Podarcis raffonei (Aeolian wall lizard): 128400101
Help
Entry
128400101 CDS
T09310
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128400101 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128400101 (SMARCD2)
03036 Chromosome and associated proteins [BR:
praf03036
]
128400101 (SMARCD2)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128400101 (SMARCD2)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128400101 (SMARCD2)
PBAF complex
128400101 (SMARCD2)
GBAF(ncBAF) complex
128400101 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
128400101
NCBI-ProteinID:
XP_053218084
LinkDB
All DBs
Position
13:complement(25106400..25141399)
Genome browser
AA seq
530 aa
AA seq
DB search
MAGRGGFPLTPPPPQPGGPPPVASAALSALPPPAPGLLRGPSPAGATPYRAMGHAPPFQR
PGILPGGRMPMAGLQVGSPSGPLYGSPSPMRPGMPQSMMDPFRKRLLVPQTQPPPSLSQR
RGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKR
KLRIYISNTFTPGKEESEGSERIASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKEL
YGPDNHLVEWHRMATTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVH
TQTRASIMQALWLYIKHNKLQDSHEREYINCNRYFRQIFGCIRMRFSEIPMKLAGLLQHP
DPIVINHVIRNSSWGDVDSQPSSQPPVPTHPSSVDPNDQKKTACYDIDVEVDDPLKAQMS
NFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSNNPQDFIQEWIRSQQRDLKI
ITDVVGNPEEERRAEFYQQPWMQEAVGRHIFAKVQQRRQELEQVLGVRLT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccggccgcggggggtttcctctcacgccgccgccgccgcagcccgggggcccccct
ccggttgcttcggcggcgctgtccgcccttcctccgccagctccggggcttttgcgggga
cccagcccggccggggccaccccgtaccgggccatggggcacgcgcctccgttccagcgc
cctgggattctgcctggtggccggatgcccatggcaggattgcaagtgggatccccctct
gggcctctgtatggatcaccttctccaatgagacctggaatgccacagtccatgatggat
ccgttccggaagcgcctgcttgttccacagacccaaccacctccatcactatcccaaagg
cgagggctcaaaaggaggaagatggcagacaaggtcctgccacagaggattcgtgagcta
gtcccagagtctcaggcctacatggatttactggcctttgagcgcaagctggaccagact
attgcccgcaagaggatggaaatccaggaggcaatcaagaaacctttgacgcaaaagcgg
aagcttcgcatttacatctccaatacctttacgcctggcaaggaagaatctgaaggcagt
gaacgcatagcttcgtgggaacttcgtgtggaaggcaaactcttagacgatccaagtaaa
cagaagaggaagttctcatcctttttcaagagcttggtcattgaactagacaaagagctg
tatggcccagacaaccacctggtggagtggcaccggatggccacaacccaagagacagat
ggcttccaagtcaagcgcccaggtgatgtcaatgtgaaatgcacccttctgctcatgctg
gatcatcagcctccccagtacaagctggatccccgtttggctcgccttctgggcgttcac
actcagactcgggccagcatcatgcaggctctgtggctctacatcaaacacaacaagctc
caggacagtcatgagcgagagtacatcaactgcaaccgatactttcgccagatctttggc
tgcatccgcatgcgattctctgagatccccatgaagctggcggggctcctgcaacatcca
gatcccattgttatcaaccatgtgatcaggaacagctcttggggagatgtagattctcag
ccctcatcccagcctcctgtccctacccacccctccagtgtggaccctaatgaccagaag
aagactgcctgttacgacattgatgtggaagtggatgaccccttgaaggcccaaatgagc
aacttcttggcctccactaccaaccagcaggaaattgcctccctggatgtcaagatccat
gaaaccattgagtcgatcaaccagctgaagacacagcgagattttatgctgagtttcagc
aacaatccccaggacttcatccaggagtggatcagatctcagcagagggacttgaagatc
atcaccgacgtggttgggaaccctgaagaggagaggcgtgcggagttctaccaacaaccg
tggatgcaggaggctgttgggagacacatctttgccaaggttcagcagcgcagacaagaa
ctggaacaagtgcttggcgttcgccttacctag
DBGET
integrated database retrieval system
