Podarcis raffonei (Aeolian wall lizard): 128403064
Help
Entry
128403064 CDS
T09310
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03440
Homologous recombination
praf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128403064 (BRIP1)
03460 Fanconi anemia pathway
128403064 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
praf03400
]
128403064 (BRIP1)
Enzymes [BR:
praf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128403064 (BRIP1)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
128403064 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
128403064 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
128403064
NCBI-ProteinID:
XP_053223649
LinkDB
All DBs
Position
15:4897390..5103166
Genome browser
AA seq
1307 aa
AA seq
DB search
MASSASEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNSKQHCLLESPTGSGKSLALLCSA
LSWQQSLYDKPLDDLPCSKECKKPETLMPCGCRCHAAQAQNSVAVSQDASCSFTNSETVT
PVKSGTKSRNKADEISRTTLASKLSAKKQASLHEDGDDDFIVDRKRIRSLETDQQARKRH
RLSQGTQLVDALEVYRQQKNGELTVCSEKPVPFSLKTLQPSSACIQCSCSLAEAKVKETT
DKKKKENGGKAFVPKIFFGTRTHKQIAQITREMRRTAYSDIPMTILSSRDHTCVHPTVSS
CSSKNEKCVELLEAKNGTSCSYYHGVHKLSEHHALKSARKKYQAWDIEDLVSLGKKLRAC
AYFAARELMAEARIVFCPYNYLLDSQIRESMEIDLKDQVIILDEAHNIEDCARESASYSV
TDTQLKLAREELDTMVNNNIRRKDHEPLRAVCCSLTNWLRETIGQLVERNYETSSKVWSG
KQMVAFLHDMGITNATFPILQKHFAAVLEKEEKVNLFNGGEELVSVPIISPSTQIMLKGL
FMVLGYLFKENHGFADDYRVALQQAYVWTNENPVDTPDENGFFARSKRRSRQKTAVHTLS
FWCLNPAVAFSDMCGNVRSVVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVGT
VGAGPKGRSLCATFQHAETFDFQDEVGELLLSVCQTIGQGVLCFVPSYKMLDKLKDRWLH
TGLWEKLELIKTVIVEPKGGNKADFDELLQVYYDAIKFKEGKDGALLIAVCRGKVSEGLD
FSDDNARAVVTIGIPFPNVKDLQVELKRKYNDLHSKDRGLLPGSQWYEIQAFRALNQALG
RCIRHRSDWGALILVDDRFRRNPNKYIAGLSKWIRQLVQHHENFDCALGSLDAFAKTNQK
STDSSTQGNDRSALMSSSSKDLSSSSFLEATLHLSPGVTVEREVHDLTLETLSAADVIAI
NPATSSQSCNISANQQNLQPFCQTVKQGNLTDSKPKTLIGKNKREKANNQLSSVSIKQYF
SKPLTSTPLHALNEKDLSKAKCQPKIPMDESTQLVANEPQQNVSLVEQQRATGLSPCREP
ISFSAGKAIQEYPTEQQLWAHEEGRDVAFSPVRGNANLSTSDIAAETDANDDSIYFTPEL
FNSVESAVQKKELSTHTCSETGISFETASSSKVEELYETSALKLVDAMVSIKTDADTKAE
EPGIVQSSESTGGAVRAAGHSTNSIGEAEQEAKRKKLSRSRNKGLKVQRTYKRRIRKPSI
KGGAKSLTGDAESSSLQVGTVLYSLEVRNIALSNCLHADPPGCSEPV
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcagcgtcagaatacaccattggaggtgtgaaaattctcttcccttgcaag
gcatacccttcacagcttgctatgatgaatgcaattgtgaaggggctcaactccaagcag
cactgcctgttggagagtcctactggaagcgggaaaagcctggcgttgctttgctctgca
ttgtcatggcaacagtcactttacgacaaaccgcttgatgacttgccatgttcaaaggaa
tgcaagaagccagagaccttgatgccatgtggctgtcgctgtcatgcagctcaggcccag
aacagtgtagcggtgagtcaagacgcatcttgttccttcaccaacagtgaaacagtgaca
cccgtgaaaagtggaaccaagtcaagaaacaaagcagacgagatctcaagaaccacactc
gcttccaaactatctgcaaagaagcaggcgtctttgcatgaagatggagatgatgatttt
atagtagataggaaaaggattcgttcattagaaacagaccagcaggcaaggaaacggcac
cggctgtcccaaggaacccaattagttgacgctctggaggtttaccggcagcagaaaaat
ggggaattgactgtgtgctctgaaaaaccggtccctttctctctcaaaacattacagcct
tccagtgcctgcattcagtgctcctgttctttggctgaagcaaaagtcaaagaaacaact
gataaaaagaagaaagaaaatggaggaaaggcatttgtccccaaaatattttttggaact
cgcacccacaaacaaattgctcagattaccagggagatgcggaggacggcatattcagat
atccccatgactattctttctagcagggaccacacttgtgtccatccaacagtgtccagc
