Podarcis raffonei (Aeolian wall lizard): 128402190
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Entry
128402190 CDS
T09310
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128402190 (RBBP6)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128402190 (RBBP6)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
U-box type E3
128402190 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
128402190
NCBI-ProteinID:
XP_053222155
LinkDB
All DBs
Position
14:complement(29214623..29244009)
Genome browser
AA seq
1757 aa
AA seq
DB search
MSCVHYKFSSKLKYDTVTFDGLHISLCDLKRQIMGREKLKAGDCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKCTSKTYVISRTDPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPTYTCFRCGKAGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVQDPNTKGAMLTNTGKYAIPTIDAAAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTSLLESEEHTCPNCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQAQPPRPVVQRNVPSLQRPTGSRQQD
PLIIPATSAPLHTPASLTLSSAPGQSVSSTASLSVSHSATTSASEVSAPMSLAIHADKPE
GPFREGDGIGPAAAIVTASEHSKPPSTLSINTVMEEKGYQVPVLGQPALPGQLGCHGHSI
PTMGQPMRTNPVRSAGNRSGWEPSSNRGRPHSDRTQRTQAPTLPASTPVFVSVPPPPLYP
PPPHALPLPPGVPPPQFPPQFPPGQPPPAGYTVPPPGYPPAPANISTPWVPTPVPTAHSN
AIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSYSRS
KSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRS
RSRSHGYHRSRSRSPPYRRYHSRSRSPVYRAQSPNKRPVQQAEGEREYFGRYREIPPYDM
KAYYGRSVDMRDPFEKERFREWETYREWYEKYYKGYTAGAQPRPLLNRENFSPERFGPPG
PRRENSPYVRGRRDDYPGGLGHRNRNVGTGFSEKLPSREGHGMKEVAKLKDKEVEIPPGD
VKGNKHKKHRKRRKGDEGEGFPNADLLEGSRKPRDPAPGEEGSKPDPLFMLPSRDDATPV
RDEPMEADSVAFKPTSDKERKEKPKAKAEKTKRKAEGNATTRKEVQVKPAKAPQEKVEAD
REKSPRAEPAKKAKEELPKADPIKSVSSQKDEKALGTPRKVHPRSSKEHPETRSTKEEKA
KKDPPKEVKQEKQSSKEEKSKKPVDKNKPVDAKPEKRKRKTEEKGDKDHETPSLKMSKPD
IVESKPLPKGKTEPEGEKAERTPEKDKAVLPVAPAKKIKLNRETGKKIASVENVPPVKEA
LAEKPEPPPSSKGKQEKAKGKLRRKAAAADGSGLMLVDYTSTSSAGGSPVRKSEDKLDMK
RTVIKTMEEYNNDITAPAEDVIIMIQVPQSKWDKDDFDSEEEEEEEDVKSVQVPSAAGKP
SSVVKNVSTKPSNSLKHSEKDPESSQPESKNSKTVLLSNEKGKLKERDHTASDKDSSEKR
KSGTQQEKERSERSAEQGNAKNCSSNSSKEARSSDKHEAAYGSSGKDFTPNWDKKSDYDS
SSSRDYSGSKRREERSDLARKKVSPPRSRDSATSGQKNKARDERTEQPKKEAGDSKRGSY
SPPRDRRPNDHKAPYDSRRSAEQHKSQERSSGKEREKRPSSETTWSNKERVAGGNRSLHR
RCSPEAREPGTTVPNDKGTTKPKPLPSHSARLSSDPTRETDEAAFVPDYNESDSDSNVST
KQEDSPGRATQEGKDKAPENSKPKEGAVGAAVLAPAVGGSQSQSSPSISRSQSPSESQGR
SRSSSASLADSQDSKKKRKKKDKKKHKKHKKHKKHKKHGGTESEAERSQKHKHKKKKSKK
NKEKEKGDDQKVKVAPL
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtgcactacaagttctcctcgaagctcaagtatgacacggtcaccttcgat
ggactccacatctcgctctgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gccggcgactgcgacctccagatcactaacgctcagaccaaagaagaatatactgatgat
