Podarcis raffonei (Aeolian wall lizard): 128401670
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Entry
128401670 CDS
T09310
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
praf00535
]
128401670 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
praf00536
]
128401670 (ACAN)
04091 Lectins [BR:
praf04091
]
128401670 (ACAN)
Proteoglycans [BR:
praf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
128401670 (ACAN)
Glycosaminoglycan binding proteins [BR:
praf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
128401670 (ACAN)
Lectins [BR:
praf04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
128401670 (ACAN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
Sushi
V-set
hEGF
EGF_CA
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
128401670
NCBI-ProteinID:
XP_053220972
LinkDB
All DBs
Position
14:complement(18119964..18205355)
Genome browser
AA seq
1897 aa
AA seq
DB search
MTTFLLAFVCLRIITAAVAVEVLDHGATLSVSIPLRSPLRIPLGNTLTIPCYYINTLEHV
TTSPFTPPLTPRIKWSKLSGGKEVVLLVAMDGHVRINTAYQEVVSLPNYPAIPTDATLEI
KALRSNDTGIYRCEVIHGIEDSQDTVEVKVKGIVFHYRAISTRYTLDFEKAKQACIQNSA
VIATPEQLQAAYDDGFDQCDAGWLADQTVRYPMHHPREGCYGDKDEFPGVRTYGVRETDE
TYDVYCYAEEMEGKVFYATSPEKFSFPEAAEKCHRLGARLATTGELYLAWKDGMDVCSAG
WLADRSVRYPINKARPTCGGGLVGVRTVYLHVNQTGYPHPHSRYDAICYAGRDLDTIIHE
NFTSEIIDELGSGFTIQTVTETDVELEFARNATEEEARGSIATLEPIDFTASEVDEGFTA
TPDLFVTSFVEEAENRTDVGIWEGLENATFSLLDALPTTDTLEVSSVEDSLWATVTPGLE
STLPFTGEDQIVPGTAAPDIGLIPGQPISPTGVIFHYRPSTNRYSLTFVKAQQACLDNNA
VIATPEQLQAAYENGYDQCDAGWLRDQTVRYPIVVPRSKCEGDKDDIPGVRTYGMRPASE
MFDVYCYIDRLNGEVFFATQPDQFTLQEAQEYCQSQNATLASTGQLYAAWKLGLDNCRAG
WLADGSLRYPIVHPRPACGGEKPGVRTTYLYPNQTGFPDPQSKHHAFCFRAQPSQYEGIE
EELIAAQLVPGVEEVPSGEETTVEMEFATDSENQTEWGTEVFPTNISLLSVIPSAVAPID
AIPSETSVEAPITQTSASGWTSGAPDTSGMYEPSGEPSGFGESGFPSGTTDFSGLPSGES
GLPSGDISGLSSGDIEVSILPSGDEELTSGIGSGIQERVPGLQEGKGVPEISGLPSGFSG
DGSGVDFFSGLPSGEYDYSGLPSGFPTVSLVNATLVEVVTTATDKEVEGKGTIGVSGDGD
LSGLPSPGWDMSGITSGLPSGFDVSGIPDISGFSSGLDISGELPRIPDFSGLPSGLDASG
QPSGLPDISGLSSGIDFSGENFGIPDISGFVDLSGQASGTDGSGEPSGVTFIDANLFEVT
TPSAKEEEGKGFVEMSGLSSGDEDLSGTVSGMLDVSGQPSGQIDFSGWTSGSHEISGLPS
GLTDISGESSGVGLTSGLSSGIYDYSGLTSGFPTVSLVDTTLVEVVTQPSVAQEFGEGTS
GVLEISGFPSGDREASGEPYDVTTVSGYPSGTTDISGTSSGVPYFSGEIAGVTDLSGESS
TVAGTSGDASGIPEITLVTSDLIEAVTSPAVSQEMAGGTEATHPHFSESSGETSTTAGET
SAYHESTISPPEYHDISGETSTFHEASVETSTIHETSGEISTFHEPGVESSTVHETSGEI
STFHEPGVESSTVHETSGEISTFHEPGVESSTVHETSGEISTFHEAGVESSTVHETSGEI
SRFHEAGVETSTIHETSGEASALPDSHPEMPTLYETGSETSPLPESHTETSGVLYFSGLP
SEALEERSQIHGDSSGPPPDPASDIPEKALLPDSLPGTSEPDAHSKHLEEGQVETEAYTH
KIPGSETEGAAFPEVPPTPPTATDVLPEVSPEVTDETESTTQVMPKTCEEKPCGAGTCQE
QDGSVTCVCPPGYMGDRCDIDIDECHSSPCLNGATCVDGIHTFKCLCLPSYGGDLCDVDL
AECEAGWTKFQGNCYKHFEEKHTWVDAENLCRDHQSHLSSIITPEEQEFVNNNAQDYQWI
GLSDRAVEDDFRWSDGHSLQYENWRPNQPDNFFAKGEDCVVMIWHEKGEWNDVPCNYHLP
FTCKKGTVSCGDPPVVENARHFGKKKDRYEINSMVRYQCNQGYIQRHLPTIRCQPNGHWE
EPRIACIDPSTYKHRLHKRSARTRSRTNGGMAKRPTH
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttttctactagcctttgtgtgtttgcgaatcatcactgcagctgtcgctgtg
