Podarcis raffonei (Aeolian wall lizard): 128400822
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Entry
128400822 CDS
T09310
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
praf03015
mRNA surveillance pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128400822 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
128400822 (ACIN1)
03015 mRNA surveillance pathway
128400822 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128400822 (ACIN1)
03041 Spliceosome [BR:
praf03041
]
128400822 (ACIN1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128400822 (ACIN1)
Spliceosome [BR:
praf03041
]
Complex C
Other components
EJC/TREX
128400822 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
128400822
NCBI-ProteinID:
XP_053219385
LinkDB
All DBs
Position
13:complement(49148846..49184708)
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AA seq
1245 aa
AA seq
DB search
MADGEEVTLDGRPLQALRVADLKAALEQRGLAKSGQKSALIKRLRGALMLENLQKHSTPH
TTFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAADSESKSCIVSREREESDE
EGPRRPEQHPTRVRQARAVKTPGAAHAPSSEERETPLRSRRAAQRAPVKEEEEEEEEDDD
EEDDDEDDEEEEEEAAALPAKQTPKGQAEPGAPAPLEKGACQPSLPIAPQAQPKEATAQT
PDAPVCGVAVPLLPPSKGLAEAEPAAPECREEQPATVTQEGPQEEKRGPEVPGPPEEAEP
VEAAAQLPEALKAEVAKEAGPCLEERGATAPREAQGEQGVGLRGWGAPAVPLQPQQVVAE
EIQRDEDQEEAAEALKTLEEETAAAAAALVQDSPSPPQLTEAQHAQQDDGGEEPPPPLLT
KEAPGPSPAEDEEAPPQLSQPSPPAQEVPAAAASPGPPEERPGHPPSPLQRPRERPAGSS
SSRSSSSASSSSRSRSRGSSQPRSRARRPRSGSSESPARKRRASGSPSRSGSERHSSSCS
RSRSRSRSRSPSSSGSSRKSRSPEASRDGSSYPHTKETSPTGESPPRHSPQTQQDGSSSP
REKRRNTLPLPSEPQRHPSHGQEQEQQEEEEEEMEMTVPERGSPEPPTPMEASGLDTGVP
ASEPHRPSEQRHSENEEKQEVPMEPSEPRPESEAPEPGPDEHPSAEPPGPDPGPEDEEKK
EGSTQPKAFKRKISVVSSSVAKGTAAATNSDTEGSQPGGRKRRWGASTAATQKKPSISIT
TESLKSLIPEIKPPTGGQEAVVDLHADDSRISEDEAERHPEEPPHEKALKICRTVTQVVP
AEGQENGQGEEEEEEEKVHEEEPPEAPPAVAVEAVVLPPPVEHEVKKVTLSDTLTRRSIS
QQRSGVSITIDDPVRTAQVPSPPRGKVSSIVHICNLVRPFTLGQLKELLGRTGTLMEEAF
WIDKIKSHCYVTYSTVEEAVATRNALHGVKWPQSNPKFLSADFAEQDELDFHRGLLAERP
AEAKADEALALPGVGLGMRGEREMSRRSEAREREAAVREQWAEREREMERRERTRAEREW
DRDKVREGPRSRSRSRERRRKERPKSKEKKAEKKEKAQEEPPAKLLDDLFRKTKAAPCIY
WLPLTDTQYVQKQAERAARARERERRRKEQEAEEARQRERSRQAEREKRREHSRERERER
PNATGGGASRGGERSGRDRERREAKARHSRSRSRSTPVQDRGGRR
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggaggaggttactctggacgggaggccgctccaggcgttgagggtcgcc
gacctgaaggcggctctggagcagcgcggcctggcgaagagcgggcagaagagcgcgttg
atcaagcgcctccgcggggccctgatgctcgaaaacctccagaagcactcaacccctcac
accaccttccagcccaattcccagattggcgaggagatgagtcaaaacagcttcatcaaa
cagtacctggaaaagcagcaggagttgctgaggcaacgtctggaacgggaagctcgggaa
gctgcggattcagagagcaaaagctgcattgtgtcacgggagagggaagaatctgatgaa
gaaggaccaagaagaccggagcagcacccgactcgggtcaggcaggccagagctgtaaag
accccaggagccgctcatgccccaagcagcgaagagcgagagacgcctctcaggagtcgg
agggcagcccagagggctcctgtgaaagaggaggaggaagaggaggaggaggacgacgac
gaagaggacgacgacgaggatgacgaggaggaggaagaagaagctgccgcgttgccggcc
aaacagacgccgaaggggcaggctgagcccggcgccccagctcccctggagaagggtgca
tgccagccttccctgcccattgccccacaggcccagccaaaagaggccacggcccaaacc
ccggacgccccagtttgcggagtggccgtgccgcttctcccaccctcaaagggcctagca
