Podarcis raffonei (Aeolian wall lizard): 128400785
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Entry
128400785 CDS
T09310
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128400785 (CASC3)
03015 mRNA surveillance pathway
128400785 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128400785 (CASC3)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128400785 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
128400785
NCBI-ProteinID:
XP_053219251
LinkDB
All DBs
Position
13:complement(26638973..26657722)
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AA seq
708 aa
AA seq
DB search
MADRRRQRASQDSSEDEESDSPPGSAAPSPRGAHRSGLAVAGGGGGGGAAVDAVSAEAPV
TVGGSPADSECESEDGIEGDAVLSDYESADDSEAEEGEYSEEETSKVDLKRESNETNELT
RKSDKGDEKPESKGTVAGERQSGDGQESTEPIENKVGKKLPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELVALYGYDIRS
THNPDDIKPRRVRKPRFGSPPQREPDWANERPSKPPRHQSLESTPVPPRTFINRNSAGTG
RMPPPRTFPRPGGYKESRPCYRAVDVNSQHAPRFSEQSKHESNYRSRRLEPLPPREPSPE
VEIPHIRNSPVKKEEVVSESPAAPADVLQPPPDRPVEKKSYSRARRTRTKAGETGKLAEE
VPLPLGLTPAPLKTTEVIPSPSPAKTGNWEVPVEASLDGLEQDITQLNITEQNWSPGQPQ
FIQPQGIPNQMHIGAAPPPQFNRMEEMGVQAGRAKRYSSQRQRPVPEPAPPVHISIMEGH
YYDTLQFQGPIYTHSENPAPLPPQGVIVQPEMHLSHPGLHPHQTPAPLTNPGLYPPPVSM
SPGQQPPPPPPQQLLAPTYFSPPPGVMNFGNPSYPYPPGPLPPPPPPHLYSNAQAQSQVY
GGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVVNRAPVNISKRY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgtcggaggcagcgcgcctcgcaggacagcagcgaggacgaggagtccgac
tcgccgcccggcagcgcggccccttccccgcggggcgcccaccgctctggcctggccgtg
gcgggagggggcggcggcggcggcgctgctgttgacgccgtgagcgcggaggcgccggtg
acggtgggaggcagccccgccgactcggagtgtgaaagtgaagacggcatagaaggagat
gctgttctttctgactatgaaagtgctgacgactcagaggctgaggagggggaatacagc
gaggaggagacatccaaagtggacctgaagcgggagagtaatgaaactaatgagctgaca
agaaaatcagacaaaggggatgaaaaaccagaatcgaaaggcactgtggcaggcgagagg
cagagtggggatggccaggaaagcactgaaccaattgagaacaaggtgggcaaaaagctt
cctaagcacctggatgatgacgaggaccggaagaaccctgcatacatacctcgcaaaggt
cttttctttgagcatgaccttcgtgggcaaactcaggaagaggaagtccggcctaagggc
cgccagcgcaagctgtggaaagatgagggacggtgggagcatgacaagttccgggaagac
gagcaggcaccgaaaacaaggcaggagctggttgctctttatgggtatgatatccgctca
acacacaaccctgatgacatcaagcccaggagagtgcgcaaaccaagatttgggagtcca
ccacagagagagccagattgggccaatgaacggcctagtaaaccgccacggcaccagagc
ctagaaagtactcccgtgccacccaggacattcatcaataggaactccgcagggacagga
cggatgcccccaccgaggactttcccaagacccggtggctacaaagagagccgtccatgc
taccgggctgtggatgtgaacagccagcatgcgcctcgcttcagtgagcagtcaaagcac
gagagcaattaccgttccaggcgtttggagcccctcccaccacgagagccttctcctgaa
gtagagattccgcacattcgcaacagccctgttaaaaaggaagaagtggtttcggaaagc
ccagcagctcctgcagatgttctgcagccaccaccagataggccagtggagaagaagtcc
tactcccgggcaaggaggactcggaccaaagcaggcgagacggggaagttggccgaggaa
gtcccgcttccattggggttgactcctgcacctctgaaaactactgaggttataccatcc
ccttcgccagcaaagactggtaactgggaggtgcctgttgaagctagcctagatgggctc
gagcaagatataacccagttaaatataacagaacagaactggagtccagggcagccccag
ttcatacaacctcagggtattcctaaccagatgcacattggagcagccccaccccctcag
ttcaacaggatggaggagatgggtgttcaggcaggccgtgcaaagcgttactcatcgcag
cgtcagaggcctgtcccagagcctgctccacctgtgcacataagcataatggaagggcac
tactatgacacactacagttccagggaccgatctacactcacagcgagaatcctgccccg
ctgcctccccaaggggtgattgttcagccagaaatgcatctctcccatccagggttacat
ccacaccagacaccagcacctttgaccaaccctggtttatatcctccacctgtctccatg
tcgccgggacagcagccgccgcctcccccaccgcaacaactgctagcaccgacctacttc
tcccctccccctggagtgatgaattttggcaatcccagttacccctaccctccaggacca
cttccgccgccaccacctccccatctgtattccaatgctcaagcccagtctcaggtgtat
ggaggggtcacctattataacacagtccagcagcaagtgcagcccaaaccttcaccaccc
cgaagaacttcgcagcctgtcactatcaagcccccacctcctgaggttgtaaacagggct
ccagttaacatttctaaacgctattga
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