Podarcis raffonei (Aeolian wall lizard): 128402145
Help
Entry
128402145 CDS
T09310
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128402145 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128402145 (MYO5C)
04131 Membrane trafficking [BR:
praf04131
]
128402145 (MYO5C)
03029 Mitochondrial biogenesis [BR:
praf03029
]
128402145 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
praf04812
]
128402145 (MYO5C)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128402145 (MYO5C)
mRNA cycle factors
P-body specific factors
128402145 (MYO5C)
Membrane trafficking [BR:
praf04131
]
Others
Actin-binding proteins
Myosins
128402145 (MYO5C)
Mitochondrial biogenesis [BR:
praf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128402145 (MYO5C)
Cytoskeleton proteins [BR:
praf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128402145 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Csm1_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
128402145
NCBI-ProteinID:
XP_053222058
LinkDB
All DBs
Position
14:10840886..10891327
Genome browser
AA seq
1742 aa
AA seq
DB search
MALSDLYTQYNRVWIPDPEEVWQSAEITRNYKNGEDLLHLQLEDGTELKYPVDPRALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSVIVSGESGAGKTVSAKYAMRYFAT
VSRSSSNTQVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASARRPEFEHLKLANPEEFNYTNMGGNAVIEGVNDY
ANMMETQKTFTLLGLKEDFQMDVFKILAAILHLGNVQIAPVGDERSSVSLDDKHLHIFCD
LLDLESDKVARWLCHRKIVTTSETVVKPMTKLQALNARDALAKKIYAHLFDFIVERINKA
LEFSGKQHTFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKENI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPQGTDENWLLKLYNNFGNKNPLFEEPR
MSNSSFIIQHFADKVEYKSDGFLEKNRDTVYEVLIEILRSSKFRLCANFFQDNPVPVSPF
SSVIKVKSAKTVIKPPNKQFRTTVGNKFRTSLYLLMETLNATTPHYVRCIKPNDQKLAFE
FDSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYRILMSQHELSLTDKKQICKIV
LQRLIQDPTQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIVIQKNARGWLQRKKFLHIR
QAAVIIQQYFRGQRTVRQAITARALKEAWAAIIIQKYCRGYLVRRLCHLIRVAVLTIQAF
TRGFLARRKYRKMVEEQKALVLQKYARAWLARRRFQSIRRFVLNIQLSYRVQRLQKKLED
QNKENNVLLERLTTLASNHSNGIETIQKLQLDLEKLAAQKKMSEEKEKKRREDYEQKVSK
LENRNSELQEQKKQLEKELKEKNEEMKEKMDDLTTQLFADVQKGERQRMMLEKNFQNQKQ
DYEEKMDSLKAEIKFLKDENDQLQKKVREKQQIEDGLKMEVEELSNQAKTIPELHKEIEL
IQSQKLDVEKQLQCQKREMRDKLSDITMQLRESYDFADVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKENYEREIDGLNSKTEHLSQEINHLQKLFREENDLNDSIRLQ
VTRLTSENMMIPDLKQQIAELQKQKTDLENRLQEETAKNKEKMEERADLLRHNQEKEGTQ
IRVLHIQNEIRTKEKERLIATSDELQDINDHMEKRHEGEDETKYKMWQDMAYLTTENTDL
EEEMDKKDRIIKKLEDQIKTLRKSIETAHEEPMLSMPKEYIGMLQYRKEDEGKIVQNLIL
ELKPRGVVVNMIPGLPAHILFMCVRYADYLNDDGMLKSFMNMSINSIKQVIKEHVEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNTPQQNKNNLKHFDLLEYRQVLSDLAIRIYHQF
IIVMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYT
TMCQNGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKQK
