Podarcis raffonei (Aeolian wall lizard): 128403007
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Entry
128403007 CDS
T09310
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
praf04515
]
128403007 (DSCAML1)
Cell adhesion molecules [BR:
praf04515
]
Immunoglobulin superfamily
DSCAM family
128403007 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
fn3_2
Adeno_E3_CR1
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
128403007
NCBI-ProteinID:
XP_053223526
LinkDB
All DBs
Position
15:29657208..29823789
Genome browser
AA seq
2060 aa
AA seq
DB search
MWLVTSCLLLLNSWTSPAHTEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSATLR
WYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIR
VKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITF
YGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDGFQSREAK
AGQLVELPCIASGYPNPAIRWIKGGRPLPADSRWTKRVTGLTISDLRVEDSGTYICEVTN
TFGSAEVTGTLTVIDPLHVTLTPKKLKTGIGSTVILSCTLLGSPEYTLRWYRNTELVAPD
DFISIRGINNETLLITAAQKSHSGAYQCFASRKAQTAQDFAIIVLEDGTPRIISSFSEKV
VNPGEQFSLMCAAKGAPPPTVTWALDDEPIQRDGSHRTNQYTMSDGTTVSHMNVTSPQIK
DGGVYRCAARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKW
YKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPL
IQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVILSGSGVTIESKEFMSSLQISS
VSLKHNGNYTCIATNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPP
PKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDIS
KSMFLTVKIPAMITSHPNTTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRNVRYA
IATKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREV
KARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVY
SIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGV
IRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
SEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGE
WGEMQNITTVRERAELRGMEKFTNYSVQVLAYTQAGDGVRSNVLHIQTKEDIPGPPAGIK
AVPSSSSSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRG
QQYMLWVAAVTSAGRGNMSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCHSVGEPA
PAVKWTKDSDDSAIPVAVDGHRQIQTNGTLILRSVKAEDSGYYTCTATNTWGFDTIIVNL
LVQVPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFITSTER
SFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFNKDQHLFTHINSTHARL
NLQGWNSGGCPILAVVLEYRPKGTWVWQSLRANYSNEVFLTELREATWYELRMKACNSAG
CGNETMQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFVVRKKRKE
KRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGDD
KATIPVTDTEFNQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAH
STRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSM
VSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSM
STPSEPGICRFTASPPKPQDSDRGKGVAVPIPHRANKSDYCNLPLYMKSETFFRKPDLHD
PCPVVPPREASIRNLARAYHTQARHLTLDPSSKALAVPHVSATTTTLPQRTLAMPGSASA
APPPPAAAAAAAAATTTATAPVAAPASSTEPAAAPSAEPRLPPHTKMGGSRDSLLEMSTS
GIGRSQKQGAGAYSKSYTLV
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtcacttcttgcctcctgctgctcaactcctggaccagcccagcgcataca
gaagatgttggaaccagcctctactttgtgaacgactccattcagcaggtgaccttctcc
agcactgtgggggtggtaatcccctgtccagcagcagggtcccccagtgccacccttcgc
tggtacctcgccactggggatgacatctatgatgtcccacacatccgtcacgtccatgcc
