Podarcis raffonei (Aeolian wall lizard): 128399539
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Entry
128399539 CDS
T09310
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128399539 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128399539 (CNOT3)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128399539 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128399539 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
128399539
NCBI-ProteinID:
XP_053217075
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All DBs
Position
13:complement(38219635..38242579)
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AA seq
717 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSINVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEMFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKSLHNHHHQPPPTIPTSYPMGGSSSTSSSLGDGPGSNSNGAVAGSGNASGKANPP
AGHAPTTPTPYAQAVAPPPTSTNASQPRPPSTQQNASKQNGATSYSSVVADSSSDSTLSS
GNQALPNQTASHNPPSASVKEPSAASQPPSGGNTTGSSLLVPLTANPPASPTPSFSDSKP
AQTLLNGPPQFSSAAEIKAPEPLSTLKSMAERAAIGSSIEDPVPSLHLAERADILITSTT
SQPASNQPPIQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQ
YLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSW
RFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagaggaagctacaaggtgagattgatcggtgtttgaaaaaggtgtcggaa
ggcgtggagcagtttgaagatatctggcagaagctccacaatgcagctaatgccaaccag
aaggagaaatatgaagccgatctgaaaaaagaaataaaaaaactccagagattgagggac
cagatcaagacgtgggttgcatccaatgagattaaggacaaaaggcagctaatagacaac
cgaaaactcattgagacgcaaatggagcggttcaaggtagtggaacgtgagaccaagacg
aaagcctactcgaaggagggcctgggcctggcacagaaggtggacccagcccagaaagaa
aaggaggaggtcgggcagtggctgacgaacacaatagacaccttgaacatgcaggtggat
cagtttgagagtgaagtggagtcgctgtctgtccagacgcgcaagaagaaaggagacaag
gataagcaagaccggatcgagggcctgaagcggcacattgagaaacaccggtaccacatt
cggatgctggagaccatcctgcggatgctggacaatgactccatcaacgtggactccatc
cgcaagatcaaggatgacgtggaatactatgtggattcctcgcaggaccctgattttgag
gagaacgagttcctctatgatgacctcgacttagaagacattccacaggccctggttgcc
acttccccacccagccacagtcacatggaggatgagatgttcaaccagtcaagcagcacg
cctacctccaccacgtccagctccccaatccctcccagccctgcgaactgcacaacagag
aactctgaagatgacaagaaacggggacgatcaacagacagtgaagtgagccaatcccca
gcgaagaatggttcgaaaagcctccacaaccaccaccaccagccgcctcccacaatcccc
accagctacccgatgggcggcagctccagcacttcgtcctcgctgggggacgggcctggt
tccaacagcaacggggctgtggctggcagtgggaacgcgagcggcaaagctaaccctccg
gcagggcacgcacccaccaccccgaccccttacgcccaggctgtggcgcccccgcccacc
agcaccaatgcctctcagccccggcctcccagcacccagcagaacgccagcaagcagaac
ggggcaaccagttatagttctgtggtagcggacagcagttcagactccacgctaagcagc
ggcaaccaggcattgcctaatcagacggcgtcgcacaacccgcccagtgcttctgtcaaa
gagcccagcgcagcttcgcagccaccaagcggtggcaacaccactggatccagcctcctg
gtgcctctgactgccaaccctcctgcctcgcccacgcccagcttctctgacagcaagcct
gcccagaccctgctcaacgggccaccccagttcagctccgcagcagagatcaaggcacct
gagcctctaagtacattgaagtcaatggctgagagggcagctatcggctctagcatagag
gaccccgtgccatctctacatctcgctgaaagggctgatatcttaattacgagcacgacc
tcccagccagcctccaaccagccccccatccagctatctgaggtgaacatccccctttcg
ctcggggtgtgccccctggggcctgtgcctctcaccaaggagcagctctaccaacaggcc
atggaggaggccgcctggcaccacatgcctcatccttctgattcagaaaggatccggcaa
tatctgccgcgaaacccctgcccgacccctccgtaccaccaccagatgcctcccccacac
tccgatacggtggagttctaccagcgcctctctacagagacccttttcttcatcttctac
tatttggagggcacgaaggcacaatacctggcagcgaaggcgctgaagaagcagtcctgg
cgcttccacacaaagtacatgatgtggttccagcggcacgaagaacccaagaccatcact
gatgaatttgagcagggcacttacatctactttgactacgagaaatggggccagcgcaaa
aaggagggtttcacctttgaataccgctacctggaagaccgggacctgcagtga
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