gaagttttagatcatggtgccacactgagtgtgagcatacctttacgctcccccctgcgc
attcccctgggaaacaccctgaccatcccctgctactacatcaacacattggaacacgtc
accacatctccgttcaccccgcctctgactccacggatcaaatggagcaagctgtcgggc
ggcaaagaggttgtcttgctggtggccatggatgggcacgtgagaatcaacactgcatac
caggaggtggtctctttgcccaattacccagccatacccactgatgccacgctggaaatc
aaggcacttcgctccaatgataccgggatctatcgctgcgaggtgatacatggcattgag
gatagccaggacaccgtagaggtgaaggtaaaaggcatcgtgttccattacagagccatc
tccacccggtacactttggactttgagaaggccaagcaggcctgcatccagaacagtgct
gtcattgcaactccagaacagctccaggctgcctatgacgatggctttgaccagtgtgat
gctggatggttggctgatcagacggtcaggtacccaatgcaccatccccgggaaggttgt
tatggtgacaaggatgagtttcctggagtgagaacatacggtgttcgtgagacggatgag
acgtacgatgtgtattgttatgcagaagaaatggaagggaaagtcttctacgccacctcc
ccggagaaattcagcttcccagaagctgcagagaaatgccaccgccttggcgctcgtttg
gcaacgacgggagaactgtacttggcctggaaggatgggatggatgtctgcagcgctggc
tggctggcagaccgcagcgtccggtatcccatcaacaaggcacgccccacttgtggtggt
ggcctggtcggagtgcgcaccgtgtacctccacgtcaaccagacagggtatcctcacccc
cattcccgctatgatgccatctgctacgctggtcgcgacttggacacaatcatccatgag
aacttcaccagcgagataattgatgaactgggcagtggcttcaccatccagacagtcact
gagacagatgttgagctggaattcgcacgcaacgccaccgaggaggaggcccgaggcagc
attgccaccttggagccaatagactttaccgcctcggaggtggacgaaggcttcacagca
acaccagatctctttgttactagcttcgttgaagaggcagagaacaggacagatgtgggg
atctgggagggtctagaaaacgccaccttctcgctcctagatgctcttcccaccactgat
accctggaggtgagctcggtggaagacagcttgtgggctaccgtcacgccaggactagaa
tccaccttgccatttactggggaagatcaaattgtgccgggaacagctgctcctgatatt
ggcctcattcctgggcaacccatttctcccacaggtgtcatctttcattaccggccatcc
accaacaggtattccctgacttttgtcaaagctcagcaagcttgcctggataacaatgct
gtgattgccactcctgaacagctgcaggcagcctatgagaatggttacgaccagtgtgat
gctggctggctgagagaccagacggtcaggtaccctattgtggttccgcggagcaaatgt
gaaggagacaaagacgacatcccaggtgtacggacatatggcatgcgcccagcatccgag
atgtttgatgtctactgctatattgacagactgaatggtgaggtcttcttcgcaacacaa
ccagaccagttcaccttacaggaagctcaagaatactgtcagagccagaatgctacactg
gcttcaactggtcaactctatgcagcctggaagctgggtctggataactgccgggctggc
tggctggctgatggcagccttcgatatcccattgttcacccacgtcctgcatgtggtggg
gagaagcctggtgtgaggaccacctacctgtaccccaatcagacgggattccctgatcct
cagtcaaagcaccacgctttttgtttcagagctcaaccatctcagtatgagggcatagag
gaagagctcattgcagcccagctagttcctggggtcgaggaagtcccttctggggaggaa
acaactgtggaaatggagtttgccactgattctgaaaatcagaccgagtggggaacagaa
gtatttccaacaaacatatcattgttgtctgtgattccatcagctgttgctcctattgat
gccatacctagtgagacaagtgtagaagctccaatcacacaaacatctgcttctgggtgg
acatctggagctccagatacaagtggaatgtatgaacctagtggagaaccctctggattt
ggagaaagcgggtttccttctggaaccacagatttcagcggactcccttctggtgagagt
ggcctaccatcaggagacataagtggtctgtcttccggtgatattgaagtcagcatttta
ccttctggagatgaagaactgacatcagggattggctcaggaatccaagagcgagtacct
ggacttcaagaaggcaaaggggttccagaaatcagtgggttgccttctggattcagtgga
gatggttctggtgtggactttttcagtggcttaccatctggagagtatgattacagtggt
ctcccatctggatttcctaccgtgtcccttgtcaatgccacattggtggaagttgtcacc
acagcaacggacaaggaagttgaagggaaaggaacaattggtgtcagtggagatggagac
