Podarcis raffonei (Aeolian wall lizard): 128401589
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Entry
128401589 CDS
T09310
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B isoform X1
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128401589 (MEX3B)
04121 Ubiquitin system [BR:
praf04121
]
128401589 (MEX3B)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128401589 (MEX3B)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128401589 (MEX3B)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128401589 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128401589
NCBI-ProteinID:
XP_053220794
LinkDB
All DBs
Position
14:15979683..15985867
Genome browser
AA seq
611 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSLYDNEPR
KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKEDV
AMARREIISAAEHFSMIRASRNKNTVLNGTVPSPPNLPGQTTIQVRVPYRVVGLVVGPKG
ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDDND
FHANGTDVGFELAAGGAGSLWSKPTPPPPPPPPPPPPPPPPPSSSSITPTPGRKPFCSYR
NDSSSSLGSASTDSYFGNGVGGSGGSSARLADYSPPSPSLSFPHHNGNNNNNGYGVYGGG
EVLSSPDCCASELPPFDSPPGFDLAPAPPPGAPLLWSQFERGPSSPGAVAFPAGGGGAPP
SNANLALLVSSGGQRRSAGPPPPPPPPPPTRLSPPLHVGAGGVALEQHPLARRVRSDPGG
RLIAAAVAAAAAAAAAAAAASSPSAPSSSPCSYPLYANGLGCHLPGLPSDSSASSSSSSS
SSSSSSCSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKTEPQCPVCH
SAVTQAIRIFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctccttgtttgccgacatggagaggaacgggagcggaggaggcggcggtggt
ggaggaggaggcggggagaccctggatgaccaaagagcccttcagatcgctttggatcag
ctctctctgctgggcttggacaacgacgagacgggctccctttacgacaacgagccgcgc
aagaagagcgtgaacatgaccgaatgcgtcccggtgcccagctcagagcatgtcgccgag
atcgtgggcaggcaaggttgtaaaatcaaagcgttgcgggccaaaaccaacacctacatc
aagaccccggtccgcggggaggaaccgctcttcgttgtcacgggcaggaaggaagatgtg
gccatggcccggagggagatcatttcggcggcggaacacttctccatgatccgcgcctcc
cggaacaaaaacaccgtgctcaacggcacggtgcccagcccgcccaacctgccgggccaa
accaccatccaagtgcgggtcccttaccgggtggtgggcctcgtggtggggcccaagggt
gccaccatcaagcgcatccagcagcaaacgcacacctacatcgtgacgcccagccgcgac
aaagagcccgtcttcgaggtgaccggcatgccggagaacgtggaccgcgcgcgggaggag
atcgaggcgcacatcgccatgcgcacgggcggcatcatcgagctcaccgacgacaacgac
ttccacgccaacggcaccgacgtgggcttcgagctagccgccggcggcgccgggagcctc
tggagcaagcccacgccgccccctccgccgccgccccctcctcctccgcctcccccgccg
ccgccctcctcttccagcatcaccccgacgccgggccgcaagcccttctgcagctaccgc
aacgacagctccagctcgctgggcagcgcttccaccgactcgtacttcggcaatggcgtc
ggaggaagcggcggcagcagcgcccgcttggccgactacagcccgcccagcccgtcgctc
agcttcccgcaccacaacggcaacaacaacaacaacggctacggcgtctatggcggcggc
gaggtgctctcctcgcccgactgctgcgcctccgagctgccgcccttcgattccccgccc
ggcttcgacttggcgccggcgcctccgcccggcgcgccgctgctctggtcgcagttcgag
cgcgggccctcgtcgcccggagccgtcgcgtttcccgccggcggcggcggcgcgcctccg
tcgaacgccaacctggccttgctggtgagcagcggagggcagaggcggagcgccgggccg
cctccgcccccaccgcctcctccccccacgcgcctttccccgcctctgcacgtcggggcg
ggaggcgtggcgctggagcagcacccgctggcgcggcgggtgcgcagcgacccgggcggc
cgcctgatcgccgccgccgtggccgccgctgctgctgccgccgcggccgctgcagccgct
tcctcgccgtccgccccgtcgtcgtcgccctgctcctaccctctatacgccaacgggctg
ggctgccacttgccgggcctgccgtcggattcgtcggcgtcgtcgtcctcgtcgtccagc
tcctcttccagctcgtcgtgctcgtcgtcggggctgcggaggaaaggcagccgcgactgc
tccgtgtgcttcgagagcgaggtgatcgcggcgctggtgccctgcggccacaacctcttc
tgcatggagtgtgccaaccgcatctgcgagaagacggagcctcagtgccccgtgtgccac
agcgccgtcactcaggccatccggatcttttcctaa
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