Podarcis raffonei (Aeolian wall lizard): 128401294
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Entry
128401294 CDS
T09310
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
praf01002
]
128401294 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128401294 (USP42)
Enzymes [BR:
praf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128401294 (USP42)
Peptidases and inhibitors [BR:
praf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128401294 (USP42)
Ubiquitin system [BR:
praf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128401294 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128401294
NCBI-ProteinID:
XP_053220103
LinkDB
All DBs
Position
14:42982827..43020633
Genome browser
AA seq
1302 aa
AA seq
DB search
MTIVDKTSESSKPSASEKQPFSSVAPASGEMDSGSAGWGAVSSSLEAPKHKISLGPVPGA
AVYSNSSVPEKSKPSAQKDLSAVGDGITAPQKVLFPAEKICLKWQKTHRVGAGLQNLGNT
CFLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQGHITQALSNSGNVIKPMPV
INDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHTQATTFIHQIFGGYLR
SRVKCMNCKGVSDTFDPYLDITLEIKSAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVP
ASKRFTIHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYALYAV
LVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFYIRSHDMKNGG
EHIHSVHTPGQSSPRPVINQRVVNKQTAPGFIGPQLPPHMIKNSNHLNGTASLKETPSGS
VAIASNVTLTRPSSAPPAMSIPNWTMNRPTTAATPDPSKKQKITISIHNKLSARQSVSHA
SCTLDNPSKPAPSSTISSPAAVQSTSSAPAVSAPNQVPKQMPPSEPCSKLVVNGKSKLNP
STLVPYGAESSEDSDEESKGLVKENGHAAPLNGILAENAASALEGSCLSCHNAEKEAPQH
EAPKNITVLVSISINDTPKQNGQICNDSTSQAKPAKSAENPFSKANGLPGKGVPTALPPV
PEDRILDSFRYNQLKTSSGEISGSGTEKTDGPSEEGASTLPNNIQTHLAPSDPEITSTTE
DPCERTVAKTESTPLESDGQHDPKSSSLGAEEDFPREGDVEDHPEQMRGPKEGKAVWEKS
PEPVRGAAEKGVPSPLFTRSDGECSSPKLATVNVAEKSQETQDSAERYEDVPPPGEPSVT
RLDPVGGSQCSKDDGRLGESSSKQFIGNTERQELKSHSPLKEKISTSKKIDKEHYRSKRK
RSESEEEEEEEAAVAPRGQPEGHYPKKWCSYSRERAKQEHYRREYYNANYYRFPCSPDPE
RGMGKYPSYRSRSRGKTDPERSRHCYGKGEQSWSKERYYQDGPRRWESCRPYSYYYSSHG
PRYNQDRKFTHCERDYSKSSHVYSSPYKYDHYKSRWTHDQERKRRCQSPEGSKTPPEKRH
RKLSQSESLEEQRGRKHKKSKKKKKLKSKHRERDSRYHQDSDPSVSSSEAETHKHKHKKK
KKKKKKRTKKEERAETSASRLPKPTGLETKNLKAWEMTESSSDAYRKQGKGPQDGETVCQ
KTKSLEGSKRESCCPPTDHNIQSVCWKPSLHSSQYIYKPKSD
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaagacgtctgagtcctcaaagccttcggcttctgagaaacagcct
ttcagctccgtggcaccagcttctggagaaatggactcgggctctgcaggatggggtgct
gtgtcttcttctttagaagctccaaaacacaaaatatctttggggccagtgccaggagct
gcagtgtactctaattcatcagtacctgaaaaatccaagccctcagctcagaaggatctg
tccgctgttggtgacggcattactgccccgcagaaggtcctctttccggcagagaagata
tgcttgaaatggcaaaaaacacacagagttggagccggtctccaaaaccttggcaacaca
tgcttcctcaactctgcactgcaatgtctgacctacaccccacctcttgccaactacatg
ctttcccatgaacactccaaaacctgtcacgaacaaggattttgcatgatgtgcaccatg
caaggtcacatcacccaggcgctttcaaactccggcaatgtcatcaagcctatgcctgtc
ataaatgatcttagacgaatagcaaagcatttccgttttggcaatcaggaagatgcacac
gaatttctacggtacaccgttgatgctatgcagaaagcatgtctgaatggtagcaacaaa
ttggacagacatacccaagctaccacattcattcatcaaatatttggaggatacctaaga
tctagagtaaaatgtatgaactgcaaaggagtttcagatacttttgatccatacctagat
attacattggagataaagtcagctcaaagtgttaacaaagctctggagcagtttgtcaag
ccagaacagctggatggtgaaaatgcctataaatgtagcaagtgtaaaaaaatggttcct
