Podarcis raffonei (Aeolian wall lizard): 128400911
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Entry
128400911 CDS
T09310
Symbol
SLX1A
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128400911 (SLX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128400911 (SLX1A)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128400911 (SLX1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
Cro
T5orf172
zf-HC5HC2H_2
FANCL_C
zf-RING_2
zf-RING_11
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
128400911
NCBI-ProteinID:
XP_053219586
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Position
13:complement(39248486..39252559)
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AA seq
265 aa
AA seq
DB search
MVVEVCNFFGVYLLYCTNPRYHGRVYVGFTVNPERRINQHNGGKRRGGAWKTSGRGPWDM
VLIIHGFPSDVAALRFEWAWQHPHSSRRLTHVTRRTSRERQFDFHLRVLAHMLQTAPWCR
LPLTIRWLKQEYCRDFPAGLEPPLHMPVAFGQVRAVKTKGVKPSEVNVATPKRCSICLKK
FQDGDNDIPLHCFHPGCTMAAHMTCLSRAFLEKEPLHFLPIEGQCPGCKNLVLWGDLVRH
HKGCYGNLEADPTSSQEHWTNELQL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggaagtgtgcaacttctttggggtctaccttctgtactgcaccaaccctcgt
taccatggccgagtctacgtcggcttcactgtcaatcctgagcgacgcatcaatcagcac
aatggcgggaagcgacgcggtggggcttggaagacgagcggccgtggtccttgggacatg
gtgctgatcatccatggtttcccttctgatgtggctgctctgcggtttgagtgggcttgg
cagcatccgcactcctcccgccgcctcactcacgtgactcgccgcacttcgcgggagcgt
cagtttgacttccacctgcgtgtcttagcccacatgctccaaactgctccttggtgccgt
ctgcccctcaccattcgctggctcaagcaggaatattgcagggacttccctgcaggcctg
gaacctccgctacacatgccggtggcctttgggcaggtccgagctgtcaagaccaagggg
gtgaaaccttcagaggtgaatgtggctactccaaaacgctgcagtatctgtctgaaaaaa
ttccaggatggtgacaatgacatccccttgcactgcttccaccctggctgcaccatggct
gctcatatgacttgtttgtcccgggctttcctagagaaagagccacttcacttcctgcca
atcgaagggcagtgcccgggctgcaagaatcttgtgctctggggggacctggttcgtcac
cataaaggctgttacggcaacctagaagctgatcccacctcctcccaggagcattggact
aatgagctgcagttgtga
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