Podarcis raffonei (Aeolian wall lizard): 128402193
Help
Entry
128402193 CDS
T09310
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128402193 (RAI1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128402193 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
128402193
NCBI-ProteinID:
XP_053222162
LinkDB
All DBs
Position
14:complement(47338145..47558623)
Genome browser
AA seq
1954 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPASSQDSSRLENYRHQSQAGPHCERQRMVAKEYYGQQQQQPQ
PQPPQPPLPYQGYGENSTVEKYHRGNKQLRSQQLPGRPASFPNYAVQENSPYPARYSGEE
GLQAWGSPQQQPPPPPQPLLGGVAKYEENLLKKTAASSGSRQYHEQAPQLPFRTHSLHLQ
QQQQQQPTLTYPKLPRQKIQNDVASPMSFPQGAHFTQHSQSFPASSTYTSVQSGSQAAHS
YKSCNAPSAPPQHERTLGNAASLPSGQRVQGLHGYQPNRISYDQQQQQQQQQQQQQQQQQ
SMQGRHHAQEALHYQNLAKYQHYNQPGQSYCQADAPVRTPDQYYQTFSPSSSHSPARSVG
RSPSYSSTPSPLMPNLENFQYSQQSLSTGNFPASLSDHSHFMPLLNPSPTDGASPDAQPP
ANCKSMPKEKIPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSTGMPQKKGIKNPPR
TPEQLKGQHCSPEGNSYSAEQAGTPLSDPLSTPQSVHAETQDGDYLSGSEEQLERSFLYC
NQSRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHTSLPLESFTKFVTNERD
CPRLLLSALSQEELASEIIGLQDAINEKADKGWASPPAPNKDPDKSPFHLENHRTCLDSI
VKSPWSNQGDSNALAEPLKLDKALGGNNGKNFTEEVYNNSQVVFTTAETKNTLKTTSSVG
YNSKPNISAATSSSEATSFSCYSNATANSVGSENAMENFDWPDENLSDTWKELGSSLQGS
DLSKSLFSGKLSETSEEKKNACCLSLCDAEQAPQQAEGFDQPQEASKGENLTYDEATRAD
SERWLEDTTRQSCSGGDFSELPMMSSPDLKESDLEPEEYSSLCELAASEQKSLTYDAFTP
KPAENAPALSLQDTPGSAEEMANAAEKESATPPSHLSDQSVILLGPAVGTETKVKSWFES
SLHHLKPEEEVAGSENALPDKAETLAASLVTNQASLEQVPITSEPTSRGKSLRSKKVHCR
LSGGEEPVQPMSSPCTGNQAAGMVASKCPGPNNLIEMPSKSAHGQTPRFPAEGLPARMCT
RSFTALTEPRMPDPLEGAKASNPQEKSGKKTVCVLKQRAAFKARKANGKPSPKPSNSASP
PVSNLAQSEDSGHKAKEADGIETEAKDQQSMILRSRTRTQEVFYSKRRREKSAMDAGLKE
GKPPKKVLPNNHFPGSFKVSPQSRSERERKRLALPKARPGMGGKMSEQPLHSLKRKSAFI
PPVPAKKRNLVLRSNSHSGSNVKDEKPEASASLFKRMPLAKKAKAKLSPKNSCEVVLKSP
QVKENPDVCIKITSRAAFQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACRTATVS
FTVPAATSHSNPLSPSLPPEREQASKNAGAAPAAGEARPLNQALSQKAPAAPAAEQLCRS
PNNRSFRGKLMNSKKLSSNCFKGEAYSSPETLQHSGDGMAASGTGLLPKKRNRKGKVAAF
RTAKNSLEKCPHLSPALLFASREKAVAAAAAAAGKGEEGQREAKKPKAEDKGFSSAESSE
GRSSQAQTRAQKQRANHSNYNGYTKRQRKRLSRRKAPSVPSRCKSRTKRRHPQQAPLLSP
AEPEIRLKYVSCKRLRSDSRAPPFSPYVRVEKQDEFVTTCTVVNSPAEEARLHNSERSSS
SPSAQAGLSGAASLQQPRATLPLSSTMHLGPVVSKALNTTCLVCCLCRNPANYKDQGDLC
GPYYPEDCLPKKKSRLKEKIKVEGLGEEPPSPAERLLKATDNNCATSTPGGKPPRLDSGA
DSAKQSALRSSSRGMFRKLQSCYCCDERTEGEEAAVAAAAAAAAEKPRRHECGKVEQPPP
DPAGDTQEHWVHEACAVWTAGVYLVAGKLYGLQEAIKMAADVRCSSCQQVGATIGCCHKG
CAQTFHYICAIDTGCLLSEETFLLNCPRHKKQPL
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgcgaaaggtgtggtttccatggcaaccagcagaactaccagccggca
tcttcgcaagattcatcacgcctggagaattacaggcatcaaagccaggccgggccgcac
tgcgagcgtcagaggatggtggcgaaggagtactacggccagcagcagcagcagccgcag
ccgcagccgccgcagccccccctgccttaccaggggtacggagagaacagcaccgtggag
aaatatcaccgggggaataagcagctacgcagccagcaactcccaggccggccggcgtcc
