Podarcis raffonei (Aeolian wall lizard): 128400702
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Entry
128400702 CDS
T09310
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128400702 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128400702 (CHRNE)
Ion channels [BR:
praf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128400702 (CHRNE)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
128400702
NCBI-ProteinID:
XP_053219104
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Position
13:complement(54851043..54877406)
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AA seq
512 aa
AA seq
DB search
MGRRVWLGALLCWGSFWLLEANEDLRLYKHLFDNYDKGARPVRNEGDVVEVSIKMTLTNL
ISLNEKEETLTTNVWITHQWFDYRLEYKSEDYGGISALQVPADKVWLPDIVLENNIDGNF
QVAYFCNVLIYPGGSIFWLPPAIFRSTCAIEVTFFPFDWQNCSLVFRSQSYNAREVVLTF
GGDDQTGEPVEEIVIDPEAFTENGEWAIQHRPARKALAPVSGVEAPGFSEMRYYLIIQRK
PLFYIINIIIPCVLISSLVVLVYFLPAESGGQKITVSISVLLAQTVFLFLIAQKVPETSL
SVPLIGKYLLFVMVVATLIVTNCVIVLNVSLRSPSTHTMSQRLKHVFLELLPRYLGSSLE
PAEEDPWDAPRPRRRSSFGVILKAEEYILKKPRSEILFERQGKRHGLQRVPGYSTAYGLD
VGGTSTLYKNLASLAPEIKGCVDACNFIAESTREQSADSAEMENWVLIGKVIDKMCFWAA
MALFAIGTLAIFAMGQLNAAPSNPFPGEELQK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaagagtctggctgggggctctcctctgctgggggtccttctggctgctggag
gccaacgaggacctccgcctctacaaacaccttttcgacaactacgacaaaggggcccgg
ccggtgcgcaacgagggggacgtggtggaggtcagcatcaagatgaccttaaccaacctc
atctccctgaacgagaaggaggagaccctgaccacgaacgtctggattacacatcaatgg
ttcgattaccggctggaatacaagagcgaggactatggcggcatctcggcgcttcaggtc
cccgcggacaaggtctggcttccagacatcgtgctggaaaacaacatcgacgggaatttc
caggtggcttatttctgcaacgtcctgatctaccctggggggtccatcttctggctgccc
ccagccatcttccgcagcacctgtgccatcgaagtcaccttcttccccttcgactggcag
aactgctccctcgtcttccggtcccaatcgtacaacgccagggaagtggtgcttacattt
gggggcgacgaccagaccggggagcccgtggaggagattgtgattgacccagaggctttc
acagagaatggggagtgggccattcagcaccggccggcccgcaaggccctggcccccgtc
tccggggtggaggcccccggcttctcggagatgcgctactacctcatcatccagcgcaag
cccctcttctacatcatcaacatcatcatcccctgcgtcctcatctcctcgctggtggtc
ctggtctacttcctgcctgccgaatctggaggccagaaaatcaccgtcagcatctctgtc
ctgctggcccagactgtcttcttgttcctcatcgcccagaaggttccggagacctcgctc
agcgtccccctgatcggaaagtacctgctgtttgtgatggtggtggccaccctgattgtc
acaaactgcgtcatcgtcctcaacgtctccctgcgcagccccagcacccacaccatgtcg
cagcggctgaagcacgtcttcttggagctccttccacgctacctgggctccagcttggag
ccggcggaagaagacccctgggacgccccccgccctcgacggcgcagctccttcggggtg
atcctgaaggcggaggagtatatcttgaagaagcctcgaagcgagatcctctttgagcgc
cagggaaagcgccacgggctccagagggtgccaggatacagcacggcttacggcctggac
gtgggggggaccagcaccctttacaagaacctggcaagtctagcccccgaaatcaaggga
tgtgtggacgcctgcaacttcattgccgagagcaccagggaacagagcgcggacagtgcg
gagatggagaactgggtgctgatcgggaaagtgattgacaagatgtgcttctgggcagcc
atggccctcttcgccatcggaaccctcgccatcttcgccatggggcaactcaacgccgcg
ccaagcaaccccttcccgggagaggagctccagaagtag
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