Podarcis raffonei (Aeolian wall lizard): 128402329
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Entry
128402329 CDS
T09310
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
praf03021
]
128402329 (SUPT6H)
03036 Chromosome and associated proteins [BR:
praf03036
]
128402329 (SUPT6H)
Transcription machinery [BR:
praf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
128402329 (SUPT6H)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
128402329 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
MJ0788
Tex_N
Motif
Other DBs
NCBI-GeneID:
128402329
NCBI-ProteinID:
XP_053222292
LinkDB
All DBs
Position
15:complement(77279..118504)
Genome browser
AA seq
1724 aa
AA seq
DB search
MSDFVESEAEESEEEYDEDGEVVTRPPKKFVEDEDEEEEENLDDQDEQGNLKGFINDDDD
EEEEEEEEASDSGDSEDDVGRKKRKRNFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKMS
DDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEDGGEGGEGPVAAAEEEEEEEEDESDIDDF
IVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEDEYDYEP
EETEGEIRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRSIH
VKNAEDDELEEEADWIYRNAFAMPTISLQESADYLDRGQASSSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELRDVYNHFLLYYGRDIPKMQNAAKA
SRKKHKRVREDGEEEDGEGEDVEDEEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGACYMVALQIAREPLVR
QVLRQTFQERAKINVAPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAKDEG
LLTIDICIDMKGVEGYGNDQSYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYV
QMAMELKNKLLVEAKEFVIKACSRKLHNWLKAAPYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLSK
KPHVVTIAGENRDAQMLIEDVKRIAHELDQGQQLSSIGVELVDNELATLYMNSKKSETEF
RDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNSLHCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRSPYRS
PNSEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKSNEWKLPKDTYYDFDAEASDHKQEEEYKKRQQRT
TYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDNIYQHVDV
REEGKENAFSLGATLWINQEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCNGGDRKKL
EELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRSHIFPT
VNGLFRWFKDHYQDPVPGVTPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLLTPSYSY
TTPSQPITTPQYHQLQASTTPQSTQSQPQSQPSSSSAQRQQPKSSSHTAIDWGKMAEQWL
QEKEAERRKQKQRLTPRPSPSPMIESTPMSVAGDATPLLDEMDR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgtggagagcgaggctgaggagtccgaggaggagtacgacgaagatggg
gaagtcgtcaccaggccacccaagaagttcgttgaggatgaagacgaggaggaggaggaa
aaccttgatgaccaggacgagcaggggaacttgaaagggttcatcaatgatgatgacgat
gaggaagaggaggaggaggaagaagccagtgattccggagactctgaggacgatgttggt
cgtaaaaagaggaagcggaattttgatgaccgtcttgaggacgacgactttgacctcatt
gaagaaaacttgggtgtcaaagttaaacggcaaaaattcaggcgggtgaggaagatgtca
gatgacgaggatgacgaagaagaggattatgggaaggaggagcacgagaaggaagccatt
gctgaagagatcttccaggatggggagggcgaggatgggggagagggcggcgaaggccct
gttgccgcagccgaggaagaagaggaagaggaggaagatgaatctgacatcgatgacttc
attgtggatgacgatgggcagcctctgaagaagcccaagtggaggaagaagctccccgga
tacacagacgctgctttgcaagaggctcaggagatattcggagtggactttgactatgac
gagttcgagaagtacaacgagtacgacgaagagatggaagacgagtacgactacgagccc
gaagagacagaaggggagatccgtgtccggcccaagaagacggccaagaagcgcgtcagc
cgccgcagcattttcgagatgtatgagcccagcgaactggagagcagccacctgactgac
caggacaacgagatccgggtgactgacatgcccgagaggttccagctgcgctccatccat
gtgaagaatgccgaagatgacgagctggaagaggaagccgactggatctaccggaatgct
tttgccatgcccaccatctccctgcaggagagtgccgactacctggaccgcggccaggcc
agcagcagcttcagccgcaagggccccagcaccatccagaagatcaaagaggccctgaac
ttcatgaggaaccaacactttgaggtcccgttcatcgccttctacaggaaggagtacgta
gagccagaactgcacatcaatgacctgtggcgagtctggcagtgggacgagaagtggacc
cagctgaagatccgtaagcagaacctgaccaggctctttgagaagatgcaagcctaccag
tacgagcagatctctgcggatccagacaagcctctggcagacggcatcagagccctggac
accactgacatggagaggctgaaggatgtgcagtccatggatgagctgcgggatgtgtac
aaccacttcctgctctactatggccgagatatccccaagatgcagaacgccgccaaggca
agccgcaagaagcacaagagggtccgggaggacggcgaggaggaggatggcgaaggggag