gcgtcaaagaggtttacaatacatcgggcttcaaacgtactcaccttgtccttgaaacgg
ttcgcaaatttcagtggtggcaaaattacaaaggaggtgaaataccctgagtatttggat
attcggccatatatgtcccagccaaatggagagccaattatttatgcattgtatgcagtt
ttggtacatactggtttcagctgtcatgcaggacattactactgctatataaaggccagt
aacgggcagtggtaccagatgaatgactccaccgtctcaaacagtgacatcaggactgta
ttgaatcagcaagcctacgtgcttttttatatcaggtcccatgacatgaaaaatggcggc
gaacacattcattccgttcacactcctgggcagtcttctcctcgacctgttatcaatcag
cgggtggtcaataagcagactgcgccagggtttattggaccacaactaccccctcacatg
attaagaattcaaatcatttgaatggaacagcatccctgaaagaaactcccagcggttct
gtggcaatcgctagtaacgtcaccctcaccaggccttcgtctgctcctccggccatgtct
atcccaaactggacgatgaacaggcctaccaccgccgccactccagacccttccaagaag
caaaaaataaccatcagtattcacaacaagctgtccgctcgccaaagtgtctctcacgcc
agctgtaccttggacaaccccagcaagcctgccccgtcctcaaccatttccagccctgct
gctgtgcaatctacctcaagcgcacctgccgtctcggctcctaaccaagtccccaagcaa
atgcctccgagcgaaccttgctccaagttggtagtgaatggcaagtccaagctgaacccg
agcacgttggtcccttacggggcagaatcttctgaagactccgacgaggagtccaaagga
ctggtgaaagagaacggccacgctgcccctctcaacggcattctagctgaaaatgcagcc
agcgcattggagggctcttgtttgtcgtgtcacaacgccgagaaggaggctccgcagcac
gaagcgccgaaaaacattaccgttcttgtttccattagcataaatgatacccctaaacaa
aacggacagatatgcaacgattccactagccaagcaaagcctgctaaatcagccgaaaac
ccgttctccaaagcaaatgggttgcctgggaaaggtgtgcctacagctttgcccccagtc
cctgaagacaggatcttagactctttcagatacaatcaactgaaaacctcatcgggggaa
ataagcggtagtggaacagaaaaaacagacggcccttctgaagagggagccagtactctt
cccaacaacatccagactcatttggccccttcagaccctgaaatcacctctacgacagaa
gacccctgtgaaaggactgttgccaaaacagagagcacgcctcttgagagtgatgggcag
cacgaccctaaatccagttcgttgggggcagaagaagacttccctagggaaggtgacgtg
gaggaccatcctgaacagatgaggggaccaaaagaagggaaagcagtttgggaaaagagc
cctgagcctgtcaggggagcagcagaaaagggggtgcctagccccctctttacaaggtcc
gacggtgaatgtagttctccaaagcttgccactgtaaacgtggcagaaaaatcccaagaa
acacaagacagtgcggaacgctacgaggatgtcccgcctcctggtgaaccttccgttaca
aggctggaccccgttggaggaagccagtgttcgaaggacgacggcagattgggagagagc
agcagcaaacagttcataggaaatacagaaaggcaagagttgaaatcccattcgcccctt
aaggaaaaaatatccacctcaaaaaaaatagacaaagagcactaccgttccaaaaggaag
cgctctgaaagcgaggaggaggaggaagaggaggcagcagtggccccccggggccagcca
gaagggcactaccccaagaagtggtgctcctacagcagggagagagccaagcaggagcac
taccggcgagaatactacaatgcaaactattacagattcccatgcagccctgatcctgag
aggggcatggggaaatatccctcttacagatctcgcagcagaggtaaaacggaccctgaa
cggagcaggcattgctacgggaaaggggagcagtcgtggagcaaggagcggtattaccaa
gatggcccgaggagatgggagagctgcaggccttacagctactactattcttcccacggc
cccaggtacaatcaggataggaaattcactcactgcgagagagactatagcaaatcaagt
catgtttacagtagcccgtataaatacgatcattataaaagcaggtggactcacgaccag
gaaaggaagaggaggtgccagagccccgaggggagcaagacccccccggaaaagaggcac
cggaagctctcacagagtgagtctctcgaggaacaaagagggcggaagcataagaagtca
aagaagaagaagaagttgaaaagcaaacacagagagagagattccaggtaccaccaggat
tcagacccgtctgtatccagctccgaggccgagactcacaagcataaacataagaagaaa
aagaagaagaagaagaaacgcacaaagaaagaagagcgcgccgaaacgtcagcttctcgt
cttcccaagccgaccggtttggaaaccaagaatctcaaagcatgggaaatgactgagtct
tcttcggatgcatataggaaacagggcaagggcccccaggatggagagactgtttgccag
aaaaccaagagcttagaaggtagcaagagagagagctgctgcccacctacagatcataac
atccagagtgtctgctggaagccatccctccacagctcgcagtatatttataaaccgaaa
agcgattaa
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integrated database retrieval system
