Podarcis raffonei (Aeolian wall lizard): 128402053
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Entry
128402053 CDS
T09310
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04010
MAPK signaling pathway
praf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128402053 (CACNA1H)
04020 Calcium signaling pathway
128402053 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128402053 (CACNA1H)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128402053 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128402053
NCBI-ProteinID:
XP_053221794
LinkDB
All DBs
Position
14:46121078..46506927
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AA seq
2481 aa
AA seq
DB search
MTDGERREPFQPLTSDEVQVPIASGAATGKASQPGEEKDEDTLSACKSIQDSLASAGSST
RDPAHEGENQVPYPALASTVFFCLHQTTRPRSWCLKLVCNPWFEHVSMLVILLNCVTLGM
FQPCQDDKCKSERCTILEAFDHFIFAFFAVEMVIKMIALGIFGQKCYLGDTWNRLDFFIV
IAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLDTNFQMTYNLTFLNPYYRPEESEENPFICSSHRDNGM
QKCSSIPNRKEYKVECTLSMDSYNQNSYTLDFSSRNACINWNQYYNICRTGELNPHNGAI
NFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIA
TQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLY
NNWQSKRRKKVNPNGGDDGQGRRSKKRITSIHHLIHHHHHHHYHISNGSPHGPRSNPEIC
DLELKVMKPGSQLMLPPPSPNLRNSAAPDSESVHSIYHADCHVEGPPMKCKSSSVTAGVK
LSNHGNMNYPTILPSPVARAGVTPASVGQKNGGSSGGTTPVAVVNSPVHMNVDSFGKLHH
LVGEHGLCRTSSRLSGFNVQCPLPSPQANMLNCELQNCPYCASILQDPEFEFSESDSYES
GDDNTGVYEFTQDVKHGDQRDQIQQQRNKKRKKKKEPKERNKIARFWKAFGNKLKRIVES
KYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIWGY
IKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTM
DNVATFCMLLMLFIFIFSILGMHLFGCKFGLKTDTGDTMPDRKNFDSLLWAIVTVFQILT
QEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDED
KTSINFEEEIEKLKELRASELKMYSLAVTPNGHLEGKGSMPPPIIMRTAATPMPTPKCSP
HMDAVYPFADSRRGSNASIDPLSFDQKSLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAP
SLKKKSQCGERESLLSGEGKGSTDDEAEDAKLSAVSRPPLHRRAESLDCRGALEMPELLH
VPGVRHHPLNVSPVAMLPAEYQDCNGKMLHVPSEFYLHVDGHKEDTLDYDDDMEDSYCYR
IRKALEPYKPEWCKTHEDWSLYLFSPQNRLRANCQKVIAHKMFDHIVLVFIFLNCITIAL
ERPDIDPNSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGILVF
VSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNI
VLICCAFFIIFGILGVQLFKGKFYHCEGLDIRNISTKADCRNAHYRWVRRKYNFDNLGQA
LMSLFVLSSKDGWVNIMYDGLDAVGIDQQPSQNHNPWMLLYFISFLLIVSFFVLNMFVGV
VVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKAIYMSEAQRRPYYANYSPARKYIHM
LCTSHYLDLFITFIIGVNVITMSMEHFNQPKSLDEALKYCNYVFTIVFVFEAVMKLVAFG
FRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMA
TGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFN
NFGMAFLTLFRVSTGDNWNGIMKDTLRECHRDDKHCLSYLPIISPVYFVTFVLIAQFVLV
NVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGVNTPVRVPDGGQGTSKPGSPLLLKH
PALEALSCESVSLAIPDLDLLEGGEDLLMEPASFHTSPYRHLLTPSHNAPGGEAKEAAAG
