Podarcis raffonei (Aeolian wall lizard): 128403331
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Entry
128403331 CDS
T09310
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03030
DNA replication
praf03410
Base excision repair
praf03420
Nucleotide excision repair
praf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128403331 (RFC5)
03410 Base excision repair
128403331 (RFC5)
03420 Nucleotide excision repair
128403331 (RFC5)
03430 Mismatch repair
128403331 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
praf03032
]
128403331 (RFC5)
03036 Chromosome and associated proteins [BR:
praf03036
]
128403331 (RFC5)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128403331 (RFC5)
DNA replication proteins [BR:
praf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128403331 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
128403331 (RFC5)
Chromosome and associated proteins [BR:
praf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128403331 (RFC5)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128403331 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
128403331 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_24
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
ATPase_2
AAA_19
AAA_30
AAA_7
TIP49
TniB
PhoH
DNAX_ATPase_lid
nSTAND3
Gp44_lid
Mg_chelatase
AraA_central
bpMoxR
Thioredoxin_6
NPHP3_N
AAA_3
Motif
Other DBs
NCBI-GeneID:
128403331
NCBI-ProteinID:
XP_053223994
LinkDB
All DBs
Position
16:complement(19293931..19307087)
Genome browser
AA seq
341 aa
AA seq
DB search
MERAAAAAPAGRTVAGRNANLPWVEKYRPQTLSDLISHQDILSTIQKFISEDRLPHLLLY
GPPGTGKTSTILACAKQLYKDKAFGSMVLELNASDDRGIDIVRGPILNFASTRSIFKKGF
KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTP
ELMVPRLQHVIEEEGVDVSDDGMKALVTLSNGDMRRSLNILQSTSMAFGKVTEETVYTCT
GQPLKSDIANILDWMLNQDFTTAYHNIMELKTLKGLALQDILTEIHLFVHRVDFPSSVRI
QLLIKMADVEHRLAAGTSEKIQLGALVGAFQVTRDLITAEA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcggcggcggcggcgcctgcggggaggacggtggccgggaggaacgcgaac
ttgccctgggtagaaaaataccgacctcagacgctgagtgatctgatttctcatcaggac
attctgagtaccattcagaagttcatcagtgaagatcgactgcctcatctccttctctat
ggacctccagggactggcaagacttccaccattttggcctgtgctaaacagctttacaaa
gacaaagcgtttggctcaatggtccttgagctcaatgcttcagacgacaggggaattgac
attgtccgagggcctatcctgaactttgccagcacaaggagcatctttaagaaaggcttt
aagctggtgattctggatgaagcagatgccatgacacaggatgcccagaatgccctcagg
cgtgtgatagagaagttcaccgagaacaccaggttttgcctaatctgcaactacctctcc
aagatcatcccagccctgcagtccaggtgcaccagattccgctttgggcccctgactcct
gagctcatggttcctcggctgcagcacgtcatcgaggaggagggagttgatgtaagcgat
gatgggatgaaagccctggtgacgctttccaatggcgatatgcgtaggtctctgaacatc
ttacagagcacatccatggcctttggaaaggtgaccgaggagacagtctacacctgcacg
gggcagccgctcaagtctgacattgccaacatcctcgattggatgctgaaccaagatttc
accaccgcctatcacaatatcatggagctgaaaacgttgaagggtttagctcttcaggac
atcctgacagaaatccacttgtttgtccaccgagttgacttcccatcatctgtacgaatc
cagttgctgatcaagatggcggatgttgagcaccgcctggctgcagggacaagcgagaag
attcagctgggggcccttgttggtgccttccaggtcaccagagacctgatcacagcagag
gcttag
DBGET
integrated database retrieval system
