Podarcis raffonei (Aeolian wall lizard): 128403340
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Entry
128403340 CDS
T09310
Symbol
MSI1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128403340 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
praf03019
]
128403340 (MSI1)
Messenger RNA biogenesis [BR:
praf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128403340 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
128403340
NCBI-ProteinID:
XP_053224009
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Position
16:complement(25975055..26037944)
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AA seq
357 aa
AA seq
DB search
METEASQAGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTVLLPPVGSTPSRTG
GFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagccagccaggccggcctcgcctccccggactccccccacgacccctgc
aaaatgttcatcgggggattgagctggcaaaccacgcaagaaggcttgcgggagtatttt
agccagtttggcgaggtgaaagagtgcctggtcatgagggacccactgacaaagcgatcc
agaggattcgggtttgtcactttcatggaccaagctggtgtggacaaggtactggcccaa
tctagacatgaactggactccaagacgattgacccaaaggttgcatttccccgcagagca
cagcccaagatggtgacacggaccaagaagatatttgtgggcggcctctccgtgaacacc
accgtggaggatgtgaaacagtattttgaacaatttgggaaggtggacgacgcaatgctc
atgtttgacaagaccacgaacaggcaccgaggttttggatttgtcacattcgaaagtgaa
gacattgtggagaaagtctgcgagatccacttccatgagatcaacaacaaaatggtggaa
tgtaaaaaagctcagccaaaggaagtgatgtcccctactggctctgcaagagggcggtcc
cgggtgatgccttacggaatggacgccttcatgctcgggattggcatgttgggttaccca
ggttttcaggctgccacctacgccagccgaagttacacgggcattgcgcctggctacact
taccagttccctgaattccgggtagagaggacccccctcccgagtgccccagtcctccct
gagctgacagccatccctctcactgcgtatggacccatggcggcggcggcagcggcagca
gctgtggtgcgagggacagtcctgcttcctcctgtagggtccaccccgagccgcaccggt
ggattcctgggcaccaccagccccgggccaatggcggagctttacggagcagccaatcag
gattcaggagtcagcagctacatcagcgcagcgagtcccgccccaagcactggctttggc
cacagcctagggggacctttgattgcaacagcgtttactaatggttaccactga
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