IGEPQNLLTVRKISVARMHSLPNDSYMFRPVVPAKSPFPLHEVDLEAYSYKSPRGSITSV
HSQPVGTCSSLRVPRDAFRPTTPPPRQEGGGPWKLLPPRAAPRSPSLNRLLCRQEAIQRD
SLDGPNADSKAEPCENLPPKMLSQSILGPPLLHPAPTSLPGTPPLPHASPHRPSSVCTRK
HTFSQHSIPRRPSSCNSNPDSSLFESSDLADEEVSHINSSARDWRGQPDGSDPADSPFAS
PAPSPAPLKNCSTTSLGGNGKEKDLKKFYSVDTRGFLAKPTWADDQRRHSIEICPFVDDG
DRSFAESSEEKRKLPLHIQPESEYIHGVRRKKKMSPPCISIDPPVEEESNTSTRTKASEN
SLLRRRTPSCESTAYRDSLDLADNQPGDPGSKAERRGPPACRGEHLTIPNFSFEQSEAGS
SAVALPDCLLDRGQATPASADSRPDDDGAALELQKMGHSQAQLSNPEQSQEVLGGTRSPL
LRKHGLVPAITATEEEVDEPV
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagagaagagaacctttccagcccctgacgagcgacgaggtgcaagtc
cccatagcttccggcgcagccaccggcaaggcatcccagccaggggaggagaaagatgag
gacaccctcagtgcttgtaaatccatccaggacagtctggcttcggcaggatcatccacc
cgggatccagcccacgagggagagaaccaggtcccttaccctgcactggcctccactgtc
ttcttctgccttcaccagacaactcgcccacgaagctggtgtctcaaactggtctgtaac
ccctggttcgagcacgtcagcatgctggtcatcctcctgaactgtgtcaccctcgggatg
tttcagccttgtcaagatgacaaatgcaagtctgagaggtgcaccattttggaggcgttt
gatcatttcatctttgccttcttcgctgtggagatggtcatcaaaatgatagctctggga
atcttcgggcagaagtgttacctaggagacacgtggaatcgcctggacttctttatcgta
attgcgggcatgatggaatattccttggatggacacaacgtcagcttatctgccatccgt
actgtccgtgtactcaggcctttgcgagccattaacagggtgccaagtatgcgcatactc
gtcaccctgctgttagatactttgcctatgttaggcaacgtccttctgttgtgcttcttt
gtctttttcatctttgggatcgtcggggtgcagctgtgggccgggctgctgaggaacaga
tgtttcctagacaccaattttcaaatgacgtacaacttgactttcctgaatccctactat
cggccagaggaaagcgaggagaatccgttcatctgctcgtcccaccgggataacggaatg
cagaaatgttccagcatcccgaaccggaaggagtacaaggtggaatgtactttgagcatg
gactcttacaaccaaaattcgtacaccctggacttcagcagcagaaacgcctgcatcaat
tggaaccagtattacaacatttgcaggacgggggagctcaacccgcacaatggagctatt
aattttgataatattggctatgcttggatagctatttttcaggttataaccctggaagga
tgggttgacatcatgtattatgtcatggatgcgcactctttttacaattttatatatttt
atactacttataatagttggttctttcttcatgattaacttgtgcctggttgtgatagca
acacagttttccgaaacaaaacagcgggagaatcagctgatgcaagagcagcgagcccgc
tacctctcaaacgacagcacaatcgccagcttctccgagccggggagctgctacgaggaa
ctcctcaaatacatctgccacattttcaggaaagtcaagaggaggacgttgcgcctctac
aacaactggcagagcaagcgaaggaaaaaggtcaaccccaacggcggagacgacggccaa
ggccgccggagcaagaagcgcatcacctccattcaccacctgatccaccatcatcaccat
catcactatcacatcagcaacgggagccctcacgggccacgctccaaccctgagatctgc
gaccttgagctcaaggtcatgaagcctggaagtcaactcatgcttccgccgccatccccc
aacctccggaactctgcggctccagattcggagtccgtccatagcatctaccatgcagac
tgccacgtggaagggcccccgatgaaatgcaagtcttccagcgtcacggcgggggtcaag
ctctccaatcacggcaacatgaactacccgaccattttgccttctcccgttgccagggct
ggcgtcaccccggcgtcggtggggcagaaaaatggcgggagcagtggcggcaccactccc
gtggctgtggtcaatagcccggtgcatatgaacgtggactcttttgggaagctccatcat
ttggtcggagaacatggtctttgtcggacgtccagcaggttgtctggcttcaatgtgcag
tgccccctgcccagcccccaggccaacatgctgaactgtgagctgcagaactgcccctac
tgcgccagcatcctgcaggaccccgagttcgagttcagcgagtcggacagctacgagtcg
