Podarcis raffonei (Aeolian wall lizard): 128401022
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Entry
128401022 CDS
T09310
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128401022 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128401022 (APEX1)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
128401022 (APEX1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
128401022 (APEX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
128401022
NCBI-ProteinID:
XP_053219822
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Position
13:complement(42220203..42228124)
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AA seq
317 aa
AA seq
DB search
MPKRGKKKEGEALPEEKETVAEPEPKKAKKGGAKAEKEADGPILYQDPPDKLTSPSGKKY
TLKVTSWNVDGIRAWFKKKGLEWVCEEKPDILCLQETKCAEKQLPAEIRDLADYPHKYWA
CSDDKEGYSGVALLSKAKPVDVTYGIGEEEHDKEGRVITAEFPSYFLVTAYVPNAGRGLV
RLEYRQRWDVAFRSYLQGLAARKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGF
GKLLEAGFADTFRHLYPDTPYAYTFWTYMMNARAKNVGWRLDYFVVSKDLLENVCDSKIR
STALGSDHCPITLYLAV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacggggcaagaagaaggaaggtgaagccctgcctgaggagaaggagacagtg
gcagaaccagagcctaagaaggctaagaaaggtggggcgaaagctgagaaggaggccgat
ggtccaatcctgtaccaagacccccctgacaaactcacctctcctagtggcaagaaatac
accttgaaggtcacctcctggaatgttgatggaatccgagcctggtttaagaagaagggg
ctggagtgggtgtgtgaggagaagccggacatactctgcctccaagagacaaaatgcgcg
gaaaaacagctgccggccgagatccgggatctggccgactatccccacaagtactgggcc
tgctctgacgacaaggaaggctacagtggggtggccctcctctccaaggccaagcctgtc
gatgtcacctacggtatcggcgaggaggagcatgacaaggaaggccgggtgatcacggcc
gagttcccctcctacttcctggtgacggcctacgtccccaacgcgggccggggcctggtg
cgactggagtaccgccagcgctgggacgtggccttccgctcctacctgcaaggcctggcc
gcccgcaagccgctcgtcctctgcggggacctcaacgtggcccaccaggagatcgacctg
aagaaccccaagggcaacaagaagaacgccggcttcacccctgaggagcgggagggtttc
ggcaagctgctggaggccggctttgccgacacgttccgccacctctaccctgacaccccc
tacgcctacaccttctggacctacatgatgaacgcccgggccaagaacgtgggctggcgg
ctcgactactttgtggtctccaaagacctgctggagaacgtctgcgacagcaagatccga
tccacggccctggggagcgaccactgccccatcaccctgtacctggccgtgtga
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