Podarcis raffonei (Aeolian wall lizard): 128399385
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Entry
128399385 CDS
T09310
Name
(RefSeq) cleavage stimulation factor subunit 2-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128399385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128399385
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128399385
U7-dependent histone pre-mRNA processing factors
128399385
BRITE hierarchy
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GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
128399385
NCBI-ProteinID:
XP_053216744
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All DBs
Position
13:complement(35328665..35340717)
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AA seq
658 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGEPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARSMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTTVPALIPSGLQAGPGQGPGPGQGPGPGPGPGPGPGPGPGPNAQMN
QPNVPSSQPQPIQGGMHVNGAPPMMQPPMQGGVPAPGQMPSSGPGPLAPGGGMPGGGPML
LERGQGNLQLSPVGPARPSSIERVQVPMPDPRAPMQRGPMPASGPPPRGLLGDAPNDPRG
GTLLSVTGEVEPRGYLGPSHQGPPHQGPPMHHMAGHDNRGPPPHEMRGGPMGEPRPLMGE
PRGPMMDTRGGRDPRGMEPRGMDGRGMEPRGMEPRGMEPRVMDARGMEPRGMEPRGMEPR
VMEMRGMEPRGMESRGMEPRGMEPRGMEPPRGMEPRGMEPPRGMEPPRGMEPPRGMEPRG
MDSRGPGPNPRGPMTGGIQGPGPLSMASTVSQGPRQVPNMPAAAMQAGGMPGPSVPAAGQ
PGGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTSAP
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctctccgtgcgggatcccgccgtggaccggtccctgcgctccgttttcgtg
gggaacatcccatatgaagccacagaagagcagttaaaggacattttctcagaggttggg
cctgtcgtcagtttccgattggtgtatgaccgagagacgggcaaaccaaaaggttatggc
ttttgtgaatatcaagaccaggagacggcactcagtgccatgcggaatctgaatggacgt
gagttcagtgggagagccctgcgtgtggacaatgcagccagtgagaagaacaaagaagag
ctgaagagcctgggcactggggcccccatcattgagtcaccctatggagagcctgtgaac
cctgaagatgctcccgagtccatcagcagggctgttgccagcctcccaccagagcagatg
tttgaactgatgaagcagatgaagctctgtgtccagaacagtcctcaggaggctcggagc
atgctgctgcagaaccctcagctcgcctatgccctgctgcaggcccaggtggtgatgcgg
attgtggatccggagatcgctctgaaaatcttgcatcggcagacgaccgtcccagctctg
attccaagcggcctgcaagcgggtccaggacaagggcctgggcctgggcaaggtcccggg
cctgggcctggacccggaccagggcctgggcctggtcctggtccaaatgcacagatgaac
cagccaaacgtcccctcctcccagccacaaccaatacaggggggcatgcatgtcaatgga
gccccccctatgatgcagccacccatgcagggaggagtgccagccccagggcaaatgcca
agctctggccccggccccttggctcctggaggtggcatgccaggaggtggcccgatgctc
ttggaacgtggtcaagggaacctgcagctctctcccgtgggacctgccaggccttcctct
attgagcgagtacaagtgcctatgccggatccacgggcccccatgcagcgtgggccaatg
ccagctagtggtccaccaccccgaggccttctgggagacgccccaaatgatccacgtggg
ggaactctgctgtcagtcactggagaagtggaacccaggggttaccttgggccatcgcac
caggggcctcctcaccagggcccccccatgcaccacatggctggccatgacaatcgtggg
ccgccgccccacgaaatgagaggtgggccaatgggagaaccaaggcctttgatgggagag
ccacgaggccccatgatggacacccgaggtggaagagatccaaggggaatggagccccga
ggcatggatggcaggggcatggagcccagaggaatggagcccaggggaatggagcccaga
gtgatggatgccaggggcatggaaccccgagggatggagcccagaggaatggagcccaga
gtgatggaaatgcggggcatggagcccagaggaatggaatctcggggcatggagcctcgt
gggatggagcccagaggcatggaaccacctcggggcatggagcccagggggatggagccc
cccagaggcatggagccacccagggggatggagccccccagggggatggaacccagaggc
atggactctaggggccctggccccaatccaaggggtccaatgactggaggcattcaaggc
cctggacctcttagcatggcatccactgtctcgcaggggcctcgacaggtgcctaacatg
cctgccgcagcaatgcaggctggaggcatgccaggaccaagcgtaccagcagctggccag
cctggagggttcagtcctggccaaaaccaggtaacaccccaggatcatgaaaaggccgca
ctcatcatgcaggtcctccagctgacggcagaccagatagctatgttgcctccagagcaa
aggcagagcatcctgatcctgaaagagcagatacagaagtccaccagtgccccttga
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