Podarcis raffonei (Aeolian wall lizard): 128401834
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Entry
128401834 CDS
T09310
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128401834 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
praf03310
]
128401834 (RORA)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128401834 (RORA)
Nuclear receptors [BR:
praf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128401834 (RORA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
128401834
NCBI-ProteinID:
XP_053221328
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Position
14:complement(3979612..4052938)
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AA seq
468 aa
AA seq
DB search
MLCLVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQSKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLLSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFRAIYPDIVRLHFPPLYKELFTSEFEPAMQMDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcttggtgatcgccgcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacctgtgagggctgtaagggc
tttttcaggaggagtcagcaaagtaacgccacctattcctgtccccgacagaagaactgt
ttaattgatcgaaccagtagaaaccgttgccaacactgtcgtttacagaaatgccttgct
gtggggatgtctcgagatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagc
ttgtatgcagaagtgcagaaacaccggatgcagcaacagcagcgagatcaccaacagcaa
cccggcgaagcagagccattgacgccaacatacaatatcactaccaatgggctcacagaa
ctgcatgatgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgccgttagcagcttctacttagacatacagccttctccagatcagtcggggcttgat
attaatggaatcaaaccagaaccgatatgtgactacacacctgcatcgggcttctttcca
tattgctcttttacaaatggagagacttctcctactgtgtccatggcagaattagaacat
ctcgcacagaacatttccaaatcacacatggaaacttgccagtacttgagggaggagttg
cagcaaataacatggcaaacttttctacaggaagaaattgagaactaccagagcaagcaa
agggaagtaatgtggcaattgtgtgccgtgaaaataacagaagcaatacagtacgtggtg
gagtttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtatttatcagaatgtgccgtgcctttgactcccag
aacaacacagtgtacttcgatggcaaatatgctagccctgatgtattcaagtcattagga
tgtgaagatttcattagttttgtttttgaatttggaaagagcttatgttctatgcacctt
actgaagatgagattgcattattttcagcttttgttttactctctgcagaccgatcatgg
cttcaggagaaagtaaaaatagaaaagctccaacagaagattcagttagcacttcaacat
gtattacagaagaaccaccgagaagatggaatcttaacaaagctaatatgcaaagtgtct
actttaagagcactgtgcgggcgacatacagaaaagcttatggcgtttagagcaatatac
ccagacattgtgcgacttcattttcctccattgtacaaggagttgttcacttcagaattt
gagccagcaatgcaaatggatgggtaa
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