Podarcis raffonei (Aeolian wall lizard): 128399498
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Entry
128399498 CDS
T09310
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128399498 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128399498 (SPOP)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128399498 (SPOP)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128399498
NCBI-ProteinID:
XP_053217001
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Position
13:20914982..20965495
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNSMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtaccgagtcctcctcctccggcagagatgtcaagtgggcctgttgctgag
agctggtgttacactcaaatcaaagtggtcaaattttcctacatgtggaccatcaacaac
ttcagcttttgccgggaggaaatgggagaggtcatcaaaagttcaacattttcatcagga
gctaatgataaattgaagtggtgtttgcgcgtcaatccaaagggcttggacgaagagagt
aaagattacctttcgctctacctgctactggtcagctgtccaaagagcgaagtccgagcc
aaattcaagttctccatcctgaacgcaaaaggagaagaaacgaaagcgatggagagtcag
cgagcctaccggtttgtgcaaggcaaagactggggattcaagaagtttattagaagagat
tttctcttggatgaggccaacggactcctcccagatgacaagctcactctcttctgtgag
gtgagtgtagtacaggactctgtcaatatctccggccagaactccatgaacatggtgaag
gtacctgaatgccgcttggctgatgagttgggaggcctctgggaaaactctcgcttcaca
gactgctgcctgtgtgtggcaggccaggagttccaggctcacaaagccatattagcagca
cgttctccggttttcagcgctatgtttgaacacgagatggaagagagtaaaaagaatcga
gttgaaatcaatgatgtggaacctgaagtttttaaagaaatgatgtgcttcatttacacg
gggaaggcacctaacctcgacaaaatggccgatgatttgcttgcagctgctgataagtat
gctttggaacgcttgaaggtgatgtgcgaggatgctctgtgcagcaacctgtctgtagaa
aatgcagcggagatcctcatcttggctgatctacacagtgctgaccagctaaaaactcag
gcggttgacttcatcaactaccatgcttccgacgtcatggagacttcaggatggaagtcg
atggtcgtgtctcacccccatttggtggccgaggcgtatcgctcgttggcctctgcgcag
tgcccttttctgggacccccacgcaagcggctgaagcaatcctaa
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