aatgggacgctgcagctctaccctttctcgccatctgccttcaatagctttatccacgac
aacgactatttctgtactgcagagaattctgcggggaaaatcaggagcccaaatatccgg
gttaaagcagttttcagggaaccttacacagtccgggtggaggatcaaaggtcaatgcgt
ggaaacgtggctgttttcaagtgcctcatcccttcttcggtgcaagaatacgtcagtgtt
gtgtcctgggagaaagacacggtttctatcatcccagaaaataggtttttcattactttc
tatggtgggttgtacatatcagacgtccagaaggaagatgccttgtccacctataggtgt
atcaccaagcacaagtacagtggcgagacgcggcagagcaatggagcccgactgtccgtc
tcagaccctgcagaatccatcccaaccatcctagatggcttccagtcccgtgaagcaaag
gcaggtcagctggtggaacttccatgcatagcctctggctaccctaacccagccatccga
tggatcaagggtggtcggccactgcctgctgacagccgatggaccaaacgtgtcactggg
ctgacgatcagtgacctgcgagtagaggacagcgggacgtacatctgtgaagtcacaaat
acctttgggtctgctgaggtcaccgggaccctcacagtgatagaccctctgcacgtcacc
ctcacaccaaagaagctgaagaccggcatcgggagcaccgtcatcctctcgtgcacgctc
ttgggctcaccagaatatactctccgctggtatcgcaacacagagctggtggcaccagat
gacttcatctccatccggggaatcaacaatgaaacgctgctcatcacagctgcccagaag
agccattcaggagcctatcaatgctttgccagcaggaaggctcaaactgctcaggacttt
gccatcattgtgctggaggatgggaccccccggatcatctcatccttcagtgaaaaggtg
gtgaacccaggcgaacagttctccttgatgtgcgctgccaagggggcccctccgcccacg
gtcacttgggcactggatgatgagcccattcagagggacggcagccaccgcaccaaccag
tacaccatgtcagatggcaccactgtcagccacatgaacgtgacaagcccgcagatcaag
gatggaggggtgtaccgttgtgccgcgcggaactcggtgggcagcgccgaataccaagcg
cgaataaacgtaagaggcccccccagcatccgcgcaatgaagaacattacagccgtggca
ggaagggacactttcatcaactgcagggtgattggctacccatattattccatcaaatgg
tacaaggactcactgctcctgcctgacaaccaccggcaagtggtctttgaaaatggcact
ctcaagcttatggatgtccagaaggggatggatgaaggggagtacctatgcagtgtcctc
attcagccacagctttcaatcagccagagtgtccatgtcactgtgaaagtcccgcctctc
atccagcccttcgaattccctccggcctccatcggccagctcctgtacatcccatgcgtg
gtctcctcgggtgacatgcccatccgcatcacgtggaggaaagacgggcaggtgatcctt
tccggctccggcgtcaccatcgagagcaaggagttcatgagctccctgcagatctccagc
gtctccctcaagcacaacggcaactacacttgcattgccaccaacgatgctgccaccgtc
agccgtgagcggcagctcattgttcgagtccctcctcgctttgttgtccaacccaacaat
caggatggaatctatggcaaagcaggggtgttgaactgctctgtggatggatacccccct
cccaaagtcatgtggaaacatgctaaaggcagtgggaacccccagcaataccacccagtc
cccctcaccggccgcatccagatcctgcccaacagctcactgctcattcgacatgtttta
gaagaggacatcggctattacctgtgccaggccagcaatggagtcggtacagacatcagc
aagtccatgttccttacggtgaaaatccctgccatgatcacctctcaccccaacaccacc
atcgccattaaggggcaggccaaagagctgaactgcacggcccgtggagagcggcccatc
atcatccgctgggagaaaggggacaccgtcatcgacccagatcgcaacgtccgatatgcc
atcgccaccaaggacaatggcgacgaggtcatctccacacttaaactcaaaccagctgac
cgcggggactccgttttcttctcctgccatgcaatcaactcgtatggtgaagacagaggt
ctcattcagctcactgtccaagagccaccagaccctcctgagttggagatccgggaggtg
aaggcccggagcatgaatttgcgctggacgcagaggttcgacggcaacagtatcatcacc
ggctttgatattgagtacaagaacaagtctgattcttgggattttaagcaatcaactcgc
aacatttccccaactattaaccaagccaacattgtggacctccacccggcttctgtttac
agcatccgcatgtactccttcaacaagattggccgcagcgaacccagcaaggagctgacc
attagcactgaggaagcagctccagatggtccccccatggatgtcaccttgcagcccatg
acatcccagagtatccaggtcacttggaaggcccctaagaaggaactccagaacggggtg
atccgcggctaccaaattggctaccgggagaacagccctgggagcaacgggcagtacagc
attgttgagatgaaggccacaggggacagcgaggtctacacccttgacaacctgaagaaa
tttgcccagtatggtgtggtggtgcaggccttcaaccgtgcaggcacaggcccctcgtcc
