Podarcis raffonei (Aeolian wall lizard): 128402999
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Entry
128402999 CDS
T09310
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
praf03009
]
128402999 (DDX52)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128402999 (DDX52)
Ribosome biogenesis [BR:
praf03009
]
Eukaryotic type
90S particles
Helicases
128402999 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128402999
NCBI-ProteinID:
XP_053223518
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Position
15:complement(7107488..7120352)
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AA seq
634 aa
AA seq
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MDSHELFRKLGAGAKFDVKRFRRDAERFKVIRTKDKEAGALEILGELDFFANQSKKPPNP
SEDGGGGNCLREPQVEALESQPENKGNEPRLVGKARAAEKRKGDGQSMEGRGKKKKAQEA
APINLVTENEGILWMSTLEAKLSAPRSKGEKEPPAAKLEQARQEKVNHFRNKHKIYIQGT
DLPEPIATFEQLAKEYNVHQKIMQNIEAAGFQTPTPIQMQAIPVMLHGRELLACAPTGSG
KTLAFGVPVLAHLKQPMNKGFRALIISPTRELANQTHRELLKLSEGIGFRIHMIHKAAEA
AKKFGPKSSQKFDILVTTPNRLVYLLKQDPPAIDLTRVEWLVVDESDKLFEDGKTGFRDQ
LATIFLACTSHIVKRAMFSATFAHDVEQWCKLNLDNIVSVSIGARNAAAETVDQELLFVG
SETGKLLAMRGLVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQRDSV
VHSFRAGKIWVLICTALLARGIDFKGVNMVINFDFPSSAVEYIHRIGRTGRAGHTGKAIT
FFTEDDKPLLRSIASVIQRAGCPVPDYIKHFRKLQSKQKKKLIKKPLEREHILTSPQFLR
RKAKRKKRIAQKGVKKDFKEAKTENSQAQTVPEN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcacgagctcttccgaaagctcggagccggcgccaagttcgacgtgaagcgc
ttcaggagagacgcggagcgattcaaggtgatcagaactaaggataaagaagccggagca
ttggagattctgggagagcttgacttctttgctaaccaaagcaaaaaaccacccaatcct
tccgaagatggcggaggaggaaattgtcttcgtgaaccccaagttgaagcattggaatca
caacctgaaaataaaggaaatgaacccagattggtgggcaaggcaagggctgcagaaaag
agaaaaggagatgggcaaagcatggaagggaggggcaaaaagaaaaaggctcaagaggca
gcccccataaatcttgttactgaaaatgaggggatattgtggatgtccactttggaagca
aagctcagcgctccaaggagcaagggggagaaggagccccctgcagcaaaattggaacaa
gctagacaagaaaaggtaaatcacttcagaaataagcacaagatctacattcagggaaca
gatcttccggaacctattgctacgtttgagcaacttgcaaaggaatacaacgtccaccag
aagatcatgcagaacattgaagctgcagggttccagactcccacaccgattcagatgcag
gctattcctgtcatgctccatggtcgtgaacttctggcctgtgcccccactggttcaggg
aaaacattggctttcggcgttcctgttttagcacacctgaaacaacctatgaataaaggt
ttcagagcactgataatatcccctacgcgggaacttgccaatcagacacaccgagagctg
cttaagctgtcagaaggtatcggcttcagaatacacatgatccataaagctgctgaggct
gcgaaaaagtttgggccaaagtcatctcagaaatttgatattctggtgactactccgaac
agacttgtctatcttctgaaacaagaccctccagcaatagatttgaccagggttgagtgg
ctggtggtggacgagtcggacaagttatttgaagatgggaagacgggcttccgagaccag
ctcgccaccatcttcctggcgtgcacctcccacattgtcaagagagccatgttcagtgca
acgttcgcccacgacgtagagcagtggtgcaaactcaacctagacaacatagtgtctgtc
tctattggagcaaggaatgctgcggctgagacagtggatcaggagctcttgttcgttgga
tcggagacgggaaaactgctagcgatgaggggccttgtgaaaaagggcttcacaccacct
gtcttggtgtttgtccagtccattgaacgggcaaaagagcttttccacgagctcatttat
gaaggcatcaacgtggatgtcattcacgcagacaggacccaacagcagagagacagtgtc
gtccacagtttcagagcggggaagatttgggtccttatctgtactgctctgttggcaaga
ggcatcgacttcaaaggagtgaacatggttattaattttgacttcccgagtagcgctgtg
gaatacatccaccggatcggccgcacaggaagagcagggcacactggaaaagcaatcacc
ttcttcactgaagacgacaagccgttattgcgaagtattgccagtgtcattcagcgagct
ggctgtcctgtgccagactacataaaacatttccgcaagcttcaaagcaagcaaaagaag
aagttgattaagaagcctttggaaagggaacacattcttacatctccccagttcttacgc
cggaaagccaagagaaaaaagagaattgctcagaaaggagtgaagaaagatttcaaggaa
gccaaaactgaaaattctcaggcacagactgttccagaaaactga
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