NLQSSSAKETLEPLSQAAWLLQVKKTTDEDAKEIYERCTSLTAVQIVKILNSYTPIDDFE
KRVTPSFVRKVQAMLNNRENSPLLMLDTKYLFQVTFPFTPSPHALETIQIPSSFKLGFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagcgacctctacacccagtataacagagtttggattcctgatcctgaagaa
gtctggcaatctgctgagatcacaagaaactataaaaatggagaagacctacttcatctg
cagctagaagatggcacggaattgaaatatccagttgatcccagagctttacctcctttg
cgaaatccagacatacttgtcggtgaaaatgacctcaccgcacttagctatcttcatgag
cctgccgtcctacacaatctgaaagttcgctttgtcgagtccaagctgatttatacctac
agcgggataattttggttgcaatgaacccctacaagcagctgccgatatatggagatgcc
attatccatgcctatagtggtcagaatatgggggatatggatccacatatatttgctgtg
gcagaagaagcttacaagcaaatggcaaggaacaacaagaatcaatctgttatagtcagt
ggagaatcaggagctgggaaaacagtttcggctaaatatgctatgcgatactttgctact
gtcagtagatctagcagcaacacgcaagtagaggataaagtcctggcatcgaatccgata
acagaggctgtcggtaatgctaaaaccacacgcaacgacaacagcagccgctttggaaaa
tacacagaaatcagttttgataggaggtaccagatcattggtgcaaatatgagaacatac
ctgcttgagaaatccagagttgtcttccagtcggagaatgaaagaaattaccatatattt
tatcagttatgtgcatcagctcggagaccagaatttgagcaccttaaactggcaaacccc
gaagaatttaattatacgaacatgggtggaaacgctgtgattgaaggagtgaatgactat
gccaacatgatggagactcagaagacattcaccctgctaggtttgaaggaagatttccag
atggacgtttttaaaatattggcagccattctgcacttaggcaatgtgcaaatagctcct
gttggtgatgaaagatcttctgttagtctggatgacaaacatctccacatattctgtgac
ctcctggatttagaaagcgacaaagtggcacggtggctgtgccacagaaaaattgtcacc
acctctgaaactgtagtgaaacccatgacaaaactccaagcccttaatgcccgtgatgct
ttggcaaaaaagatttatgcccacctttttgatttcatcgtggaacgaattaacaaggca
ctggagttttctggcaaacagcacacttttattggtgttttggacatctatggatttgaa
acttttgatatcaacagctttgaacagttttgcatcaattatgccaacgaaaagctgcag
cagcaatttaacctgcatgtctttaaacttgagcaagaagaatatatgaaagaaaatatc
ccatggacgctcattgacttttatgacaaccaaccagtcattgatcttattgaagctaaa
atgggcattttggagcttctggatgaagagtgcctgttacctcaaggaactgatgaaaac
tggctccttaagttatataacaattttggaaacaaaaacccactctttgaagagccaaga
atgtcaaactcttcttttataatccagcactttgctgataaggtggagtataaaagtgat
ggatttttggaaaaaaatagagacacggtatatgaagtattaattgaaatcttacgaagc
agcaagtttcgactatgtgcaaactttttccaagacaatccagtacctgtctccccattc
agctcggtgatcaaagttaagtctgcaaaaacagtgatcaagccacctaataagcagttc
cgtacaacagttggcaataagtttcgtacttccttatatttactaatggagacacttaat
gcaaccacacctcactatgtgcgatgcatcaagccaaatgatcagaagctagcgtttgag
tttgattctaaaagagtggttcagcaattgcgagcttgtggtgttttagaaacaattcgg
atcagtgctcaaagttacccatctaggtggacttacattgagttttacagccgttacagg
attctcatgtctcagcatgaactctctcttactgacaagaaacaaatttgcaagattgtt
ttgcagcggctcattcaggatccaacccaataccagtttggtagaacaaaaattttcttc
agagcagggcaggttgcttatctggaaaaattacggtcagataagttgaggcaagcatgt
attgtgattcagaagaatgccagaggttggctgcagcggaagaaattcctccatatcaga
caagcagcagttataatacagcagtacttccgaggacaacggactgtacgacaagctata
actgcaagagccttgaaagaagcatgggcagctatcattatccagaagtactgccgggga
tatctagtacgtaggctttgccatcttatccgtgtggctgttttgacaatccaagctttt
actcgaggctttctggcaaggaggaaatacagaaagatggtggaagaacagaaggctttg
