Podarcis raffonei (Aeolian wall lizard): 128402815
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Entry
128402815 CDS
T09310
Symbol
DDX25
Name
(RefSeq) ATP-dependent RNA helicase DDX25
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128402815 (DDX25)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128402815 (DDX25)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128402815 (DDX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
T6SS_FHA_C
Motif
Other DBs
NCBI-GeneID:
128402815
NCBI-ProteinID:
XP_053223183
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Position
15:complement(32488567..32513878)
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AA seq
623 aa
AA seq
DB search
MSLKHVSNQTREPRLGAEIKRTRGLSRTPTCTSNDPLRTPVSPPPPHFPCLHGNPGPAPP
GINIYQFPLSPAPFPAFTRGSRVSGPRAAAATPRTAGALRLPGGRMDQWAERRLGEMWPR
RSSLGKGQEASSRGVAESLPQKLPREVLTEARGDHPQLNRSLSCGKNLGCFPHRPVSESS
EGKSDADMKKLEDDDCDRVPAAETSLLNKLIRKSLVESYHHVEVLQRDPSSPLFSVKTFE
ELHLKDELLQGIYAMGFNRPSKIQETALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSR
VNPQDRFPQCLCLSPTFELALQTGRVIEKMGKFCVNIKVAFAIRGNRLPRGTVVEEQIVI
GTPGTLLDWCFKLNLLNPKKIKVCVLDEADVMIDKQNYSDQSVRIQRALDPGCQMLLFSA
TFEDPVLLFAQRIVPEPNVIKLRREELTLNNIRQYYFECENKEDKYKALCNIYGSITVGQ
AIIFCQTRKNAKWLHWALSNDGHQVSLLSGELSVEERADVIQKFRDGKDKVLITTNVCAR
GIDVKQVTIVVNFSLPTTTPWLPDYETYLHRIGRAGRFGKKGLAFNMVERHNLPLVYAIQ
DHFKTTIKCLDPEDMEALEKIDD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaaacacgtctctaaccagactagagagccccgcctcggggcagagatcaaa
cggacgcgcgggctttctagaacgcccacgtgcacatcaaacgacccccttagaacgccc
gtttcgcctccgcctcctcactttccctgtctccatggcaatcccggccccgccccgccg
ggtataaatatttaccagtttcccctctcccccgcccctttccctgccttcacgcgaggc
tcccgcgtctccgggcctcgtgctgctgcggcgacgcctcgcacggccggcgcgctgaga
ttgcccggcgggcggatggaccagtgggcagaacggcggctgggcgagatgtggccgagg
cggagcagcttggggaaggggcaggaagcgagttcccgcggggtcgccgaatctctgcct
cagaaattgcccagagaagtcctcacggaggcccgtggagatcatccccagctgaataga
tcgttatcctgcgggaaaaatcttgggtgttttccgcatcgccctgtttcagagagcagc
gaagggaagagcgatgcagatatgaaaaagttggaggatgatgattgcgaccgagtacct
gcagcagaaacttctctcttaaacaagctgattagaaaatctttagtggagtcctaccat
cacgtagaggttttacagcgtgatcccagctcaccgctgttttccgtgaaaacctttgag
gaactgcatttgaaagatgaactcttgcaaggcatctatgccatgggctttaacagacct
tccaagattcaagaaacggcacttccaatgatgttagctgacccaccccaaaatcttata
gcacaaagtcagtcggggacaggcaaaacagctgcttttgttctggctatgctgagcaga
gtgaacccacaggacagatttccacagtgtctctgcttgtctcccaccttcgagctggca
ttgcaaacggggcgagtgattgagaagatgggaaagttttgcgtcaacataaaggttgcg
tttgccattcgagggaacagacttccaagagggactgtagtggaagaacagatagtaatt
ggaaccccaggcaccctgctagattggtgtttcaagctaaaccttttgaatccaaagaag
atcaaagtatgtgtgctggatgaagcagatgtcatgatcgacaaacagaattactcagac
cagagtgtccgaattcagagagctttagaccccggttgtcagatgcttctcttttccgcc
acctttgaagaccctgtgctgctctttgcccagcgcatcgtccccgaacccaacgttatt
aagctccgccgagaggagctgaccctgaacaatatcaggcagtactactttgagtgtgag
aacaaggaggacaaatataaagccctgtgcaatatctatggcagcatcacagtcggccaa
gcaatcatcttttgtcagacgcgtaaaaatgccaaatggcttcactgggctctgtcgaat
gatgggcaccaagtatccctgttgagtggggagctctctgtcgaagagcgtgcagacgtg
atccagaagtttcgcgatgggaaagataaagtcctcatcacaaccaacgtctgcgccaga
ggcatcgacgtgaagcaggtcacgatcgttgtcaactttagcctgcctacaaccacgccc
tggctgccggactacgagacctacctgcaccgcataggccgagcaggtcgctttggaaag
aagggtctggccttcaatatggtcgaaaggcataatctaccgcttgtctatgcaattcaa
gaccatttcaagactaccatcaagtgcctcgatccagaggatatggaagcactggaaaaa
atagacgactga
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