Podarcis raffonei (Aeolian wall lizard): 128402447
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Entry
128402447 CDS
T09310
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03030
DNA replication
praf03420
Nucleotide excision repair
praf03430
Mismatch repair
praf03440
Homologous recombination
praf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128402447 (RPA1)
03420 Nucleotide excision repair
128402447 (RPA1)
03430 Mismatch repair
128402447 (RPA1)
03440 Homologous recombination
128402447 (RPA1)
03460 Fanconi anemia pathway
128402447 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
praf03000
]
128402447 (RPA1)
03032 DNA replication proteins [BR:
praf03032
]
128402447 (RPA1)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128402447 (RPA1)
Transcription factors [BR:
praf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128402447 (RPA1)
DNA replication proteins [BR:
praf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128402447 (RPA1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128402447 (RPA1)
MMR (mismatch excision repair)
128402447 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
128402447 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
128402447
NCBI-ProteinID:
XP_053222541
LinkDB
All DBs
Position
15:complement(773451..811299)
Genome browser
AA seq
623 aa
AA seq
DB search
MAARLSEGAIAAMMQGENVNNPVLQLITIRAISTGTGPQRYRMLMSDGVQTLSSFMLATQ
LNDLVNDQGLSANAICKINRFIINVLKDGRKVVIVMDLEVLQTADMVAGKIGNPVQYTEG
TLQAGQQQSSGSLATNQAPSRPAHPNESTVAAATAAGSASKYITPSKVPGKAGSSSFLST
PGGSQTKVVPIASLNPYQSRWTICARVTQKGQVRAWSNSRGEGKLFSIELVDESGEIRAT
AFNEQVDKFFPLIELNKVYYFSKGHLKTANKQYTTVKNDYEITFSNETSVVACDEAQHLP
SVKFDFIPIGDLESADRDALVDVIGICKSCEDLTKITIKSSNREVLKRVVHLMDMTGKGV
NVTLWGNDAENFDGSKQPVVAIKGVKVSDFGGRTLSVVSSSSILINPDIPESFKLRGWFD
SEGQLLESTSISGTRTGPMGGADTNWKSLHEAKSENLGQGDKADYFSCLATVVYLRKENC
MYQACPSPDCNKKLVDLQNGLYRCEKCDREFSNFKYRMILSVNIADFQDNLWLTCFQDSA
ETILGQNTAFLGELKEKNENAFDEVLQKASFTTHVFRVRVKQETFNDESRLKATAVDVKP
VNHQEYSRRLIGTIRKNAAQLGC
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggctcagcgagggggccatcgcggccatgatgcaaggagagaatgttaat
aatcccgtcttgcagctcattaccatccgagctatctccactggaaccggcccacagcgt
taccggatgctgatgagtgatggcgtgcaaaccctttcctctttcatgctggcaacacag
ctgaacgacctggttaatgaccagggcttgagtgcgaatgccatctgcaagattaacagg
ttcatcattaacgtcctgaaggatggaaggaaggtggtcattgtgatggatttagaagtc
ctccagacggctgacatggtggcggggaagataggcaatccagtgcagtacactgaaggc
actttgcaagcagggcagcagcagagctctgggagcctggcaaccaaccaagcccctagc
aggccagcacatccgaatgagagcacagtcgcagcagccacagcagcagggtctgcgtca
aaatacatcactccttcaaaggtgcctgggaaggcaggcagctccagcttcctgagcacc
cctgggggctcccagaccaaagtggtgcccattgccagtctgaacccgtaccagtccagg
tggacaatttgcgcccgggtgactcagaagggccaggtccgtgcatggagcaactcacgt
ggggaagggaagcttttctccatcgaattggttgatgaaagtggtgagatcagagcaacg
gccttcaatgaacaagtggacaagtttttccccctcattgagttgaacaaggtctattac
ttctcaaagggccacctgaagacggccaacaagcagtacacgaccgtgaagaacgactac
gagatcacgttctcgaacgagacgtccgtcgtcgcctgcgatgaagcgcagcacctcccc
tctgtgaagtttgacttcatccccattggcgacctggagagcgcagacagagacgccctt
gtggatgtaattgggatctgcaagagctgcgaggacctcacgaaaatcaccataaagtct
tccaatcgagaggtgttgaagagagtggtgcacttgatggacatgactgggaaaggagtg
aacgtcactctgtggggaaacgacgcagagaactttgacggctctaagcagcctgtggta
gccatcaagggagtcaaagtctcggattttggtggccggactctctctgttgtttcatcg
agcagcatcctcatcaaccctgacatcccagagtccttcaagctgcgtggatggtttgac
tctgaagggcagctcctggagtccacctccatctcaggcacaaggactgggcccatggga
ggtgcagacaccaactggaagagtctgcatgaggccaaatctgagaacctggggcaagga
gataaggcagactacttcagctgcttggccacagtggtgtacctacgcaaggagaactgc
atgtaccaggcctgcccatccccggactgcaacaagaagctggtcgacctgcagaacggg
ctgtaccgctgcgagaaatgtgaccgggagttctccaacttcaagtaccgcatgatcctc
tcggtcaacattgctgatttccaggacaatttgtggttgacttgtttccaggattcggca
gagaccatccttgggcagaatacagccttcctgggagaactgaaggaaaagaatgaaaac
gcgtttgatgaggtgctccagaaagccagcttcaccacccatgtattccgggtcagagtc
aagcaagagactttcaacgacgaatcgcgcctgaaggcgacagcagtggatgtcaagcct
gtcaaccaccaggagtacagcaggaggctgatcgggaccatcaggaagaatgctgcccag
ctgggatgctga
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