Podarcis raffonei (Aeolian wall lizard): 128400205
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Entry
128400205 CDS
T09310
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128400205
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128400205
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128400205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_4
ANCHR-like_BBOX
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
128400205
NCBI-ProteinID:
XP_053218271
LinkDB
All DBs
Position
13:complement(55404314..55408945)
Genome browser
AA seq
768 aa
AA seq
DB search
MAAKAPSLSEALTSGFLTCTICLERLRRPKILPCLHSYCQECLRKLAGGRKELQCPECRE
RVALPEGGVGALRTNFFINGLLDLVRPTGEAEPTCSLCPLIGQETSRPAVSRCLDCADDM
CQDCASGHRCSRLTHLHRVVAMKDYLSGEHDEEIRKRQALQCKEHTGEELRFFCTPCAVV
LCRECRLGAHLQHPCLPLAEAAQARRPVIVELLAGVEETVQVIRTGRASLEREAARLQVR
EASIRDAVEEACSRAVQRLLAQQEEVLAQLADYVKEQQKACQALCSDLEFQEQVASSTVA
FAQKVLSLGREVEIVSLEQVICERLRHLQGFSWEPLATRLPCLEVNAEIEGSGPRLFHLE
FREESPTGVPESPQEAATKGAKKKTHLPCLEVDAEIEGSGPRLFHPEFREESPTGVPEGP
QEVATKGAKKETHLPCLEVNAEIPTGVPEGHKKAATKGAKKKRRKQQQQVPPVKEGFHMT
TLILRGCQQAVAPVPPPKVPGTPLLTPKPLFSCSFCVKSPSDQKCPLVTGLCPFGSGELL
VADNQNKNLKRFSLQGEFKGTVPVPSGVAPVSLATVGSKVAFTAGSCLYLLNAEGELVWQ
KALGQGQASHAVAALGENHLAVCVAGQLEVYDLEGRLLEKIVPEGSGERCLVFLANHKDG
FVGSDWYHRSVVLFTRTGQLVAECSEEQLGECQPGGICADVMGIIYVVLRELNKVVAFSP
SGEDLGAFLTAENSIDQPRVVTVAREGRFAVALSNGTVHIFRIRYQGK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggccccatccctctccgaagccctcaccagcggcttcctgacctgcacc
atctgcctggagcgcctccgccgccccaagatccttccctgcctgcacagctactgccag
gagtgcctgcggaagttggcagggggccggaaggagcttcagtgccctgagtgccgtgag
cgggtggccctcccagaggggggcgtgggcgccctccggaccaacttcttcatcaacggc
ctgctggacctggtccgccccacaggggaagcagagcccacctgcagcctctgtccgctc
atcggccaggagaccagccggccggccgtctcccgctgcctggactgcgccgacgacatg
tgccaggactgcgccagcgggcaccgctgctcccgcctcacccacctccaccgcgtggtg
gccatgaaggactacctctccggagagcacgacgaggagatccggaagcgccaggcgctg
cagtgcaaggagcacaccggcgaggagctgcgcttcttctgcacgccttgtgccgtcgtc
ctctgccgggagtgccggctgggggcccacctccagcacccttgcctgcccctggctgag
gcggcccaggcccgccggccggtcatcgtggagctcctggccggggtggaggagacggtg
caggtcatccggacggggagggccagcctggagagggaggctgcgcggctgcaggtgcgc
gaggctagcatccgggatgcggtggaggaggcgtgctcgcgggcggtgcagcggctgctg
gcgcagcaggaggaggtcctggcccagctggcggactacgtgaaggagcagcagaaggcc
tgccaggccctctgctccgatctggagttccaagagcaggtggcctccagcaccgtggcc
tttgcccagaaggtgctgagtctggggagggaggtggagattgtctccctggagcaggtc
atctgtgagcgtctcaggcatctgcagggcttctcctgggagccgctggccacccgcctg
ccctgcctggaggtcaacgctgagatcgagggcagcggcccccgcctgttccacctggag
ttccgagaggagagccccactggagtgccggagagcccccaggaggcagccacaaaaggg
gcaaagaagaagacccacttgccctgcctggaggttgacgctgagatcgagggcagcggc
ccccgcctgttccacccggagttccgagaggagagccccactggagtgccggagggcccc
caggaggtggccacaaaaggggcaaagaaagagacccacctgccctgcctggaggtcaac
gctgagatccccactggagtgccagagggccacaagaaggcggccacaaaaggggcaaag
aagaagaggaggaagcaacagcagcaggtgccgcctgtcaaggagggattccacatgacc
accctcatcctcaggggctgccagcaagccgtagcccctgtgcctcctcccaaggtccca
ggaaccccccttctgacacccaagcctctcttctcatgtagcttctgcgtcaagagcccc
agcgaccaaaagtgccccctggtcacagggctctgcccctttggctctggagagctgctg
gtggccgacaatcaaaacaagaatctgaagcgcttctccctgcagggggagttcaagggc
actgtccccgtccccagtggcgtggccccggtcagcttggccactgtgggcagcaaggtg
gccttcacggccggctcctgcctctacctcctgaatgctgagggtgagctggtgtggcag
aaggccctggggcaggggcaggccagccacgccgtggcagcactgggggaaaaccatctg
gcagtgtgtgtggctgggcagttggaggtgtacgacctggaggggcggctgctggagaag
attgtgcccgagggcagtggggagaggtgcctcgtcttcctggccaaccacaaggacggc
tttgtgggctcagactggtaccaccgcagcgtggtcctgttcaccaggacggggcagctg
gtggccgagtgctctgaggagcagctgggcgagtgccagccagggggcatctgtgctgac
gtcatgggcatcatttacgtggtcctgcgggagctgaacaaggtggtggccttctccccc
agcggggaggatttgggggcgttcctcactgccgagaatagcatcgaccagccgcgggtg
gtcacagtggctagggaggggcgctttgccgtggctctgagcaacggcaccgtccacatc
ttccggatcaggtatcagggcaagtga
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