Podarcis raffonei (Aeolian wall lizard): 128399580
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Entry
128399580 CDS
T09310
Symbol
GIGYF1
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128399580 (GIGYF1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128399580 (GIGYF1)
Surveillance factors
Other surveillance factors
128399580 (GIGYF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
128399580
NCBI-ProteinID:
XP_053217154
LinkDB
All DBs
Position
13:complement(53992452..54023591)
Genome browser
AA seq
1112 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLAEYRYGREEMLALYVKDNKVPEEI
QDKEFSAILQDDPLQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGAGAPPAGVSRGRGS
TRSRGRGRGESGFYQRSIEEAEGAFGRGGVREIHRSQSWDDRGERRFEKPIRREGAYPPP
SPSLFEARAPFEEVVPPGRKEFARSDSDNWRTLREEHEEEEEGSSGAVAVAGGSWRQSGG
PRRESERWRSASPDGGGPRSAGWREHGGEGRRRKFDFDFREREDEPRSGRRHRHNSDSFE
DDKDGLPEWCLEDEEEEMGTFDSSGAFMSLKKSPKETILEEQELSFQPLQEEEEEEELPE
AKDGDRREGGEVPASPTAKEGPERERKEPRQVPEEKLPAPPGAPWRTGPSFPTATAPVGE
CESVAPGVSSKVEASGLAPGGNKEKEALDGDPCLLSHPAQLNPAAVAALPTPASSSATAA
AATTEFTVGDNEDEDGMNHLQQEAEKMVASLQDSSLEEEHFTQTIVDHRNTAAALPLSHE
AAMKWFYKDPQGEIQGPFTTQEMAEWFQAGYFTMSLLVKRGCDEGFQPLGEVIKMWGRVP
FAPGPSPPPLLGNMDQERLKKQQELATAALYQQLQHQQLLQLVNSRQYAQCSLQQKVAAG
DLTQQQLTAFLQQLQALKPRAGEQGMIPSMNRSISVPDTGSLWDTHTSASPQAGGEASLW
DISINSSTQGPILEQLQLQHKLQERRGAELRAKRDEDERKRRQEEQKRREEEEVFRRKQA
RAASASTASHAQLPSSSSWGQQSVNSSSSTQNSFSISDIQKLGDVRALREECRHQELLKL
IQQQQNSHPLWSKQNVSMKALLELQQESERHMQKQQQRAQQRAHGGHSLTSLPSQWGADS
SPLWGGHEKNSSISLWEESMKNAGPLARSLGLKNSRSSPSLGDTYNASCRQSRKKTDEEE
KLLKLLQGIHKPQDGFTQWCEQMLHALNTTSNLDVPTVVAFLKEVESPYDVHDCIRSYLG
DTVEAKEFAKQFLERRAKQRASQQRQQQQEAWLSSSSLQSLFQSNHSPKAPSFENSQAAK
IKRRPMMLHADPSILGYALHGSSSELETVEDY
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgagacactgaactttgggccagagtggctccgcgctctctccagtggcggg
agtgtcgcttcccccccaccctcccctgccatgccaaagtacaagctagccgaataccga
tacgggcgggaagagatgttagcactttacgtgaaagacaacaaggtcccggaggagatc
caggataaagagttctctgccattctccaggacgatcctctgcagcctctagcgttggtt
cccttaacggaagaggaacagaggaacttctccatgtctgtgaacagtgttgcggtgcta
aggctgatgggaaagggggctggggctcccccggccggagtctcccgggggagaggcagc
acccggagccgaggccgtggccgtggcgagagtggcttttaccaaagaagcattgaggag
gcagaaggggcgtttggccgcggtggggtccgcgagatacatcgcagccagagttgggat
gaccgaggagaacgacggtttgagaagccaatccgacgggaaggagcttatccgccgccg
tctccctccttatttgaagcccgggctccgtttgaggaggtggttcccccggggcgcaag
gagtttgcccgctcggacagcgacaactggcgcaccctccgagaggagcacgaggaagag
gaagagggcagcagcggtgctgtggccgtggccgggggcagctggcggcagagtggaggc
ccccggcgggagagcgagcgctggcggtctgctagcccagacggaggaggccctcggtcc
gcgggctggcgggagcacggcggagaagggcgccggcggaagttcgattttgacttccga
