Podarcis raffonei (Aeolian wall lizard): 128401884
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Entry
128401884 CDS
T09310
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128401884
04121 Ubiquitin system [BR:
praf04121
]
128401884
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128401884
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128401884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
128401884
NCBI-ProteinID:
XP_053221444
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All DBs
Position
14:30104218..30108489
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AA seq
682 aa
AA seq
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MDSNQRTSLGTSTHVSDLIGTGRELLPSELPTLRDVMRLYVTHHRRSLNCPEYHHLVAKP
KTKSAVWVHFGLPADESDRVVIDNIAICKICLNSVSAKGGNTSNLSSHLKFHHPLKFREL
TSPSRDISVDSCNEADDPPVATTVSAAEPAVTVAENPKKRLKTTLDVQPLSSKAPKSCTQ
AIIEYVATCMQSYDTVDHPKFIQMVNTLNPRYKLPSRKYFATKGVPKLYNDTVEKMKREV
SRIKDTELVITTDCWTSVAGTQFLAVTVHFISDEWKLTNAFLGCKHILKDHNSDNLCEML
TDTLSEWGIDVKNIFCSTTDNGTNIVKVVRQLGLEHVSCFAHNITVGVNRALNLTQLKKA
VTRLKNLQNSISHSWKMRRDFARSQEILQMEKVSLPSACPTIWWSTFKLCQTFLENKSAL
SEMFLGYPSKNHLMLEECDISAIQDFVSATTVLEDITTTLSGSNDITASSVLPLYRQIKK
SLQPDEGDSMLLQDIKHEILGALSEKYESAPMTTTLGLASLCDPRFRLRFLEAPEAVRQE
AIKKMADLNGSLCAASTEPSTPPPQPKKGLAKIFDLEEEEDDLAEDGLAPLSELKAEKEL
RSYMAMPRVDFDECPLMWWKAHEASFPMLKVLAKRFLAIPGTSVPCESVFSTAGSALQRQ
RASLLPENAEMQIFLAKNVNFV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaccagagaacaagtcttgggacatccactcacgtgagcgatctaattgga
actggcagagaattgttgccctctgaactcccaactctgcgagacgttatgagattatat
gtaactcatcatcgccgttctttgaattgtcctgaataccaccatttggtagccaagccc
aaaaccaaaagtgccgtttgggtgcattttggcttgcctgctgatgaaagtgaccgtgtg
gtgattgataatatcgccatttgtaagatatgtttgaattcggtatctgcgaaaggcgga
aacacctcaaatctaagtagccacctcaagtttcaccacccactgaaatttagggagttg
acttctccatcaagagacatttctgtcgattcgtgtaatgaagctgatgatcctccagtt
gcaacaacagttagtgctgctgagcctgcagtaacagttgcagaaaatcctaaaaaacgg
ctgaaaacaacattggatgttcaaccgctcagttcaaaggcaccgaaatcttgtactcag
gcaatcatagagtatgtggctacgtgcatgcagtcttacgacacagtggaccacccaaaa
tttatccagatggttaacactctaaacccaagatataagttgcccagcagaaaatacttt
gcaaccaaaggagttccaaaactgtacaatgacactgtggagaaaatgaagagagaagta
agccggataaaggatactgagctggtcatcactactgattgctggacatcagtagcaggc
actcaatttttggcagtgactgtacatttcatatcagatgagtggaagttgactaatgct
ttcttgggctgtaaacatattttgaaggaccacaactcagataatctttgtgaaatgctc
acagacacattatcggaatggggcatagatgtaaagaatatattttgcagtactactgat
aacggtacaaatattgtaaaagtagttaggcagcttggtttagagcacgtttcctgcttt
gcccacaatataactgttggggttaaccgagctttaaacttgacacagctgaaaaaggca
gttacaagactgaaaaacctgcagaatagcattagccatagttggaaaatgagaagagac
tttgccagatctcaagagatacttcagatggagaaagttagtttgccaagtgcttgtccc
acaatatggtggagcacatttaagctctgccaaacgtttcttgaaaacaaaagtgcatta
agtgagatgtttctgggttacccctccaaaaaccatttgatgttggaagagtgtgatatc
tctgctatacaagactttgtgtctgcaactactgtgttagaggacatcaccacgactcta
agtggaagcaatgatatcactgcttcatctgttctgccgctttatagacaaattaagaaa
agtcttcagcctgatgagggagacagtatgctgctgcaggatattaaacatgaaattttg
ggtgcactgtcagaaaagtatgaaagtgcacctatgacaaccactttaggtctagcttcg
ctgtgtgacccaaggtttcgcctgcggttcttggaggctcctgaggctgtcaggcaggag
gccataaagaagatggcagacttgaatgggagtctgtgtgctgcttctacggagcccagt
actccgcctcctcagccaaaaaaagggttggcgaaaatttttgatttagaggaggaagag
gatgacctggcagaagatggattagcaccgttgtctgaactgaaagcagaaaaagagcta
agaagctatatggctatgccaagagtggactttgatgaatgccctctgatgtggtggaag
gcacatgaggcatccttcccaatgttgaaggtgcttgcaaagaggtttctggctatccca
ggaacaagtgtgccgtgtgaaagtgttttcagcacagctggcagtgctcttcaaagacaa
agggcatctctgttgccagagaatgctgaaatgcagattttcctggccaaaaatgtaaat
tttgtttaa
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