ggcgacgacaacaccggcgtctacgagttcacgcaagatgtgaagcacggggaccagagg
gaccagatccagcagcagaggaataagaagaggaagaagaagaaagagccaaaggagagg
aataagatagccaggttctggaaggcgtttggcaacaagctgaagagaatagtggagagc
aagtatttcaaccgggggattatgatcgccattctcatcaatacactgagcatggggata
gagtaccacgagcagccggacgagttgacaaatgccctggagatcagcaacatcgtcttc
acaagcatgtttgccctggagatgctcctgaaactactggcctttggcatctggggatac
atcaagaacccgtacaacatttttgacggcatcattgttgtgatcagcgtctgggagatc
attggccaatcggacggaggcctctcggtgctgagaaccttccgacttctccgggtcctc
aagctcgtgcgtttcatgcccgctctccgacgccagctggtggtcctgatgaagaccatg
gacaacgtggccaccttctgcatgctcctcatgctcttcatcttcatcttcagcattctt
ggcatgcatctttttggatgcaagtttggcttgaaaacagacacaggagacacaatgccg
gataggaagaattttgattccttgctgtgggctatcgtcactgtgttccagatcctcacc
caagaagactggaacgtggttctgtacaacgggatggcctccacctcttcctgggctgct
ctctatttcgtggctctgatgaccttcggaaactacgtccttttcaacctcttggtcgcc
atcctagtggagggtttccaggccgagggtgatgccaacagatccgacaccgatgaggac
aagacatccatcaactttgaggaagagattgagaagctgaaggaactccgtgcttcggag
ctgaagatgtactctctcgccgtcacccccaatggccacctggagggcaaggggagcatg
cccccgccgatcatcatgcgcactgctgccacgcccatgcccaccccaaagtgctccccg
cacatggatgccgtctacccctttgcggactccagaagagggagcaacgcctcgatcgac
cctctgagcttcgaccaaaagtccttgtccagcctccgcagctcgccctgcgccaactgg
ggcaccagcagcaactggggcagccgccggtccagctggaacagcctcgggcgggctccc
agcctgaagaagaagagtcagtgcggggagcgcgagtccctgctctcgggagaaggaaaa
ggcagcaccgacgatgaggcggaggatgccaagctcagcgccgtcagccggccccccttg
caccgccgggcggagtctctggactgcagaggtgccctggagatgcccgaactccttcat
gtccccggggtgcgccaccaccccttgaacgtcagccctgtggcgatgctgcccgccgag
taccaggactgcaatggcaagatgctccacgtgcccagcgagttctacctgcacgtagat
gggcacaaggaggacacgctcgactacgatgatgacatggaggacagttactgctacagg
attcgtaaggccctggagccctacaagccagagtggtgcaagactcatgaggactggtca
ctctatttgttttcacctcagaatcggcttcgggccaactgccagaaggtcatcgcgcac
aagatgtttgaccacatcgttctcgtcttcatcttcctcaactgcatcaccatcgcattg
gagaggccggatatcgaccccaacagcacggagcggatattcttgagcgtctccaactac
attttcactgccatctttgtcgccgagatgatggtcaaggtcgtggcccttggctttttc
tccggggaaaacacctatctccagagcagctggaacgtcctggacggaatcctcgtcttc
gtgtctatcatcgacatcatcgtttccatggcgtcggcaggcggggctaagatcctgggg
gtccttcgcgtacttcggctgctgcgtactttaagacccttacgagtcatcagcagggcg
ccgggactgaagcttgtcgtggagacactgatatcctctctcaggcctatcggcaacatt
gtgctgatctgttgtgccttcttcatcatcttcggcatcttaggcgtgcagctgtttaaa
ggcaaattctaccattgtgaggggttggacatccgaaacatctccaccaaggctgactgc
agaaacgcccactacaggtgggtccggcggaagtacaacttcgacaacttggggcaggcc
ctaatgtccttgttcgtcctctcctccaaagacggctgggtgaacatcatgtatgacgga
ctggacgcagttggcatcgaccagcagcccagccagaaccacaacccttggatgctcctc
tacttcatctccttcctcctcatcgtcagcttcttcgtgctcaacatgttcgtcggggtg
gtggtggagaacttccacaagtgccggcagcaccaggaagcggaagaggcccggcggcgc
gaggagaagcggctccggaggctggagaaaaagcgcaggagtaaggcgatatacatgtct
gaagcccagcggcggccatactatgctaattactcgcctgcccggaagtacattcacatg