tgcagcagcaagaatgaaaaatgtgtagagttgctggaagccaaaaatggcacatcttgt
tcttactaccatggagtccataagcttagcgaacatcatgccttaaaatctgcacgtaag
aaataccaggcttgggacatcgaagacctagtgagcctcgggaagaagctacgtgcctgt
gcctattttgcagctcgagagcttatggcggaggctagaattgtgttttgtccttacaac
tatcttctagactcacaaataagagagagtatggagattgacttgaaagaccaggtgatc
attttagatgaagctcataatattgaggattgtgcacgggaatcggccagctacagcgtg
acagacactcaactcaaattggcccgagaggagctggacaccatggtgaataacaacatt
aggaggaaggatcacgaaccattgcgtgctgtatgctgcagtctgacaaattggttgagg
gaaactattggtcagcttgtggagagaaattatgagacctctagtaaggtttggagtgga
aaacaaatggtggcgttcctgcatgatatgggaataaccaacgccacgtttcccatctta
cagaaacattttgctgctgttcttgaaaaggaggaaaaagtaaacctgttcaatggagga
gaagagcttgtttcggttccaattataagcccttcgactcagattatgctgaaggggtta
ttcatggtcctggggtatctttttaaagagaatcacgggtttgctgatgactacagagtt
gcattgcagcaagcctacgtttggactaatgaaaatccagttgatactccagatgagaat
ggtttctttgcacgatcaaaaagaagatcgcgacaaaaaacagcagtgcatacactcagc
ttctggtgcttgaatccagctgtggccttctcagacatgtgtggcaatgttagatcagtc
gtgttgacctcaggaacgctctctccgatggactccttttcttctgagcttggtgtgaag
ttttccattcaacttgaagcaaaccatgttattaggaattcccaggtgtgggttggtact
gttggagctggcccgaaaggcaggtcattatgtgctacgttccagcacgctgagaccttt
gatttccaggatgaagttggggagcttctgctctcagtttgtcagaccatcggccaaggg
gttttgtgctttgtgccatcttacaagatgttagataaactgaaagatcgctggctgcac
actggcttatgggaaaagcttgaactgattaagacagtcatcgtggaacctaaaggaggc
aacaaagctgactttgacgagctgctgcaagtatactacgatgccataaaatttaaagaa
ggaaaagatggggcacttcttattgctgtctgcagaggcaaagtcagtgaaggcttggat
ttctctgatgacaatgcccgtgccgttgtaaccataggaattccgtttccaaacgtgaag
gaccttcaggttgagcttaagaggaagtataatgacctacattccaaagacagaggactt
ctaccaggcagccagtggtatgaaatccaggccttcagagctctcaaccaagcattgggc
aggtgtattcgccacaggagcgattggggagcgcttattttagttgatgatcgcttcaga
aggaacccaaataaatacatagctggattgtcaaaatggattcgtcagctagtccagcac
catgaaaacttcgattgtgcccttggttctttggatgcgtttgctaaaacaaaccagaag
agcacagattcttcgactcagggtaacgacagatctgcgctcatgtcttcaagctcaaaa
gatctgtcatcaagttctttcctggaggcaactcttcatctatcaccaggtgttactgtt
gaaagagaagtgcatgatttaaccctagaaacactttctgctgcagatgtcattgcaatt
aatccagcgacatccagtcagtcatgtaacatatctgcaaatcaacaaaatctccagcca
ttctgccagactgtaaagcaaggaaaccttaccgactccaaacccaaaaccttgatcggg
aagaacaagagggagaaagcaaataatcagctctcctctgtcagtataaaacagtatttc
agtaaaccattgacttcaacacccctgcatgccctgaatgagaaagacctctccaaagct
aaatgccaaccaaagataccaatggatgaaagtactcagcttgttgcaaatgaaccccag
cagaatgtgtctttggttgagcaacagagggcaactggattgtcaccatgtagagaaccg
attagcttttctgctggaaaggccattcaagaatatcctactgagcagcagctctgggct
cacgaagaggggagggacgtggcattttctccagtgagaggaaacgcgaacctttcaaca
tcagatatagctgcagagacagatgccaacgatgacagtatctatttcacacctgaactt
ttcaacagtgtcgagtcagcagtacagaaaaaggagttgtcaactcatacttgcagcgag
actgggatttcctttgaaactgcaagctctagtaaagttgaagagctttatgaaaccagt
gctctaaagctagtagatgcaatggtcagcattaaaaccgatgctgacacgaaggcagag
gagcctggaatcgtgcagagcagtgagagtactggaggggcagtcagagcagctggacat
agtactaatagcataggtgaagctgagcaggaggcaaagagaaagaagctttccagatca
cgaaacaaaggactgaaagtacagagaacatataaacgaagaatcaggaaaccatctatt
aaaggaggggccaagtcactgacaggagatgcagagagttccagcttgcaagtcggtact
gtgttatattctctggaggtgagaaatattgctttaagtaactgtctccatgcagaccct
cctggctgttctgagcctgtatag
DBGET
integrated database retrieval system