ttcccaaattacgctgtccaagagaacagtccctatccggcccgttattccggggaggag
ggcctgcaggcctgggggtcaccgcagcaacagccgcctccgcctccgcaacccttgctg
ggaggggtggctaaatatgaggagaacttgttgaaaaagactgccgcttcctctggcagt
aggcagtaccacgagcaggccccacagctccccttccgaactcactccctgcacctccag
cagcagcagcaacagcagcccaccttgacctaccccaagctcccgaggcagaagatccag
aatgacgtggcctcccccatgtcgttcccgcagggcgcccacttcacccagcattcccag
tcgttcccggcctcctcgacgtacacgtccgtccagagcgggagccaggccgcgcattcc
tacaaaagctgcaacgctccctcggcgccaccgcagcacgaaaggactctggggaatgcc
gccagcctgccctctgggcagcgggtccagggcctacatggctatcagcctaaccgaatc
agctacgaccagcagcagcagcaacagcaacaacaacagcagcagcagcagcagcagcag
tccatgcaaggaagacaccatgcccaggaagcacttcactatcaaaacctcgcaaaatac
caacattacaaccagccgggacagagctactgtcaagccgatgcccctgtgcggactcca
gaccagtattaccaaacgttcagccccagttccagccattccccggctcgttcggttggt
aggtctccctcgtacagttcgacgccttccccgttgatgcccaacttggagaatttccaa
tacagccagcagtctctgagcacggggaacttcccagccagcctctccgaccatagccat
tttatgcctttgttgaacccttcgccgactgatggggcgagcccagatgcccagccgccc
gcaaactgcaagagcatgccgaaggagaagatccccgagaacctcttgtccgatctcagc
ctgcagagcctcacggctctcacctcccaagtcgaaaacatttccaacaccgtccagcag
cttctcctctccaagtccacggggatgccccagaagaagggcatcaagaacccgccaagg
accccagagcagctcaagggtcagcactgcagccccgaaggcaacagttactctgctgag
caggcggggactcccctttcagaccccttgagcaccccgcagtcggtccacgctgaaacc
caggatggggattacctgagtggatctgaggagcagctggaaaggagcttcctctactgc
aaccagagccgcagcccagctcgcgtcaacagcaactccaaggcgaagcccgagtccgta
tccacgtgctcggtgacttctccggacgatatgtccaccaagtcggacgactctttccaa
agcatccacaccagcttgccgctggagagcttcaccaagtttgtgaccaacgagagggat
tgccccagactgctcctcagtgccctgtctcaggaggagctcgcctctgagatcatcggt
ttgcaagatgctatcaacgagaaagcagacaaaggctgggccagcccccctgctccaaac
aaagaccctgacaaatcccctttccacttagagaaccacagaacctgcctggattccata
gtcaaaagtccgtggtccaatcagggggactcaaatgccctcgctgagcccttgaagttg
gacaaagctctgggggggaataacgggaagaatttcacagaggaagtctacaacaactcc
caggtggtgtttacaacagcagagacgaaaaataccctgaaaacgaccagctctgtgggc
tacaattccaaacccaacatctcggctgccacttccagctccgaggccacgagcttcagc
tgctactcaaatgccacggccaattcggtgggttctgaaaacgccatggagaacttcgac
tggccagacgaaaacctcagcgacacgtggaaagagctggggtcgagcctccaaggatca
gacctttccaagagtttgttctctggcaaactgagcgagacgtccgaggagaaaaaaaat
gcttgctgtttgagtctctgcgatgctgagcaggcgccccaacaagcagagggcttcgat
cagccgcaggaggcaagcaagggagagaatctgacttacgacgaggccaccagagcagac
agtgagcgatggctggaagacaccactaggcagtcctgctccggaggagacttcagtgaa
ctccccatgatgtcctctccagacctgaaagaatccgatttggaacctgaagagtactcc
tctttgtgtgaactagcggcttctgaacaaaagtctttgacctatgatgcttttacacct
aagccagcggagaacgccccggccctctccctgcaagacacgccaggttcagcagaagaa
atggcaaacgcagccgagaaagagagtgccactcctccttcgcacttatctgatcagtcc
gttatcctcttgggcccagccgttggcacagagacaaaagtgaaaagttggtttgaatct
tccctgcaccacttgaagcctgaggaggaggtggcgggaagtgaaaacgcccttccagat
aaggcagagacgctggcagcttcgctggtgactaaccaagcctctcttgagcaggtgcca
ataacctcagaaccaacatctaggggcaagagccttcgcagtaagaaggtccactgcagg
ctgtcgggaggtgaggaacccgtccaaccaatgtcaagcccatgcacgggcaaccaggca
