Podarcis raffonei (Aeolian wall lizard): 128399797
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Entry
128399797 CDS
T09310
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128399797 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128399797 (HSPD1)
03110 Chaperones and folding catalysts [BR:
praf03110
]
128399797 (HSPD1)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128399797 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
praf04147
]
128399797 (HSPD1)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
128399797 (HSPD1)
Messenger RNA biogenesis [BR:
praf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
128399797 (HSPD1)
Chaperones and folding catalysts [BR:
praf03110
]
Heat shock proteins
HSP60 / Chaperonin
128399797 (HSPD1)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
128399797 (HSPD1)
Exosome [BR:
praf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128399797 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
128399797 (HSPD1)
Exosomal proteins of breast cancer cells
128399797 (HSPD1)
Exosomal proteins of colorectal cancer cells
128399797 (HSPD1)
Exosomal proteins of bladder cancer cells
128399797 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4777
Motif
Other DBs
NCBI-GeneID:
128399797
NCBI-ProteinID:
XP_053217528
LinkDB
All DBs
Position
1:126671177..126685680
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AA seq
571 aa
AA seq
DB search
MLRLPTVLRQIRPVSRALAPHLTRSYAKEVKFGADARALMLQGVDLLADAVAVTLGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAREGFEMISKGANPVEIRRGVMLAVDAVIEELKKLSKPVTTPEEIAQVATISANGDK
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANNHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAVATGGAVFGEEGLTINVEDIQPHDFGKVGEVIVTKDDCLLLKG
KGDKVQIEKRIQEIVEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDTLTPANEDQKIGIEIIKRTLKIPAMTIA
KNAGVEGSLIVEKIMQSAADVGYDAMLGEFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKETAMGGMGAGMGGGGMF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttaccaacagtgctgcgtcagataaggccggtgtccagagcactggccccg
caccttacaagatcctatgcaaaagaagttaaatttggagcagatgctagagctcttatg
ctgcagggcgttgatcttctcgctgatgctgtggccgtcaccttgggaccaaaggggaga
acagtaattattgaacagagctggggaagccctaaggtgacgaaagacggcgtgacagta
gccaagtcaattgacttgaaggacaagtacaagaacattggagccaagttagttcaggat
gttgccaacaataccaatgaagaggcgggagacggtactacgactgcaacggtactggca
cgttcgattgccagggaggggtttgaaatgatcagtaaaggagcaaatccagtggagatc
aggagaggggtgatgctcgctgtagatgctgtaattgaggaattgaagaagttgtccaaa
ccagtcacaactccagaagaaattgctcaggttgctacaatatctgcaaatggcgacaag
gaaattggcaacataatctctgatgccatgaaaaaagttggacgaaaaggtgttatcaca
gttaaggacgggaaaactttgaatgatgaattagaaattattgaaggcatgaagtttgat
agaggctacatctctccctacttcattaatacagccaaaggacagaaatgtgaattccaa
gatgcttacgtgttaatcagtgaaaagaagatttctagtgttcagtccatagtaccagct
cttgaaattgccaataatcaccgcaagcctttagttattattgctgaagatgttgatgga
gaggccctcagtacccttgtattaaacagactgaaggttggcctacaggttgttgccgtg
aaagcacctggttttggtgacaatagaaaaaatcagcttaaagatatggcagttgctacc
ggtggtgctgtgtttggggaagaaggcttgaccataaatgtagaagacattcaacctcat
gattttggtaaagttggagaagtcattgtgacgaaagatgactgtttgctacttaaaggg
aaaggcgacaaagtacaaattgaaaagcgcattcaggaaatagttgaacaactggaggtt
acaacaagtgaatacgagaaggagaaactcaatgaacgcctggccaaactttctgacgga
gtagctgtactaaaggttggaggaacgagtgacgttgaggtgaatgagaagaaggacagg
gtcacggatgccctcaatgccactcgtgctgccgtagaggaaggcatcgttctaggaggc
ggctgtgcgctgcttcggtgcattccggcactagatactttgactccagccaacgaagat
cagaaaattggtatcgaaattatcaagagaacactgaaaatcccagcaatgactattgcc
aaaaatgcaggcgttgaaggatcgctgatagttgagaaaatcatgcaaagcgcagccgac
gttggctacgacgccatgcttggggagttcgtaaacatggtagagaaaggcatcattgat
ccaacgaaggttgtaaggacagccttgatggatgcagcaggtgttgcttcccttctgtct
acagctgaagccgtagtaactgaaattcctaaagaggagaaggaaactgccatgggaggc
atgggggctggcatgggcggtggtggcatgttctaa
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