Podarcis raffonei (Aeolian wall lizard): 128402725
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Entry
128402725 CDS
T09310
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128402725 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
praf04040
]
128402725 (TRPV1)
Ion channels [BR:
praf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128402725 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
128402725
NCBI-ProteinID:
XP_053223045
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Position
15:3132195..3154908
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AA seq
853 aa
AA seq
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MSGILGKMRKLGSSDQEDSESMDDHLEGEESGACTPGSNRSTKHSIFAKRARFGIGDGDK
DTAPMDSFYQMDNMVSSPILKFSLSLERGRCGNHSPKLLHRGARRGASMGVRPEKSFRIY
DRRRLFDAVAQGDPSELDDLLTYLLETLKNLTDEEFKEPDTGKTCLLKAMLNLHNGRNDT
IPLLLEIAEKTDNLKEFVNAEYTDSYYKGQTALHIAIERRNMYLVDLLVRNGADVHAKAH
GEFFQKISGRPGFYFGELPLSLAACTNQLNIVKYLLDNPYHPANIAAQDSIGNTVLHALV
EIADNTEDNTKFVTKMYNDILILGARLNPTLKLEDIANRRGLTPLTLAAKTGKIQVFAYI
LRREIKEPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHEML
LVEPLNQLLQDKWDRFVKHLFYFNFFIYAAHIVILTVAAYYRPTKKHGEPPFAFNYTTNE
YFRVTGEILSVLGGAYFFFRGIKYFKQRQPSLKAIFTNSYSELLFFIHSVLILGSAILYF
SKQELYVILMVFALALGWTNLLYYTRGFQQMGIYSVMLEKMMLRDLCRFIVVYLLFHLGF
STAVVTLIEDDDELLAQNQTHSTCQAKCRPSYNNFYSTCLELFKFTIGMGDLEFTDSYHF
RSVFIILLVTYVIVTYILLLNMLIALMGETVNKISQESKSIWKLQRAITILNIENSYWNC
IVNSFRSGKQVLVGTTPDGKNDYRWCFRVDEVNWSTWNTNLGIINEDPGGYSEELKRNLS
FSFKYGRVSGKNWKTLVPIRRDGKREGSLKPISEDGADSEEQGPRKKSLPKFVHFFWSLI
IFCKVFNSRSDGP
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcctggggaaaatgcggaagttggggagctccgaccaggaggattcggaa
tcgatggatgaccacttggaaggcgaggagtcgggggcttgcacacccggcagcaacagg
tcgaccaagcacagcatcttcgccaagcgggcgcggtttgggattggggacggagacaag
gacacagctcccatggattccttctaccagatggacaacatggtgtccagccccatcctg
aagttcagcctcagcttggagcgagggaggtgtggcaaccactctccaaaacttctccat
cgcggggctcgccgaggagcctccatgggcgtgcgccccgagaaatcgttcaggatctac
gaccgaaggaggctctttgacgcggtggcccagggggatccgagcgagctggacgacctg
ctcacctacctcctggagaccctgaaaaacctgacggatgaggagttcaaagaaccagat
actgggaagacatgcttgctgaaagccatgctgaacctccacaatggccggaatgacacc
atccctctcctgctggagattgcagagaagacggacaacctgaaggagtttgtgaatgcc
gagtacacagacagctactacaagggccaaaccgcgctgcacattgccatcgagagacga
aacatgtaccttgtggacctcctggtcaggaacggcgccgacgtccacgcgaaagcccat
ggggagttcttccagaaaatcagcggcagacccgggttttattttggtgagctgcctctc
tctttggctgcctgcacaaaccagctcaacatcgtgaagtaccttctcgataacccctac
cacccagccaacattgccgcccaggattccataggcaacaccgtcctccacgctttggtg
gagatcgccgacaacacggaggacaacaccaagtttgtcaccaagatgtacaacgacatc
ctcatcctgggagccaggctcaaccccaccctcaagctagaagacatcgccaaccgaagg
gggctgacaccgctgaccctggcagccaagactgggaaaatccaggtctttgcgtacatc
ctcagacgggagatcaaggagccggagtgtcgccacctgtcccggaagttcacggaatgg
gcttatgggcctgttcactcatcactctacgacctgtccagcatcgacacctgcgagaag
aactcggtcctggagatcatcgcttacagcagtgagacgccgaaccggcacgagatgctg
ttggtggagcctctcaaccagctcctgcaggacaagtgggaccgattcgtcaagcacctc
ttctacttcaacttcttcatttacgctgcccacatcgtcatcctcaccgtcgccgcctat
tacaggccaacgaaaaagcacggggagcccccgttcgcctttaattacacgaccaacgag
tatttccgagtcaccggggagatcctgagtgtgttggggggtgcctatttcttcttcaga
gggatcaagtattttaagcagagacagccatccctgaaagcaatctttacgaacagctac
agtgaacttctcttcttcatccactctgtcctgatcctgggctcagcgatcctgtacttc
agcaagcaagaactctacgtcatcctcatggtcttcgccttggccctgggctggactaac
ctgctgtattacactcgtggcttccagcagatggggatttactcagtcatgctggagaag
atgatgctgagagacctgtgtcgtttcatcgtggtctacctccttttccatttgggcttt
tcgacagctgtcgtgaccctcattgaggacgacgatgagctgttggcacagaaccaaact
cacagtacctgtcaagcaaagtgccgcccctcctacaacaacttctactctacctgccta
gaacttttcaagttcacgattgggatgggagatttggagttcacagacagttaccacttc
aggtcagtcttcatcatcctgctggtgacttacgtcatagtcacgtacatcctcctcctc
aacatgctcatcgccctgatgggagaaacggtcaacaagatttctcaggagagcaaaagc
atttggaagcttcagagagccatcaccatcttgaacatcgagaacagctattggaactgc
attgtcaactccttccgatctgggaaacaagttttggtggggactactccggacgggaaa
aacgattaccgttggtgctttagggtggatgaggtgaactggtccacatggaacaccaat
ctgggcatcatcaacgaagaccctggtggatacagcgaggagctgaaacggaacctgagc
ttttctttcaaatatgggagagtttcagggaaaaactggaagactttggtcccgatccgg
agagatggaaaacgagaagggtcgctcaagcccatttcggaagacggcgcggattcagaa
gagcaaggcccccggaagaagtctctccccaagtttgtccactttttttggtctctcatc
atcttctgcaaggtttttaattctagaagcgacggcccataa
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