gctggcatggtggccagcaaatgcccaggtccaaacaacctgattgaaatgccaagtaag
agcgcccatggccaaactccccggtttccagcagaaggcttgccagcgaggatgtgtacc
cgctcgttcactgcgttgactgagcccaggatgccagatcctttggaaggtgcaaaggcc
tcaaacccccaagagaagtcaggcaagaagacagtgtgcgtcctgaagcagagagccgct
ttcaaagctaggaaggccaatggcaaaccttctccaaagcccagcaactctgcttcccct
ccggtctcaaacttggcacagagcgaagactctggtcacaaggcgaaagaagccgacggc
attgaaacagaagcaaaagaccagcagtccatgatccttcgttccaggaccaggacccag
gaggtcttctacagcaagcggaggagagagaagagcgccatggatgcagggctcaaggag
ggcaagccacccaagaaggttctgccaaacaaccacttccccggttccttcaaggtcagc
ccccaaagcaggtctgagagggaaaggaaaaggctggccctcccgaaagccaggcccgga
atgggtggcaagatgtccgagcagccgctccacagcctgaagaggaagtcggccttcatc
ccaccggttcctgcgaaaaagaggaacttggtcctgaggagcaacagtcacagcggcagc
aacgtgaaggatgagaagccggaagcttctgccagcctgttcaagaggatgccgctggcc
aaaaaggcgaaggctaagctgtcccctaagaactcctgcgaagtggtgctcaagtcccct
caggtgaaggagaaccccgacgtctgcatcaagatcacctctcgggccgccttccaggga
gcgatgaagacaaaagtgcttcctccacggaaaggccggggcctgaagctggaagccatc
gtccagaagatcacctctcccaacctgaaaaagtttgcctgccgaacagccaccgtctcc
ttcaccgtccctgccgccacctcccacagtaatcccctcagcccgtccctgccaccggag
agggagcaggcctcaaagaatgcaggcgcagccccagcggcgggggaagccaggccatta
aaccaggccttgtcacaaaaggctcccgccgctccagcagccgagcaattatgcagaagc
ccgaacaacagatccttcagaggaaaactaatgaacagtaagaaactgtcctccaactgt
ttcaagggtgaggcctattcatctcccgagacgttgcagcacagcggtgacggcatggct
gccagcggcaccggcctgctgcccaagaagaggaaccgaaaagggaaagtggcggccttc
cgaacggccaaaaatagcctggagaagtgccctcacctgagccccgctctgctttttgca
tccagagaaaaggcggtggctgcagcggcggcagcagcagggaaaggcgaggagggacaa
agggaggcgaagaagccaaaggccgaggacaaaggctttagcagcgccgagagctctgag
gggaggtcctcgcaggcccagaccagggcccagaagcagcgggccaaccattccaactac
aacggctacaccaagagacaaaggaagcggctcagccgccgcaaggcccccagcgtgccc
tcgaggtgcaagagcaggaccaagaggcggcacccgcaacaggctcccctgctgagcccg
gccgagcccgaaatccggcttaagtatgtgtcatgcaagcggctgcggtcggacagccgg
gcgccccccttctcgccgtacgtccgggtggagaagcaggacgagttcgtcaccacctgc
actgtcgtcaactctcccgccgaagaggcccggctgcacaatagcgagcgctcctcctcg
tctccatctgcccaggccgggctttcgggggccgcatccctccagcagccgcgggccacc
ctgcctctgtcgtccaccatgcacctcggcccagtggtctccaaggccctcaacaccacc
tgcctggtctgctgcctgtgccggaacccggccaactacaaggaccagggagacctctgc
gggccgtactaccccgaggactgccttccgaagaagaagtcgcggctgaaagagaagatc
aaagtggaggggctgggcgaggagcctccgtctccggcggaaaggctgctcaaagcgaca
gataataattgtgcaactagtacgccgggtggaaagccgccaaggttggacagtggcgct
gactcagcgaaacagagcgctctccgctccagttcgagggggatgtttaggaaactacaa
agctgttactgctgcgatgagaggacagagggagaggaggcggcggtggcggcggcagca
gccgcagccgccgagaagcccaggaggcacgaatgcggcaaagtggagcagccacctccg
gaccctgccggggacacgcaggagcactgggtccatgaggcctgcgctgtgtggacagct
ggggtttacctggtggcgggaaagctctatggactgcaggaggcaataaagatggctgct
gatgtgagatgctccagttgtcagcaagtaggagcaaccattggctgctgccataagggg
tgtgcccaaacctttcactacatatgtgccattgatacaggttgtttgttaagtgaagag
accttcttgctgaactgccctagacataagaagcagccgttgtaa
DBGET
integrated database retrieval system