gtcctccaaaaatatgctcgcgcctggcttgctcgacgcagattccagagcattcgccgt
tttgtattgaacatccaactttcatacagggtacagcggctgcagaaaaaactagaagac
cagaataaggagaataatgttctgttggaacgattgaccactctagcctcaaatcactcc
aatggtatagaaacaattcagaagcttcagctggatcttgaaaaattagctgcgcaaaag
aaaatgtcggaagaaaaagagaagaagcgtagagaagactacgaacagaaggtgtcaaaa
cttgaaaaccgcaactcagagctgcaggagcagaagaagcaactagaaaaggaacttaaa
gagaagaatgaggaaatgaaagagaaaatggatgacctgacaacacagctcttcgccgac
gttcaaaaaggagaaaggcaacggatgatgcttgagaagaacttccagaaccagaaacaa
gactatgaagaaaagatggactcactcaaggcagaaataaagtttctcaaagatgaaaat
gatcagctgcaaaagaaagtcagggaaaaacagcagattgaagatggcttaaaaatggaa
gtagaagaactttcaaaccaagcaaagacaatccctgaactgcataaagaaattgaactg
attcagtctcaaaaactggatgtggagaagcaactacagtgccaaaagcgtgaaatgaga
gacaagttgtcagacattacaatgcaactccgtgagagctatgactttgcagatgtaagg
agcagattgtctactgaagatttggaacatctaaatgaagatggggaactttggtttgct
tatgaaggcctgaaaaaggccacaagagtattggaaagccatttccagtcacagaaagag
aactatgaaagggagatagatggcctcaattctaaaactgaacatcttagtcaagaaata
aaccatttgcagaaactgttcagggaggaaaatgacctcaatgacagtatccggctccaa
gttacccgactaacctcagaaaatatgatgatcccagatcttaagcagcagattgctgag
cttcagaagcagaagacggatcttgaaaaccgtcttcaagaagaaactgcaaagaataaa
gagaaaatggaagaaagggcagatctgctgcgtcataaccaggaaaaagaaggaacacaa
ataagagtattgcacattcaaaatgaaatacgcacgaaggaaaaagaaaggctgatagcc
acatctgacgagcttcaggacataaatgatcatatggagaagcgacacgaaggagaggat
gaaaccaagtacaaaatgtggcaagatatggcatatcttactacagaaaatacggatcta
gaagaggagatggataagaaggacagaataataaagaaacttgaggatcagatcaagacc
cttagaaagtctatagaaacagcccatgaagaacccatgttgtccatgccaaaagaatac
attggaatgttgcagtacagaaaggaagatgaaggaaaaattgttcagaacctgatcctt
gaactgaagccccgtggagtggtggtaaatatgataccaggacttccagctcacatcctc
ttcatgtgtgtgagatatgcagattatctgaacgatgatggcatgctgaaatccttcatg
aatatgtcaatcaatagtatcaaacaagtaattaaggaacatgttgaagactttgagatg
ttgtccttctggctttcaaacacatgccattttcttaactgtctgaaacagtacagtgga
gaagaggaatttatgaagcacaatactccacaacaaaataagaacaatctgaagcacttt
gacctcttggaatacagacaggtccttagtgatctagccattcgcatttatcatcagttt
atcattgtaatggagaacaatattcaaccaatgatagtgcctggaatgctggaatatgaa
agcctccaggggatttctggcttaaaaccgactggattccgcaagcgctcctccagcata
gacgacacagatgcctacaccatgacctccatcctgcaacagctcagctatttttatacc
acaatgtgtcagaatggcttggactcagagctcctaaagcaggccgtgaagcagcttttc
tttctgattggagcagttacccttaacagtctattccttcgcaaggatatgtgctcttgt
cgaaaggggatgcagataaggtgtaatatcagctatctcgaagagtggcttaagcagaag
aatctgcagagcagctctgccaaggagacgttggaacctctttcccaagcagcttggctc
cttcaggttaaaaagaccacagatgaggatgccaaggagatttatgaacgctgcacatcc
ctcactgctgtgcagatagtaaaaatcctcaactcctacacacccatagatgattttgag
aaaagggtgactccatcattcgttcgtaaagtgcaggctatgctgaacaacagagagaat
tctccgctgttgatgctagatacgaaatatctctttcaagtgacatttcctttcacccct
tcaccgcatgctctggaaacgatacagatccccagcagtttcaagcttggctttctcact
agaatataa
DBGET
integrated database retrieval system