ttatcagggttgccctctcctggatgggacatgagtggcataaccagtgggttaccctca
ggatttgatgtcagtggaatacctgacatcagtgggttttcctcaggacttgatatcagt
ggggagctgcctaggatacctgatttcagtggattaccatccggacttgacgctagcgga
caaccatctggcctaccagatattagtgggttgtcctcaggaattgacttcagtggggaa
aattttgggatacctgatataagtggcttcgtggacttaagtggccaagcttccggtact
gatggaagtggcgagccttcaggggttaccttcatagatgccaatttgtttgaggtgaca
actccttcagctaaagaagaagaaggcaaaggatttgtagaaatgagtgggttgtcttca
ggagatgaagatctatcaggcacagtgtctggaatgttagatgtgagtggtcagccttct
ggccaaatagacttcagtgggtggacttcaggatctcatgaaattagtggacttccaagt
ggactaacagacattagtggtgaaagttctggtgttggtctcaccagtggcttgtcatct
ggaatttatgattacagtgggctcacgtctgggtttcccacggtctcccttgtggataca
actttggtggaagttgtaacacagccatcagttgcccaggaatttggagaagggacatct
ggggtattagaaatcagtggatttccttcaggagatagggaggcatctggagaaccatac
gatgtgacaacagttagcggctatccatcaggaacaactgacatcagtggaacatcatcg
ggtgttccttatttcagtggagaaattgctggtgtcactgacctaagtggagagtcttca
actgtagctggtactagtggtgatgcctctggaatcccagaaatcaccttagtaacttct
gatcttatagaagctgtgacaagccctgcagtttcacaggaaatggctggaggaacagag
gcaacgcatccccatttttctgaatcaagtggagaaacctccacgacagctggagagact
tctgcatatcacgaaagtaccataagcccacctgaatatcatgatattagtggtgaaacg
tccacatttcatgaagccagtgtagaaacctctactattcatgaaaccagtggtgagata
tccacatttcatgaacctggtgtagaatcctcaactgttcatgaaaccagtggtgagata
tccacatttcatgaacctggtgtagaatcctcaactgttcatgaaaccagtggtgagata
tccacgtttcatgaacctggtgtagaatcctcaactgttcatgaaaccagtggtgagata
tccacgtttcatgaagctggtgtagaatcctcaactgttcatgaaaccagtggtgagata
tccaggtttcatgaagctggtgtagaaacttccaccattcatgaaacaagtggtgaagca
tcagcattaccagacagccaccctgaaatgccaaccctttatgaaacgggtagtgaaaca
tcaccattgcctgaaagccatacagaaacatctggagtactttatttcagcggattgccc
tctgaggcacttgaagaaagaagccagattcatggggatagttctgggccaccccctgac
cctgcttctgacattccagagaaagctctgctgccagatagtctaccaggaaccagtgaa
ccagatgcgcactccaagcatctagaagaaggccaggttgaaacagaggcctatacacac
aaaataccaggttcggaaacagaaggtgcagcttttccagaggttccaccaacacctccg
actgctactgatgtcctgcctgaagtttcaccagaggttacagatgagacggaatctact
acacaagttatgcccaagacatgtgaagagaaaccatgtggtgctggaacctgccaagaa
caagatggaagcgtcacttgcgtgtgcccacctggatatatgggtgatcgctgtgacata
gacattgatgagtgccactccagcccctgtctgaatggagctacctgcgtcgatggcatc
cacactttcaaatgcttatgccttcccagctacggaggggacctctgtgacgttgatctg
gcagaatgtgaagcaggctggaccaaattccaaggcaactgttacaagcactttgaagaa
aagcacacgtgggtggatgctgagaacctctgccgagaccatcagtctcacctgagcagt
atcatcactcccgaagagcaggagtttgtgaacaacaatgctcaagactaccagtggatt
ggccttagtgacagagcggttgaggatgacttccgctggtctgatggacactcccttcaa
tatgagaactggcggcccaaccaacccgataatttctttgccaaaggagaagattgtgtc
gtaatgatctggcatgagaagggagagtggaacgacgtcccctgcaactaccatctccca
ttcacgtgcaagaaaggaacagtttcctgtggagacccacccgtggttgagaacgccagg
cactttggaaagaagaaagaccgctatgagatcaactccatggtgcggtaccagtgcaat
cagggctacattcagcgccatctgcccaccatccggtgtcaacccaatgggcactgggaa
gagccacggatagcctgtattgatccctccacctacaagcacagactacataagaggagc
gcaaggactcgatcaaggaccaatggaggaatggcgaagagacccacccattaa
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integrated database retrieval system
