Podarcis raffonei (Aeolian wall lizard): 128402772
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Entry
128402772 CDS
T09310
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128402772 (TRIM50)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128402772 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-RING_4
zf-Nse
U-box
CCDC146_CC_N
OmpH
DUF16
Motif
Other DBs
NCBI-GeneID:
128402772
NCBI-ProteinID:
XP_053223126
LinkDB
All DBs
Position
15:complement(15999974..16006524)
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AA seq
494 aa
AA seq
DB search
MARKMSIDQLEDQLLCPICLEVFKEPLMLQCGHSYCKICVVALSVDLESQFLCPVCRKAV
DCSSSPPNVNLARIIEALHAAGSSDPNEESCPNHHNPLSLFCEQDQEVICGLCGTIGTHQ
HHKVTPISTIYSRMKEKLSAWMTEVQKQKGSLDEHVSRLMNNKTRIANESDVFKWVVRKQ
FQELHRYIDEEKARFLGRIEREAGQLIASIEVQVNQTADILQKLKELENSLEKLNNEGQL
DFIRKYRSLPSRSELPRQHLADGMFSAVSFKPDFHQDDIKMMVWKRLLRKVLPAPEMLKL
DPVSAHPILELSKGNTMVQCGVFFQRRGSNPDRFDYSNCILGNKGFSWGRHYWEVIVGLK
SHWRLGIVKATVSRKGKLNKSPEHGVWLIGLKEGKVYEAFNNPRVVLPLSARPQRIGVYL
HYEKGELTFYNADSPDELVPIYTFQAEFQGKLYPILDMCWHERGTNTLPIVLPTPTMLQV
QEDDGLNAQEPTKL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagatgagcatcgaccagctggaagaccagctgctctgccccatttgcctg
gaagtcttcaaagagcccctgatgctccagtgtgggcattcctactgcaagatctgcgtg
gtcgcgctttcagttgacctggagagccagttcctttgcccagtgtgccggaaggctgtg
gactgcagcagttccccacccaacgtcaacctggctcgtatcattgaggcgctgcatgct
gcaggcagctcagatcccaacgaagagtcctgccctaatcaccacaaccccctcagcctc
ttctgtgagcaagaccaggaggtgatctgtggtctctgtggcaccatcggcacccatcag
caccataaggtcacccccatctcgaccatctacagccggatgaaggagaagctctctgca
tggatgacggaggtgcagaagcagaaggggagcttggatgagcatgtcagcaggctgatg
aacaacaagacacgcattgcgaacgagtccgatgtcttcaaatgggtggtccggaagcag
ttccaggaactgcacaggtacatcgatgaggagaaggctaggttcctggggcggattgag
agggaggcaggccaacttatcgcctccatcgaagtccaggtgaatcagacggcagacatc
ttgcagaagctgaaggagctggagaattccctggagaaactcaacaacgaaggccagttg
gatttcataaggaaatacagatctcttccctccaggtctgagctcccccgccagcatctg
gctgatggtatgttcagcgcagtctcctttaagcctgacttccaccaagatgacatcaag
atgatggtgtggaagagactactacgcaaagtcctcccagctccagagatgctgaaactg
gacccagtgagtgcgcaccccatcctggagctgtccaagggaaacaccatggtccagtgt
ggggtgttcttccagaggcgaggcagcaaccctgaccgcttcgactacagcaactgcatc
ctgggtaacaagggcttctcctgggggaggcactactgggaggtgattgtgggcctcaag
agccactggcgtttgggcatcgtcaaagccacggtcagccgcaagggcaagctgaacaag
agccctgagcatggggtgtggctaatcggcctgaaggagggcaaggtctatgaggccttc
aacaacccacgtgtggtgctgccgctctcagcccgcccccagcgcatcggggtctacttg
cactacgagaagggtgagctgaccttctacaatgcagacagccctgacgaactggtacca
atttacacctttcaagcagagttccagggcaagctgtaccccatcctggacatgtgttgg
catgaacggggcaccaacacgttgcccattgtcctgcctacgcccaccatgctgcaggtc
caagaagatgatggcctcaatgcccaggagcccaccaagttgtaa
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