KEGG   Podarcis raffonei (Aeolian wall lizard): 128401539
Entry
128401539         CDS       T09310                                 
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
praf  Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:praf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:praf03037]
    128401539 (IFT140)
Cilium and associated proteins [BR:praf03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   128401539 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_EML_2 WD40_Prp19 ANAPC4_WD40 Beta-prop_RIG_2nd TPR_IFT80_172 Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR55 TPR_GEMI5 Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Consortin_N TPR_COPA_B WD40_MABP1-WDR62_1st Clathrin
Other DBs
NCBI-GeneID: 128401539
NCBI-ProteinID: XP_053220681
LinkDB
Position
14:complement(37205026..37288368)
AA seq 1454 aa
MAVYVDHRIEALESRGRHSHIAWHPQQPFLAVASINLNSGGCVDIFLEQGEYVRDAHLER
SFQATCLSWHPTKLILAVGCEMGDVVVVNKQDKEHHAVPSNHNADITILNWSTNGTRLVS
GDKLGVLVLWRMDQRGRVQGPPLLKHEYGKHLNYCIFRPPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSGMGMPLKMGPQEGLSFFISVTDGTVHYVNERGKTSQALTTESSVQKLLFME
KDILVVITETLLLSLHKISLEGEAEEVLKVKLSGRMGHSADIILIDRSLLIAATGETVLR
FWDLEKGENYVLDLDEQLGFEIGECLNCVSFCNAKGLLSAGTDRGKIAMWRKVASPSQST
CSQEAKDSWKLQAPTELEGNIIQIQWGSKKNLLAVNTGNSVAIFNEQAMLSHFHQQVAVV
QISPNLFNITSFSTGITDNLRIDMHVNGVCCTKDAVAFWNGKQVAIFELSAATARNSGSF
PCDSPVLAMHEENLYTVEPNRVQVRTWQGTVKQLLVFSESEGNPCLLSVCGNFLTVGTDL
AHFKIFDLSRREAKAHSSSKALGDLVPGASGIASVKCNASGNKVSILINKADGSLDSKIC
FYDIEMDTVTLFDFQSVQQKDAREMISIGQEAEGRNTSEYPELSDRIPTSHFWDQSEPRL
FVCETDRNPSQQSLDKNQQSEENSVDVLIVSFFSTEEHGLLLHDHFPLPSAYRSLLGMEV
PHYYFAKKPEADKDEAEPSGVTLYQMVARRPLRDFIGLEECDKATCDAMLNFSFYLTIGD
MDEAFKSIKLIKSESVWENMARMCVKTQRLDVARVCLGNMGHARGAKALREAEQEPELEA
RVAMLAIQLGMLEDAEQLYKQCKRYDLLNKFYQASDQWDKAIEVAEVHDRVHLRTTYYSY
AKHLEAIAERDLALTYYEKSETHKFEVPRMLSEDLQALESYVNKMKDKGLWKWWAQYLEG
QADMDAALKYYELAQDYFSMVRIHCFLGNTQKAAEIANATGNWAASYHVARHYESNDDIS
QAVHFYTRAQAFNNAIRLCKENNLDDQLMNLALLSSPEDMIEAARYYEGKGEQMDRAVML
YHKAGHLSKALELAFATEQFGALQLIADDLDEKSDPALLARCSDFFIEHAQYEKAVELLL
AAKKYHDALQLCLTQNLTITEEMAEKMTISKDSKEVPEDLRRELLEQIADCCMRQGNYHM
ATKKYTQSGNKLKAMRALLKSGDTEKIVFFAGVSRQREIYIMAANYLQSLDWRKDPEIMK
NIISFYTKGRALDLLAGFYDACAQVEVDEYQNYEKALGALTEAYKCLSKAKTRSPVEQES
KLALLHSKMALVKRFIQARRLYSDDPKEAVRQCELLLGEPDIDSAIRLGDVLGFLVEHHL
QVQEFQMAYRYLEELRKKIPCVNLHYYVSQQTVEAVHRGLGIPLSRNTAPERVRHNSMEE
KGVEDEVADEAEAS
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggctgtgtacgttgatcatcgtatagaagctctcgagtcccgtggacgccattctcac
atagcttggcaccctcagcagccatttttggctgtcgcatctattaatttaaactctggt
ggctgtgtggatatttttctagaacagggagagtatgtgcgtgatgcacatttggaaaga
agcttccaggccacatgcctcagttggcatccaaccaaactgatactggcagtgggctgt
gagatgggcgacgtggtggtggtgaacaagcaggacaaggaacatcatgcggtaccctcc
aaccataatgctgatattacaattctaaactggagtactaatggcacccgactagtttct
ggcgacaaacttggtgtccttgtgttatggaggatggaccagcggggtagagttcagggc
ccccctctgcttaagcatgaatatggaaagcatctcaattactgcatcttccgaccaccc
cctcctggcgaggacctggtacagctagcaaaagctgcagtcagtggagatgagaaggcc
ctggacatgtttaactggagaaaatctgggatgggcatgcctctgaaaatgggaccgcaa
gaagggctgtccttcttcatcagtgtgacagatggaactgtgcattatgtgaacgagagg
gggaaaacgagccaggcattgaccacagagagttcagtccaaaagctacttttcatggaa
aaagatatattggtagtaataacggagactctcctcttatctcttcacaaaatttccctt
gaaggagaagcagaggaggtcttgaaggtgaagctgagtggaagaatgggtcattccgca
gatatcattttgattgaccgtagccttcttatagcagcaacaggtgaaacagttcttagg
ttctgggacttggagaaaggtgagaactatgtgctggatctggatgagcagcttgggttt
gaaataggagagtgcctcaactgtgtttccttttgcaatgctaaaggtctcctatcagct
