaccatgcgagcagatcctgcgctctgcttcctggagaaggctggtcgc
cctgacgaaaaggccatcgccgccgagcatcgcctggatgtgggagagggggttgatttc
gacaaggactgcgaggacccggagtacaaaccagtgggaggccccgccaaggagccggat
gatgagggtgacccactgatgatgatggatgaggaaatctctgtggtggacggtgaagaa
ggtcagccggggaacctgttctggcccccagcctcggccatcacggctcgcttgcgaagg
ctgatcaccgccttccagcggagctacaaacgcgagcagctcaagatggaggcggcggaa
cgaggggaccggcggcggcggcgctgtgaggccgcattcaagctgaaggagatggtgcgg
cgagagaagcaacagaggtggacacggcgagagcaatctgacttctaccgcgtcgtctcc
acgttcggggtggagtacgacccagacaccatgcgcttccactggggccgcttccgggcc
atggcccggctggagaagaagacggacgagagcctcgccaagtatttccacggctttgtg
gccatgtgccggcaagtgtgccggctgcctcccgcagcaagcgatgagtctccagacccg
acactgttcattgagcccatcacggaggagagggcctcgcgcaccctgtaccgcattgac
ctcctgcggcgcctgcgggagcaagtcctgtgccacccgctcttggaagagcgcctcgcc
ctctgccagcccccgggccccgagatgcctccctggtggcaatgcgggcgccacgacgga
gagctgctgcgtggcgtggcccgccacggcctcagccagaccgacgccaccatcatgcag
gacccggacttctccttcttggccgctcgactcaaccacatgcacagtcgggcggggagc
acagggacgctgctgccgccacccccgccgcctcccccgccacagcctttggggctgcct
ctttccggggctgccgtggtgacagcggccgctcctcctgcccccctgctcttgccgccg
cccttgcatgagctccccactccgcgacagcagcccacagccctccccattaaagttgaa
tcggtggacgactcggactcggagctggacctcagcaagatctccgcttcttcgtcttgc
tcttctacttcggggtgctcagatgatagtgacggcgaagaggcctcttgcggtgcgaag
ctgtttgaggaggaagagtcgtcgcttctctctctgcccacctcccacgagggcaactcc
ccacagcccagcgcctctgacctgctgttgcaggagcgccagcgggcccacgagtggcca
aaggaccgagtgctcatcaatcgcatcgacttggtatgtcaagccgtgctctctgggaaa
tggccgacagcgcagcagggccaggtgggatcctgcctcatgcagggagaaggcctcccc
cgcctgcacggggagtacaccagctctcccatcccccacatctgccccctggcatcgcaa
gaagaaggggccgcctccttcacccgcctccggcacagtgggcaagagaaggagtttacc
gtgcagatcaaagatgaagagggaatcaagctgaccttccagaagcacaagctggtcccc
aacggcactatgcgcgaccgccccgctctcactcaaaagaagagcagcaaaaagatggtg
gagctggagctgcagtgtctggaggcgctgagaggccccgatatcgacctcgaggcccgt
atcccagtggtgaataagactgacgggacacttttggtgggtgacgcagccccccggcga
gctgaccttgaggtgtggctgcaggcccacccagagtacgctgtcgaccctcgcttcttg
gcgtacatggaggagcggcggaagcacaggtggcctcgctttcccaagcctgttccgata
gagccagcctgcctgatgggtctggagcggatgcaggcagccagcatctccgctaacggc
aagaagagcttcctgcccgatcccaccatgaaccgcctccttcccggatcagttggggcc
gagagtgcccagaagcggggccgccagacccccatggagttttctaatatgatggctctg
atgggtgccgggcgggtccagctgggcgccgcggggcccctctccttgcaccacgcccac
ttccaggccagcacggcccacggctctcccttacagtacatgcccttttcgactgccgcc
gctgccgcctccgcctccgccgcctcgtcctccgctgccgcagccctgctccaccccggc
ctgggccaccctggctacgccacgggtgccttgcacctgggccacccacaggccgtggac
gaggacgacgaggaagacgagatggacgacttgtctcagggctacgccagctcggagcgg
gacttctccttgctcgacgacgaccccatgatgccggccaactccgactccagcgaggag
ggcgacgaggagggcgacgactga
DBGET
integrated database retrieval system