aatgccctgattcccaagaactcatctgttattgtcagaagaattcctattggtggagta
aaatgtacaagcaaaacttatgtcataagtcgaactgatccagtgagtggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagaccgccaatctg
gctgaagccaatgcttccgaagaagataaaattaaagctatgatgtcacagtctggccac
gaatatgatccaatcaattacatgaagaaacccctgggtccgcctccgccaacatacact
tgctttcgttgtggaaaagctggccattacataaagaactgcccgaccaatggggacaaa
aacttcgagtctgttcccaggattaaaaagagcacaggaattccccgaagtttcatgatg
gaggtgcaggaccctaataccaagggtgccatgctcacaaacacagggaaatatgccatc
ccgactattgatgctgctgcttatgctataggaaagaaagagaagccccctttcctgcca
gaggagccatcgtcttcctcagaagaagatgaccctattccagatgagcttttgtgtctg
atttgcaaagatataatgactgatgctgtggtcattccctgctgtggaaacagctactgt
gatgaatgtatcagaacatcgctgctagaatcggaggaacatacctgcccaaattgtcat
cagacagatgtttctcctgatgcgttaattgccaacaaatttttacgccaggctgtaaat
aacttcaaaaacgaaactggctacacaaaaagacttcgcaaacaggcccagccacctaga
ccggtagttcagcggaatgtgccttcattacaaaggccaacaggttccaggcagcaggat
cccctcataattccagccacttctgctcctcttcatacacctgcatccctcaccttgtca
tcagctcctggccaatcagtatcttcaacagcctcgttgtcagtcagccattctgccacc
acatctgctagtgaggtctctgcaccaatgtccctggcaattcatgctgacaagccagaa
ggacctttccgtgagggcgatggtattggaccagctgctgctatagtgactgcctcagaa
cactcaaagccaccttccacactgtcaattaatactgtgatggaggagaagggctatcag
gttcctgttcttgggcagccagctttgccaggacagctgggctgtcatgggcattcaata
cccaccatgggtcaaccgatgagaactaatcctgttcgctctgcaggcaataggtcaggc
tgggagccaagttcaaaccgaggacgcccgcatagtgaccgtacacaaaggactcaggcc
ccaacactgccagcatcaacaccagtctttgtttccgtgcctcctcctcccctgtatcct
cctcctccccatgcacttcctcttccaccgggggtacctccaccacagtttcctcctcag
tttccacctggtcagcctccacctgctgggtacactgtcccccctccgggatacccccca
gctccagcaaacatatcaacaccttgggtaccaacaccagtaccaacggctcattcaaat
gccatcccaacgacacaagcacctcctctctctagggaggagttttacagagaacagcgg
agacttaaagaggaggaaaagaaaaagtcaaagcttgatgagtttacaaatgattttgct
aaggaactgatggaatataaaaaaatccagaaggaacgcaggcgctcttattcccggtcc
aaatcgccatacagtgcatcttcatactcaagaagttcctatacgtactccaagtcccga
tctggctcatctcgttctcgatcctattctcggtcattcagccgttcccattcccgctcc
tactcacgatctccgccatacccacgaaggggcagggggaagagtcggaactaccgttcc
aggtcaagatcccacggctatcaccgctcaagatccaggtcacccccctacagaaggtat
cattctcgatcgaggtctccagtttacagagcccagtccccaaacaaacgccctgttcag
caggcagaaggggaaagggaatacttcggccgataccgagaaattccaccttacgacatg
aaagcgtactatggcagatctgtggatatgagagacccatttgagaaagagagattccgg
gagtgggagacctaccgggagtggtacgagaaatactacaagggctacacagctggagcc
cagcccaggcctttgcttaacagggagaacttctccccagagcgctttggtcctcctggc
cctaggcgagagaattccccatacgttcggggccgtagagacgattaccctggagggctg
ggccatcggaatcggaatgtaggtactggcttctctgagaagcttccaagtagagagggc
catggcatgaaagaggtggccaaactgaaagacaaggaggttgagatcccaccaggcgac
gtgaagggaaacaaacacaagaagcaccgcaagagaaggaagggggacgagggtgaaggc
