Podarcis raffonei (Aeolian wall lizard): 128402525
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Entry
128402525 CDS
T09310
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128402525 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128402525 (RNF43)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128402525 (RNF43)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128402525 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
128402525
NCBI-ProteinID:
XP_053222682
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All DBs
Position
15:14895858..14953905
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AA seq
807 aa
AA seq
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MSVGPQLQLAVLWPWLLMATLQIRLGYSGLALVAAMEAERSLAQKAIIRVIPLKLEPLTL
EGVFASVAEVTPAEGKLLQFHPLSLCNTSEDEHTVPGFVSIVKLERPDRDPHPCLSLANK
AKLAGERGARAVLFDITDDQSAVDQLRNPRGLSHPVVLIWGHDAELLMGVVNNNREAHVK
IEVKEMAAWPDYDVWILLTVMSTVLVIVLIFIVRTRCQPSRDRTNAQEETLQAINQLATR
RYQARCRQAPTGDSVSTCSSAPVCAICLEEFAEGQELRIITCFHEFHRHCVDRWLLERQT
CPLCMFNIIDRDPSALPRHSHEDPHNSGPGQRPRFFRQHPGRALYHFPRTVPQMPPGSCS
STLPHGHPFFHSPELSQLDLGTMHYLPYRPVGFEPPWCSRQPSLTRGLLVPQRQDSLGCE
PGLPSHRTCLLQHQPSCRGLRGPLVAKPSRAIPPHRGIRHGRHHHHHSSGSGESYLTEPS
GYLPDGPGSDSSSGPCHGSSSDSMLNCTDVSLQAIHGSCSTFRSSLSSDYDPFAFCGSEK
SAAESCPATSPPWRDPRPPPADSVTAGRPPVASSHVHYHHHLHRHHHYGRCPPDCANGQE
PSSRKAKPPRAKTGSHGAQAQRRTEKMPSPEGGSASLEASSARQSTCLPQGQPEFSTADR
SNLKAADSGAIGPWTSQKHCLQIHPSRRRWKCPLKASPSSLPEDSNVPPVCSVPNPPGPA
SGSCSSSAEVQPLLETGPSGHHFATSSHSATEPQEQADRLECKAMCPGEYPRLDTMGNDA
SFYLSCQILQELQGSKDDIPDVYEHSV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttggcccccagctacagctggcagtcctctggccttggctgctaatggctacg
ctgcagatacgcttgggctactcaggactggctctggtggcggccatggaagccgagcgc
tctttggcccagaaggcaatcatccgggtgatccctctgaagctggagcccctcacactg
gaaggagtcttcgcaagtgtggccgaggtcaccccagctgaagggaaactgctgcagttc
caccccctgtctctgtgcaacaccagcgaggatgagcacacggtcccaggatttgtctcc
attgtcaaactggaacggcctgaccgcgatccccacccctgcctgtccttggccaacaag
gccaagctggcgggagagagaggagctcgcgccgtcctctttgacattacggatgaccaa
agtgctgtcgaccagctgagaaatcctcgagggctcagtcaccccgttgttttgatttgg
ggccacgacgccgagctgctgatgggcgtggtgaacaacaaccgagaagcccacgtgaag
attgaggtgaaggagatggcggcctggcccgactatgatgtctggatactcctcaccgtc
atgagcaccgttctggtgatcgttttaatcttcattgtccgtactcgttgtcagccaagc
agagatcggactaacgcgcaggaagagaccctgcaagccatcaaccagctggccacgcgg
aggtatcaagcccgctgccggcaagcccccacgggggactctgtcagcacctgcagctcg
gcccccgtctgcgccatctgcctggaggagttcgccgagggccaggaactccgcatcatc
acctgcttccatgagttccaccggcactgcgttgaccgctggctcctcgagcgccaaacg
tgtccactgtgcatgttcaacatcattgaccgggatccttccgccttgcccaggcattcc
cacgaggacccccataactcaggaccagggcagaggccccgcttcttccggcaacaccct
gggcgtgccttgtaccacttcccgcggacggtccctcaaatgccccctggaagctgctct
tcgacgctcccccacggacaccctttcttccactccccggagctctcccagctggatttg
gggaccatgcattacttgccctatcggccggtgggctttgagcctccttggtgtagccgc
cagccctccctcacccgaggcctgctggttcctcagcgccaggactctctgggctgtgag
ccgggcctgccctcccaccggacctgcctgctgcagcaccagccttcctgccgaggcctc
cgggggcccctcgtggccaaacccagccgtgccattcctccgcaccggggtatccgccac
gggcggcatcatcaccaccacagcagtggctccggggagagttacctcacggagcccagt
ggctacctccctgacggacccgggagtgactccagctcaggtccttgccatggatcctcc
agtgattccatgctgaattgcacggacgtcagcctccaggccatccacggaagctgctcc
actttccgcagctccctgagcagcgattacgacccatttgccttctgtggctctgagaag
tcagccgcagaaagctgccccgcgacctctccgccgtggagggacccacggcctccgccg
gcggactcggtgacagcaggccggccgccagtggccagtagccatgtccattaccaccac
cacctccacaggcaccaccattacggacgctgccccccagactgtgccaatggccaagaa
cccagttcgcggaaggcaaaacctccaagggccaagacaggatctcatggcgcccaggcg
caaagacggacagagaaaatgccttcgccagaagggggatctgcctccctggaggcctct
tcagccagacagtccacttgcttgccgcaaggacagccagagttttccacagcagacagg
tcaaacctcaaagcagcagacagtggtgccattgggccatggacgtctcagaaacactgt
ttgcaaatccatcccagtagaaggagatggaaatgccccctcaaggcttccccatcctct
ttgcctgaagactcaaatgtgccccctgtctgcagcgttcccaaccctcctggtcctgct
tctggaagctgctcctcctctgcagaggtccagcctctcttagaaactggtccctccggg
catcattttgcaacctcgtcacactcggccacggagcctcaggagcaggcggacaggctg
gaatgcaaggccatgtgtcctggggaatatccgaggctggacaccatgggaaatgatgcc
agcttttacctcagctgccaaattctgcaagagcttcaggggtctaaagacgatatccca
gatgtttatgaacattcggtttga
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