gacgtggaggacgaagagcagaaggggccggagctcaagcaggcgtctcgacgggacatg
tataccatctgccaagcggctggcctagatggcctagccaagaagtttgggctgaccccc
gagcagtttggggagaacttgcgagacagttaccagcgccacgagacagagcagttccca
gctgagcccttggagctggccaaggattacgtctgcagccagttccccaccccggaggcc
gtgctggaaggggcctgctacatggtggccctgcagattgcccgcgagcccttggtccgg
caggtcctgcgccagaccttccaggaaagggcaaagatcaacgtcgctcctaccaagaaa
gggaagaaggatgtggacgaggcccattacgcctactccttcaagtacctgaagaacaag
cctgtgaaggaactgcgggatgaccagtttctgaagatctgcctggccaaggacgagggg
ctcctgaccattgacatctgtatcgacatgaagggcgttgagggctacggcaacgaccag
tcctacttcgaggagatcaagcaattctactaccgcgatgagttcagtcaccaggtgcag
gagtggaaccggcagcgcaccttggccattgagcgggcgctcaaccagttcctctacgtc
cagatggccatggagctgaagaacaagctgctggtggaagccaaggagttcgtcatcaag
gcttgcagccggaagctgcacaactggctgaaggcggctccttaccggccagaccagcag
gtggaggaagacgacgacttcatggacgagaaccaggggaagggcatccgggtgctgggc
atcgccttctcctcagccagagaccaccctgtcttttgcgccctggtgaatggggaaggg
gaggtgacggatttcctgcgcctgccgcatttcaccaagcgaaggaacgcctggcgggag
gaggagagagagaagaaggctcaggatatcgagaccctgaagaaattcctgctcagcaag
aagccccacgtggtcaccattgcaggagagaacagggatgcccagatgctgatagaggac
gtgaagcgcattgcccacgagctggaccaagggcagcagctctcctccattggggtggag
ctggtggacaatgagctggccactctctacatgaacagcaagaagtccgagaccgaattc
cgggattacccccctgtcctgcgccaggccgtctccctcgcccgccgcatccaggacccc
ctgattgagtttgctcaggtctgcagctccgacgaggacatcctctgcctcaagctgcac
cctctgcaggagcacgtggtgaaggaggagctgctgaactccctgcactgcgagttcatc
aaccgtgtgaacgaggtcggggtggacgtcaaccgggccatcgctcacccgcacagccag
gccctcctgcagtacgtctgtggcctggggccccgcaagggcactcacctgctgaagatc
ctgaagcagaacaacacccggctggagaaccggacccagctggtcaccatgtgccacatg
gggcctaaagtcttcatcaactgtgccggcttcatcaagattgacacagcatcgctgggc
gacagcacggactcctacatcgaggtcttggacgggtccagggtccacccagagacctac
gagtgggcccggaagatggctgttgacgccctggagtatgacgagtcggctgaggatgcc
aacccggctggagctctggaggagatcctggaaaacccagagcgcctgaaggacctggat
ctggatgcctttgctgaagagctggagagacagggctacggggacaagcacatcaccctg
tatgacatccgagccgagctgagctgccgctacaaggacctgaggagcccctaccgctcc
cccaactcggaagaggtcttcaacatgctgacgaaggagacacccgagacgttctatata
ggtaaactcatcatctgcaatgtgacggggatagcccaccggcggccccagggggagagc
tacgaccaggcgatccggaacgacgagacgggcctgtggcagtgccccttctgccagcag
gacaacttccccgagctcagcgaggtctggaaccactttgacagcggctcttgccccggc
caggccatcggggtgaagacacggctggacaacggcgtcacgggcttcatcccgactaag
ttcctcagcgacaaggtggtcaagcggccagaggagagggtcaaggtggggatgaccgtc
cactgcaggatcatgaagatcgacattgagaagttcagcgctgacctgacctgccggacg
tcggacttgatggacaagagcaacgagtggaagcttcccaaggacacctactacgacttt
gatgccgaggccagtgaccacaagcaggaggaggagtacaagaagaggcagcaacgcacc
acgtacatcaagcgtgtgatagcccacccctccttccacaacatcaacttcaagcaggca
gagaagatgatggagaccatggaccagggagatgtcatcatccgccccagcagcaaagga
gagaaccacctgacggtcacctggaaagtcagcgacaacatctaccagcacgtggacgtc
cgcgaggagggcaaggagaacgccttcagcctgggggccaccctctggatcaaccaagag
gagtttgaggacctggatgagatcgttgcccgctatgtgcagccgatggcgtccttcgcc
agagacctgctcagccacaaatactaccaggattgcaacgggggagacaggaagaaactg
gaggagctcctgatcaagaccaagaaggagaagcccaccttcatcccctacttcatctgc
gcctgcaaagaacttccgggcaaattcctgctgggctaccagccacggggcaagcccagg
attgagtatgtgacggttacgcccgaaggcttccggtaccgcagccacatctttcccacg
gtcaatgggcttttccgatggttcaaggatcactatcaggatcctgtgccaggagtcacc
cccagcagcagcagcaggaccaggactccggcttccatcaacgcgactcctgcaaacatc
aacctggcagacctgacccgagcggtgaatgccctgccacagaacatgacctcgcagatg
ttcagcgccatcgcggccgtgacgggccaggggcagaaccccaacgccacccctgcgcag
tgggcctccagccagtacggctacggaggcagtggcggcgggagcagcgcttaccacgtc
ttcacgactcctgcccagcagccggtggccaccccgcttctgacccccagctactcctac
acgacccccagccagcccatcaccaccccccagtaccaccagctccaggccagcaccacg
ccccagtccacccagtctcagccccagtcccagccgtcctccagctcagcacagaggcag
caacccaagtccagcagccacacggccatcgactggggcaagatggcggagcagtggctg
caggagaaggaggctgagcggaggaagcagaagcagcggctgaccccccgcccctcgccc
agccccatgatcgagagcacgcccatgtcggtcgccggagacgccaccccgctgctagat
gagatggaccggtag
DBGET
integrated database retrieval system