ttccccaatgctgacctgttggaaggctcgcggaagccacgggatcctgcccctggggaa
gagggcagcaagcctgacccactcttcatgctcccaagcagggatgatgctactcctgtc
cgagatgagccaatggaagcagattccgttgccttcaaacccacttctgacaaggaaagg
aaagagaagccaaaggcaaaagccgagaagacaaagcgaaaagcagaaggcaatgccact
accaggaaagaggtgcaagtgaagccagctaaagcaccccaagagaaagtggaggcagat
cgtgaaaaatccccccgggcagaacctgcgaaaaaagccaaggaggagttgccaaaggct
gatcctattaagtcagtgtcctctcagaaagatgagaaggcacttggtacgccacgcaag
gttcatccccgaagctcaaaagagcatccagaaaccagatcaaccaaggaggagaaggcc
aagaaagatccccccaaggaagtcaagcaagagaagcaatcgagtaaggaggagaagtca
aagaagcctgtggacaagaacaagcctgtggatgcaaagccagagaaaaggaaaaggaaa
accgaggaaaaaggagacaaagatcacgaaacgccgtcgttaaaaatgtccaaacctgac
attgtagagtcaaaaccgttgccaaaggggaaaactgagccagagggtgaaaaagcagag
aggacccctgaaaaggacaaagctgttctgccagttgctcctgcaaaaaagattaagctg
aaccgagaaactggcaagaagattgccagtgttgaaaatgtccccccagtgaaggaggct
ctagccgagaagcctgagccaccccccagcagcaaagggaaacaagagaaggcgaaaggg
aagctgaggaggaaagccgcagctgccgatggatctggtctgatgctggttgattatacc
agcaccagctctgctggaggaagccctgtgagaaagtcagaagataagctggacatgaag
cgaactgtcatcaagaccatggaagagtacaacaatgacataacagcccctgccgaagat
gtcatcatcatgatccaagttcctcagtccaagtgggataaagacgatttcgactctgag
gaggaagaagaggaggaggacgttaaatctgtgcaagttccctctgcagctgggaagccc
tcgagtgtcgtcaagaatgtcagcacaaagccatccaactccctcaaacacagtgaaaag
gatcctgaaagttcacagcctgagtccaaaaactccaaaacagtgttattgtccaatgag
aaagggaaactcaaagagagggatcacactgcatctgacaaagactcttctgagaaaagg
aagagtggcactcaacaggagaaggagcgctccgaacgcagtgctgaacaaggcaatgca
aagaactgctcttctaactcttccaaagaggccaggtcttcagataaacatgaagctgcc
tatgggtcctctgggaaggatttcactcctaactgggacaaaaagtctgactatgacagc
agcagtagcagagactattctggttccaagcgaagagaggaaaggagcgatctggcacgg
aaaaaggtctctcctcctcgcagccgtgattctgccacctctggacaaaaaaacaaggcc
agggatgagcgaacggagcagcccaaaaaggaggctggggactcaaagcgcggcagttac
agccctccaagggaccggaggccaaatgaccacaaagctccttacgactccaggcgttct
gcagaacaacacaagtcccaggagagaagttcgggcaaggagagagagaaacgcccgtcc
tctgagactacctggagcaacaaggagagggtggcaggtgggaacaggtccttgcaccgg
cgctgctcaccagaggcaagagagccagggacaacggtgccgaatgacaagggcaccacc
aagccgaagccactgcccagccactctgcccgcctctcgtctgacccaacgagggagacc
gacgaggcagctttcgtcccagactacaatgagagtgacagcgacagcaacgtctctaca
aagcaagaggactcccctggaagagccactcaggaggggaaggataaggcccccgagaac
agtaagcctaaggagggagcggtgggggcagcagtcttggcccccgcagttggcgggagc
cagagccagagcagccccagcatcagccgcagccagagcccttccgagagccaaggccgg
agccgcagcagcagcgccagcttggctgacagccaggacagcaagaagaagcggaagaag
aaggacaagaagaagcacaagaagcacaaaaagcataagaagcacaagaagcacggcggg
acagagtcggaggcagagcggagccaaaaacacaaacacaagaagaagaagtcgaagaag
aacaaggagaaggagaaaggagacgaccaaaaagttaaggtggcccccctctag
DBGET
integrated database retrieval system
