Podarcis raffonei (Aeolian wall lizard): 128403359
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Entry
128403359 CDS
T09310
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128403359 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
praf03041
]
128403359 (SF1)
Spliceosome [BR:
praf03041
]
Complex A
Other components
Complex A specific factors
128403359 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
KH_NusA_1st
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
128403359
NCBI-ProteinID:
XP_053224041
LinkDB
All DBs
Position
16:14796416..14813183
Genome browser
AA seq
791 aa
AA seq
DB search
MATGANATPLGKLHPPPPPGKAGYPLPPPGLVMQGPPPPPPPPGPAQAQPQPAIPSLMAA
AAFPFAALPPPPPPPPPPPPPPPQQPQPPPQQQQPPPPPPPAQQQQQVQQAQYSQYRFPS
PPPQPPLGLEQQQPPPQGPQHLHHLQQQDEGGQAGAGNQETYLSADFPNKKRKRSRWNQD
TMDQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEP
IYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD
EYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHA
LVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPW
QNTETRSITNTTVCTKCGGAGHIASDCKFARPGDPQSAQDKARMDKEYLSLMAELGEAPV
PASVGSSSGPSNPPLPSGPRPSGPGNNQPPPNRPPWMNSGPSENRPFHGMHGGGGGGGGG
GGGGGGGPGGPGGPHNFPHHMSNMGGHGGHPMQHNPNGPPPWMQPHNPPMNQGPHPHGPP
GPHHMDQYLGNAPVGSGVYRLQGKGMMPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQ
QPPPPPPSSSTPLPWQQNTTTTTTTSAGTGAIPPWQQQQGAAAVATSTGAPQMQGSPSMV
PLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPTNFVTMMGVGVPALPPFGM
PPAPPPPPPQN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggagcgaacgcgacgccgctggggaagctccacccgcccccgccgccgggc
aaggccggctacccgctgcctccgccgggcctggtcatgcaagggcccccgcctccaccg
ccgccgccgggccctgcgcaggcccagcctcagcccgccatccccagcctcatggcggcc
gccgccttccccttcgccgccctcccgccgccaccgccgccgcctcctccaccgccgcca
ccaccaccgcagcagccccagccgcctccccagcagcagcagcccccgccgccgccaccg
ccggcccagcagcagcagcaggttcaacaggcccagtatagccagtaccgcttcccctcg
cccccgccgcagcccccgctgggcctggagcagcagcagcccccgccgcaaggcccgcag
cacctccaccacctccagcagcaggacgagggcggacaggccggggccgggaaccaagaa
acctatctgtctgcagattttcccaataaaaagaggaagaggagcagatggaaccaagat
accatggaccagaagactgtcatccctggaatgcccacagttatccctcctgggcttacc
cgtgaacaagagagagcttatatagtgcaactgcagatagaagacctgactcgtaaactg
cgcacaggagacctgggcatcccccctaaccctgaggacaggtctccttcccctgaaccg
atttacaatagcgaggggaagcgtttgaacacccgtgaattccgtacacgcaagaaactg
gaagaggagaggcacaacctgataacagagatggtggcgctcaacccagacttcaagcca
ccagctgattacaaacctccagcaactcgagtgagtgataaggtgatgatcccacaggat
gaatatcctgagattaacttcgttgggcttctgattggacccagagggaacacattgaag
aacattgagaaggagtgcaatgctaagattatgatcagaggcaaagggtctgtgaaagaa
gggaaggtgggccggaaagatggccagatgctgcctggtgaggatgagccacttcatgct
ttggtcacagctaacaccatggagaatgtgaagaaggcagtggaacagatccgtaacatt
ctgaagcaaggcattgaaactccagaggaccagaatgatctgcgcaagatgcagctgcgg
gaactggcccgcctcaatgggacactgcgtgaagatgacaacagaattctgcgtccatgg
caaaacactgagactcgcagcatcaccaacaccactgtgtgtaccaagtgtggaggagct
ggccacattgcatcagattgcaaatttgcccggcctggagacccccagtcagcccaggat
aaagcacgcatggacaaggaatacctgtctttgatggctgagttgggagaagcccctgtc
ccagcatcggtgggatcatcttcgggaccttccaatccaccactgccaagtggtccaaga
ccttcagggccaggaaacaaccagccacctcctaaccgcccgccatggatgaactctggc
ccctctgaaaacaggcccttccatggcatgcatggtggtggaggaggtggaggcggagga
ggaggaggaggaggggggggacctggagggcctggtggccctcacaatttcccccaccac
atgtcaaatatgggaggacatgggggtcacccaatgcagcacaaccccaacggtcctcca
ccttggatgcagcctcacaacccaccaatgaaccagggaccacatcctcacggtcccccc
gggccccatcacatggatcagtacctgggcaatgcgccagtgggctctggggtctatcgc
ctccaaggaaaaggtatgatgccgcctccgatgggtatgatgccccctccgccccctcca
cccagtggtcagcctcccccgcctccctctggtcctcttcccccatggcagcagcagcag
cagcctccacccccgcctcccagcagcagtactcccttgccatggcagcaaaatacgacg
accaccaccaccacgagcgctggcaccggggccatccctccatggcagcagcagcaggga
gcggcggcggtggcaacttctacgggggccccgcagatgcaaggcagcccctccatggtg
cctttgcctccaggggtccagcctccgcttccgcccggggccccgcctcctcccccgccc
ccgccgcctggctccgcgggcatgatgtacgcccctccccctcctccgcctcccatggac
cctactaatttcgtcaccatgatgggggttggagtgccagccttgccaccgtttggcatg
ccccctgctcccccaccacccccaccacagaactga
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