agcgagatcaacgccacgacgctggaggatgtgcccagccaaccgcctgaaaatgtgagg
gccttgtccatcacctccgatgtggctgtgatttcctggtcggagccgccaaggagcacc
ctcaacggtgtcctgaagggataccgtgtcatcttctggtctctctacatggatggagag
tggggggagatgcagaatatcaccaccgtccgggagcgagcagagctgcgtggcatggag
aagttcaccaactacagcgtgcaggtcctggcttacacccaggctggtgatggtgtccgc
agcaacgtgctccacatccagaccaaggaagacattcccggtcctcctgctgggatcaaa
gcggtcccttcttcctccagcagcgtggtggtctcttggcttccccccaccaaacccaat
ggaatcatccggaagtacaccatcttctgctccagcccaggctctgggcagccggctccc
agcgagtacgaaaccagccctgagcagctgttctatcgcattgcgcacctgaaccgtggg
cagcagtacatgctttgggttgcagccgtaacctcggcgggacgtggcaacatgagcgaa
aaggtcaccattgagcctgctggaaaagccccagccaagataatttcgtttggtggcact
gtcaccaccccgtggatgaaggatgtgcgcctgccctgccattcagttggggagcctgcc
ccagcagtgaaatggaccaaggacagtgacgactctgctattccggtggccgtggatggg
caccgccagatccagaccaacggcacgctgattctgcgctctgtgaaagctgaggactct
ggatactacacctgcacagctaccaacacatgggggtttgacaccatcattgtcaacttg
ctggtgcaagtcccccctgaccagccccggctgactgtatcaaagacctcggcctcctcc
atcaccttggcctggatccctggtgacaatggtggcagctccatccgagggtttgtgctg
cagtactctgttgacaacagtgaggagtggaaagacgtcttcatcacttccacggagcgt
tccttcaagctggagagcctgaaatgcgggacttggtacaaggtgaagctggcagccaag
aacagcgttggcgctgggcgcatcagtgagatcatcgaggccaagacccatggcagagag
ccctcctttaacaaggaccagcacctgttcacccacattaactccacgcatgcaaggctg
aacctgcaaggctggaacagtggcggctgccccatcctggccgtcgtcctagaataccgg
cccaagggcacctgggtctggcagagcctgcgggccaattactccaacgaggtctttctg
acggagctgcgcgaagccacgtggtacgaactgcgcatgaaggcatgcaacagcgccggc
tgcggcaatgagaccatgcagtttgccaccttggactacgatggcagtaccatcccaccc
atcaagtctgcccagggggagggcgacgacgtgaagaagcttttcaccattgcgtgtccc
gtcatcttggccacgcttggcgtggcgttgctctttgtcgtccgcaagaagcggaaggag
aagcgcctgaaacgcttgcgagatgccaaaagtttggctgaaatgcttatcagtaagaat
aaccggagctttgacacgccagtgaaggggcccccgcagggccctcgactgcacattgac
attccccgtgttcaactcctcattgaggacaaggaaggaatcaagcagataggagatgac
aaggcaaccatcccagtgacggacacagaattcaaccaggctgtgaacccacagagcttc
tgcactggcgtttccctgcaccatccagcactcatccagaacacaggacctctgatagac
atgtctgatattcgccctggcaccaatccggtttccaggaaaagtgtgaagtccgcacat
agtaccaggaacagatactccagccaatggaccctcaccaagtgtcaggcctccacccca
gcacggaccctcacctctgactggaggacagttggctcccagcatggcatcacagtgaca
gaaagtgacagttacagtgccagcttatcccaggatactgacaaagggaggaacagcatg
gtgtccacagagagcgcctcgtccacttacgaggagctggcacgcgcctatgaacatgcc
aagctggaggagcagctgcagcacgccaagtttgagatcaccgagtgcttcatctctgac
agctcctctgaccagatgaccacgggcaccaacgagaacgccgacagcatgacctccatg
agcaccccatcggagcctggcatctgccgcttcacggcctccccgcccaagccgcaggac
agcgaccgcggcaagggggtagctgtgcccatccctcaccgagcaaataaaagcgactac
tgcaacctgcctttgtacatgaaatccgaaactttcttccgcaagccagaccttcatgac
ccatgcccagtagtgccgccccgcgaggcctccatccggaacctggcccgggcctaccac
acgcaggccaggcacctaacgttagaccccagcagcaaagccttggctgtgccccacgtg
agtgcaaccacgactaccttacctcagcggactctggccatgcctggctcagcaagtgct
gctcctcctcctcctgccgccgccgctgctgctgctgccgccaccaccacggctactgca
cccgtagctgcccctgcctcaagcactgaacctgctgctgctcccagtgctgagccacgt
ttgcctccccacaccaaaatgggggggtctagagactcgctactagaaatgagcacctct
ggtatagggaggtcccagaaacagggagctggcgcctactcaaaatcctatacactggtg
tag
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integrated database retrieval system
