Podarcis raffonei (Aeolian wall lizard): 128400889
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Entry
128400889 CDS
T09310
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128400889 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128400889 (THOC6)
03041 Spliceosome [BR:
praf03041
]
128400889 (THOC6)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128400889 (THOC6)
Spliceosome [BR:
praf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128400889 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR54
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_EIPR1
WD40_like
GCK
Motif
Other DBs
NCBI-GeneID:
128400889
NCBI-ProteinID:
XP_053219546
LinkDB
All DBs
Position
13:complement(39899009..39909209)
Genome browser
AA seq
327 aa
AA seq
DB search
MDVQRSLELLHMTVYSQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKPVVSFV
AHEGPVYALVSTDRQLLSAGNGEVKAWNWSEIVKKGCKEAWSRRPPYGSSLEVPEINSLQ
LNLKDNSLLMAGGDCSIHMMDLESGAFTHEYQGHTDYIHCLALRDQLRECLSGSEDGTVR
LWDLRTGGQVQSIEVHKYEECNRPQNGKWIRCLATESDWMVCGGGPALTLWHLRSVTPTT
IFPVPQCQQQVMFYQDLILSAGHSPTINHLQISGEVKAQIPCIPRCIHSLSINEHSPEHK
VLTAAGSSHRIDVFTNFGYRAFSLTFS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggatgttcagcgatccctggaactcttgcacatgactgtctactcccagagtgtctca
ccatgtggcaagtacttggcagctgggaacaactatggagagattgccatcttcagcctt
tctgcagcactgagttcagaggctaaggaggagagcaagaagccagtggtgtcctttgta
gctcacgaaggtcccgtctatgccctggtttccacagaccggcagctgctcagtgctggc
aatggggaagtcaaggcctggaactggagtgagattgtgaagaagggttgcaaagaagcc
tggagcaggaggccgccttatgggagcagcttggaggtgccagaaatcaacagccttcag
ctgaacctcaaggataatagtcttctaatggctgggggagactgttccattcacatgatg
gatctggaatctggcgccttcacgcatgaatatcaaggccacaccgattatatccactgc
ctggcccttcgagaccagctcagagagtgcctgtcagggagtgaggatggcaccgtgcgc
ctttgggatttacgtactggaggtcaggttcaatcaattgaagtacataaatatgaggaa
tgcaacaggccgcagaacgggaagtggatccgttgcctggcaaccgagtccgactggatg
gtgtgtggtggaggcccagcgctcactctgtggcacctgcggtccgtcacacctaccacg
atattccccgtgccccagtgtcagcagcaagtcatgttctaccaggacttgattctctcg
gctggccacagccccaccattaaccatttacagatcagtggggaagtgaaggctcaaatc
ccttgcatcccacgttgcatccactctctttccatcaacgaacactcgccagagcacaag
gtgctgacagctgccggaagcagccatcgcatcgacgtcttcaccaactttggttaccgg
gccttttccctcaccttctcttaa
DBGET
integrated database retrieval system