gagcgggaggacgagccgcggagcgggcgccggcaccggcacaacagcgacagcttcgag
gacgacaaggacggcctccccgagtggtgcctggaggacgaggaagaggagatggggacc
ttcgactcctccggggccttcatgtccctcaagaagagccccaaagagacgatccttgag
gagcaggagttaagcttccagcccctgcaagaagaggaagaggaggaggagctgccggag
gccaaggacggcgacaggagagagggcggggaggtccctgccagccccactgccaaggag
gggccagagagagaacggaaggagccccggcaagtgccggaggagaaactgcctgctcct
cccggtgccccgtggcgaacgggcccctctttccccactgctactgcccccgtgggtgaa
tgcgagagtgtcgcgccaggggtctcgtcaaaggtggaggcctcggggctggcgcctggt
ggcaacaaggagaaggaagctctcgatggggatccgtgcctcctcagccacccggctcag
ctcaacccggctgctgtggctgcccttcccacgccggcgtcctcgtccgcaactgctgct
gctgctactactgaattcacagttggggacaacgaggatgaggacgggatgaaccacctg
cagcaggaagcggaaaagatggtggcttccttgcaggacagctctctggaggaggagcac
ttcacccagaccatcgtggaccatcgcaacacagccgctgccttgccgctctcccacgag
gcagccatgaagtggttctacaaggatccccagggggaaatccaaggccccttcacgact
caagagatggctgagtggttccaggccggctacttcaccatgtccctgctggtgaagcgt
ggctgcgacgagggcttccagccgctgggcgaagtcattaagatgtggggaagagtgcct
ttcgctccgggtccatcgccccccccattgctgggaaacatggaccaggagcgcctgaag
aagcagcaggagctggcgaccgctgccctctaccagcagctccagcaccaacagctgctt
cagcttgtcaacagcaggcagtatgcccagtgctccctccagcagaaggtggcggcgggg
gacctgacgcagcaacagctcaccgccttcctgcagcagctgcaagctctcaagccaaga
gccggggagcagggaatgattccttctatgaaccgatcaatatctgtgccagataccggg
tccctgtgggacacacatacctcagcctcaccgcaagcaggcggtgaggccagcttatgg
gatatttcaattaattcttcaactcagggtccaatcttagaacaacttcaactgcaacat
aaactacaagagcggagaggcgccgaactcagggctaagagggacgaggacgagcggaag
cggcgccaggaggagcagaagcgccgcgaggaggaggaggtgttccggcgcaagcaggca
agggcagccagcgccagcacggcctcccatgcgcagctaccctcttcctcgtcgtggggc
cagcagtccgtgaacagctcttcttccacccagaacagcttcagcatctcggatatccag
aaactgggggacgtgcgggccttgcgggaagagtgccgccaccaggagctcctgaagctg
atccagcagcagcagaactctcacccgctgtggtccaagcagaacgtctccatgaaggcc
ctgctggagctgcagcaagagtccgagaggcacatgcagaaacagcagcagagggcgcag
cagagagcccacggcggccatagtctgaccagcctcccgtcgcagtggggggctgactca
agcccactgtggggcggccacgagaagaacagctccatcagcctctgggaggagagcatg
aagaacgctggccccctggcccggagcctgggcttgaagaacagccgcagcagcccgtcc
ctgggggacacgtacaacgcctcctgtcgtcagagccggaagaagacggacgaggaggag
aagctgctgaagctgcttcagggaatccacaagccgcaggacggtttcacacagtggtgt
gagcaaatgctccatgccctcaataccaccagcaaccttgatgtccccactgtggtggcc
ttcctgaaggaggtggagtctccgtacgatgtccacgactgcatccgctcctacctggga
gacacggtggaagccaaagagtttgcgaagcagttcctggagcgccgtgccaagcagaga
gccagccagcagcggcagcagcagcaggaagcctggctgtcctccagcagcctgcagtcc
ctcttccagtccaaccacagccccaaggccccgtccttcgagaacagccaagccgccaag
atcaagaggcgcccgatgatgcttcacgcggaccccagcatcctgggttacgctcttcac
ggctcctcgagcgagctggaaacggtggaggactactga
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