ggcaccgacagagggaagatagctatgtggaggaaagtggcatccccttcccaaagcact
tgctcacaggaagccaaggacagctggaagcttcaagcacctactgagcttgaggggaat
ataattcaaatacagtggggatccaaaaaaaatttgttggctgtaaacacaggcaactct
gtagcaatctttaatgaacaggcaatgttgtcacactttcaccagcaagtggcagtggtg
caaatttcgccaaacctattcaacattacctccttcagcacaggaattactgacaacctt
cgcattgacatgcacgtgaatggagtgtgttgtactaaggatgctgtagcattctggaat
ggaaagcaagttgctatctttgaactctcagctgccactgcacgaaattcaggttctttc
ccttgtgattcccccgtgctggctatgcatgaagaaaatctttacacagttgagccaaat
cgtgttcaagttcgcacgtggcagggcactgtaaagcagctgctggtgttctctgaatct
gaagggaatccatgcctcctgagtgtctgtggaaatttcttgactgtgggaacagacctg
gctcacttcaaaatctttgatctttctcgcagggaggcaaaagcacactcgagtagcaag
gccctgggtgatctggttccaggcgctagtgggattgcatctgtaaagtgtaacgcaagt
ggcaacaaagttagcatcctcatcaacaaggctgatgggagtcttgactccaagatctgt
ttttatgacattgaaatggacacagtcactctgtttgatttccaatctgtgcaacagaag
gatgccagggagatgatctccattggacaggaggctgaagggagaaacacctctgaatat
ccagagctgagtgatcgtattcctactagtcacttttgggatcaaagcgaaccaaggctt
tttgtgtgtgaaacagatcggaacccaagtcagcagtccctggacaagaatcagcaatca
gaagaaaactcagtggatgttttgatcgtatccttcttcagtactgaagagcatgggctt
ttgctccatgatcactttccattgccatcagcctaccggtctcttttgggcatggaggtg
ccacattattattttgccaaaaagcctgaagctgataaagatgaggcagagcctagtggg
gtaacactctatcaaatggtagccagaaggccattgcgcgacttcattgggttggaagag
tgtgacaaggccacatgtgatgctatgcttaacttcagcttctatctcaccattggggat
atggatgaggccttcaaatccatcaagctcatcaaaagtgaatccgtctgggagaacatg
gcccgcatgtgtgtgaagacacaaaggctggatgttgccagagtttgcctggggaatatg
ggccatgctagaggagccaaggcactgcgggaggctgagcaagagccagagctggaagcc
agggtagccatgttggcaattcagctgggtatgctggaagatgctgagcaactgtataag
cagtgcaagcgctatgaccttttgaacaagttctaccaggcctcagatcagtgggacaaa
gccatagaagtagccgaggttcacgaccgtgtccacctgcgcaccacctactacagttac
gcaaagcacctggaagccatagctgagcgcgatcttgcactgacctactatgagaagtca
gagacacacaagtttgaggttcctcgaatgctttcagaagatctacaggccttggagtct
tacgtcaacaagatgaaagataaaggcttgtggaagtggtgggcccagtatctggaaggt
caggcagacatggatgcggctttaaaatactacgaactggctcaggattatttttccatg
gtccgtattcactgtttcctgggtaacacccagaaggcagcggaaatagcaaatgcaaca
gggaactgggcagcttcatatcacgtcgcccgtcattatgagagcaatgatgacatcagc
caggctgtgcacttctacaccagagcgcaagcatttaacaacgctattcggttgtgcaag
gagaacaacctggatgaccagctgatgaacctggctctcctcagctcaccagaagacatg
atagaagcagcccgctattacgaagggaagggggagcaaatggacagggcagtgatgctg
tatcacaaggcaggacacttatccaaggctctggagctagcctttgccacagagcagttt
ggagccctgcagctcattgctgacgacttggatgagaagtcggacccagccctgctggct
cgttgctctgacttcttcattgaacatgcccagtatgagaaggcagttgaactcttgcta
gctgccaaaaagtaccacgatgctctccagctttgtctgacacagaatctgaccatcacc
gaggagatggctgagaagatgaccatttcaaaggactccaaagaggtcccagaggacttg
cgacgggaacttctggagcaaattgccgattgctgcatgcggcagggcaattaccacatg
gccactaagaagtacacgcagtcagggaacaagctgaaggcaatgagagccctgctcaaa
tcgggagacacagagaagattgtgttctttgctggtgtctccagacagagagagatttac
atcatggctgccaactatctccagtccctggactggcgcaaggacccggagattatgaag
aacatcatcagcttttacaccaaagggagggctcttgacctcttagctggtttctacgat
gcttgtgctcaggtggaggtggatgagtaccagaactatgagaaggcactgggagcccta
accgaggcgtacaaatgcttgtcaaaggcaaagacacgcagccccgttgagcaggagagc
aaacttgcactcctccacagcaagatggccctggtgaagagattcattcaggcccggagg
ctttattcagacgatcccaaggaggcagtaaggcagtgtgagctcctcctgggtgagcca
gacattgacagtgccatccgcctgggagatgttctcggcttcctggtagaacaccaccta
caggtccaagaattccagatggcctaccggtacctagaagagttgcggaaaaagattccc
tgcgtcaacctccattactacgtgagccaacagactgtggaggcagtccacaggggactg
ggcattcctctgagccgaaacactgccccagagagggttcgtcacaacagcatggaggag
aaaggggtggaagacgaagtggctgatgaagcagaggcttcctaa

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