ctctgcaccagtcactacctagaccttttcatcaccttcatcatcggagtcaatgtcatc
accatgtcaatggagcatttcaaccaacccaagtcgctggatgaagcactgaaatactgc
aactacgtcttcaccattgtctttgtgtttgaagctgtgatgaaactggtagcatttggg
tttcggagattcttcaaagacagatggaaccaactggaccttgccattgttctgctgtca
atcatgggcatcacactggaggagattgagatgaacgccgcgctgcccatcaaccccacc
atcatacgcatcatgagggtgctcagaattgctagagtactgaagctgctcaaaatggcc
acagggatgcgggcactgctggacacggtggtccaagccctcccgcaggtagggaatctc
ggcctactctttatgctcctctttttcatctatgctgccctgggagtggagttgtttgga
aagttagactgcagcgaggacaacccttgcgagggcttgagccggcatgcgaccttcaac
aactttggcatggccttcctcaccctcttcagggtgtcaacgggagacaactggaacggg
atcatgaaggacacgctccgggaatgccacagggacgacaaacactgcctcagctacctg
ccgatcatctccccggtttacttcgtcaccttcgtcctcatcgcccagttcgtcctggtc
aacgtggtggtggctgtcctgatgaagcacttggaggaaagcaacaaggaggccaaggag
gatgctgagatggatgccgagatcgagctggagatgtccaggggggtcaacactccagtc
agagtccccgatggcggccagggcacttctaagccagggtcgcccctcctgctgaagcat
cctgcactggaggctctgagctgtgagagtgtctctctagccatcccagacttagacctg
ctggagggaggggaggatctcttgatggagcccgcgtccttccacacttctccttaccgc
catctcctgacaccctcccacaatgccccaggcggagaggcgaaggaagcagctgctggc
attggcgaaccccagaatctcctgaccgtccgcaagatctcggtggccaggatgcactcc
ttacccaacgacagctacatgttccgccctgtggtgccagccaaaagccccttcccgctc
catgaggtggatttagaggcctattcgtacaagtcaccaagagggtccatcacctctgtt
cattcccagcctgtggggacttgctcttcgctgagggtcccacgggatgcctttcgtcca
accaccccgcctcctcgccaggaagggggaggtccatggaagcttctaccaccacgagct
gctccacgatctcccagtctcaacaggctgctctgtagacaggaggccattcagagggac
tcattagatggtccaaatgcagattctaaagctgaaccctgcgagaacctcccaccaaag
atgctgtcccagagcatcctgggcccgcctctgcttcaccctgccccaacgtctctacct
gggacacctccccttccccatgcatcaccccacaggccctcaagcgtctgcacccgcaaa
cacactttcagccagcacagtatcccgcgcaggccgtccagctgcaacagcaacccagac
agctcgctctttgaatcttcagacctggccgatgaagaggtcagccacatcaacagttcc
gcgagggactggcgggggcagccggacggcagcgaccccgccgactcccctttcgcctct
cccgccccatcccccgcccccctcaagaactgcagcacaaccagtttaggcggcaacggc
aaagagaaagacttgaagaagttttacagcgttgacacgcgagggttcttggccaagcca
acttgggcggacgaccaaagacggcactccatcgagatctgcccgttcgtcgacgacggg
gaccgcagcttcgcggagtcgtcggaggagaagaggaagctccctctccacatccagcca
gagtccgagtacatccacggcgtccggcggaaaaagaagatgagcccgccttgcatttct
atagatcctcccgtggaggaagaaagcaacacgtccacacgtaccaaagcatccgagaac
agcctgctgaggaggaggaccccgtcgtgcgaatccaccgcctacagggactccttagac
cttgcggacaaccagcccggagatccgggctccaaggcagagcgccggggcccacccgcc
tgccgtggagaacatttaaccatcccaaacttctcctttgagcagtccgaggccggctcc
agtgcagtggccctcccagactgcctcttggatcgcggccaagccacgcctgcctctgcg
gattcccggcccgacgacgacggcgcggctctggaactgcaaaagatgggccactcgcaa
gcgcagctcagcaaccccgagcaaagccaagaggttcttggtgggactaggagccccctc
ctccggaagcacggactggtccctgcgatcacagcaacagaggaagaggtggacgaacca
gtatag
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integrated database retrieval system