gaggctgaacccgcagccccagagtgcagggaagagcagccagcaactgtgacgcaggag
gggccccaggaggaaaagaggggccctgaggtaccagggcctccagaagaggcagagccc
gtcgaggcggcagcccagctacccgaagcattaaaggcggaggtggccaaagaagcaggg
ccttgcctggaagaaagaggggcgactgctccccgcgaggcacaaggggagcagggggtg
ggcctgcgggggtggggggcccctgcggtccctctgcagccccagcaggtggtggcagag
gagatccagagagatgaggatcaggaggaagcagccgaggccctgaagactctggaggaa
gagacagcagctgccgccgccgccctggtccaggactccccttcccctccgcagctgacg
gaagcacaacacgcccagcaggatgacgggggcgaggagccccctccccccctcttgacc
aaggaggcccccgggcccagccctgcagaagacgaagaggcccccccccagctctctcag
ccatctccccccgctcaggaagtcccagccgccgctgccagccccggccccccggaggaa
cggcccggccacccgccatctcccctgcagcgcccgcgggaaaggcccgcgggctccagc
tcctcccgctcttcctcctccgcatccagctcctccaggtcccgctctcgcggcagctcg
cagcctcgctcccgcgccaggaggccccgctccggctcctccgagtcgcccgccaggaag
cggcgggcctcggggtccccgtcccgctctggctccgagcggcacagcagctcctgctcc
aggtctcgctccaggtcgcggtcccggtcgccttccagcagcggcagcagcagaaagtcc
cgtagccctgaagcctcaagggacggtagcagctacccccacaccaaagagacctccccg
acaggggagagccccccacgccacagcccacagacccagcaagatgggtcttcaagccca
agggaaaagcgaagaaacacccttcccctgccttcggagccccagagacaccccagccat
ggccaggagcaggaacagcaggaggaggaggaggaggagatggagatgacagttccagag
cgaggcagcccagagccccccactccaatggaggccagtggccttgacaccggggtccct
gcctcggagccacaccgcccgtccgaacagcggcacagcgaaaatgaggagaagcaagag
gtgcccatggagccgtccgagccccgaccagagagcgaggcccccgagcctggccctgac
gaacacccctccgcggagccccccggacccgacccgggccccgaagacgaggagaagaaa
gagggttcaactcagcccaaggccttcaagaggaagatatctgttgtctcatcatcggtg
gccaagggcacagcagcagcgacaaacagcgacacagagggaagccagccgggaggccgg
aagcggcgctggggggccagcacggccgccacgcagaagaaaccttccatcagcatcacc
acagagtccctcaagagcctgatccctgagatcaagcccccgacgggagggcaggaggca
gtggtggacctgcacgccgacgactcgcgcatctccgaagatgaggccgagcggcacccg
gaggagcccccccacgagaaagccctcaagatctgccgcaccgtcacgcaggtggtgccg
gctgaaggccaggagaacggccaaggagaggaggaggaagaggaggagaaggtgcatgag
gaagagccgcctgaggcgcctcccgccgtcgccgtagaggcagtcgtgctgccgccaccc
gtggagcacgaagtgaagaaagttacgctgagcgacactctgacgcggcgctccatcagc
cagcagcgctccggcgtctccatcaccatcgacgaccctgtccgcacagcccaggtcccc
tctccaccccgcggcaaggtcagcagcatcgtccacatctgcaacctggtgagacccttc
actcttgggcagctgaaggagctgctgggccggacaggcaccctcatggaggaagccttc
tggatcgacaagatcaagtcccactgctacgtcacgtattcaacagtggaagaagcagta
gcaactcgcaacgccctccatggcgtcaagtggccacaatcaaatcccaaattcttatcg
gcagactttgcagagcaagatgagctggatttccaccggggtctgctggccgagcgtccc
gcagaagccaaggcggacgaggccctcgctctccccggggtgggcctgggcatgcggggg
gagcgcgagatgtcgcggcgctcggaggcccgagagcgggaggcggcggtccgggagcag
tgggccgagagggagagagagatggagcgtcgggagaggacgagggccgagcgggagtgg
gaccgggacaaggtgcgcgaggggccccgctctcggtcccgatcccgggagagacgccgc
aaggagcgccccaagtctaaggagaagaaagccgagaagaaggaaaaggcccaggaagag
ccccccgctaaactgctggacgaccttttccgcaaaaccaaggcggccccctgcatttac
tggcttcctttgacagacacccagtacgttcagaagcaggccgagcgggcggccagggcc
cgggagcgagagcgccggcgcaaggagcaggaggcggaggaggcccgccagcgggagcgc
agccgccaagccgagcgggagaagaggcgggagcacagccgggagcgcgaacgggagcgc
cccaacgccacaggaggcggggccagcagggggggcgagcggagtggccgggaccgcgag
cggcgcgaggcaaaggcccgtcatagtcggagccggagtcgcagcacgcctgtacaggac
aggggggggcgccgctga
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