Podarcis raffonei (Aeolian wall lizard): 128403363
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Entry
128403363 CDS
T09310
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf03030
DNA replication
praf03410
Base excision repair
praf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128403363 (POLE)
03410 Base excision repair
128403363 (POLE)
03420 Nucleotide excision repair
128403363 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
praf03032
]
128403363 (POLE)
03400 DNA repair and recombination proteins [BR:
praf03400
]
128403363 (POLE)
Enzymes [BR:
praf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128403363 (POLE)
DNA replication proteins [BR:
praf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
128403363 (POLE)
DNA repair and recombination proteins [BR:
praf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
128403363 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
PTAC12
Motif
Other DBs
NCBI-GeneID:
128403363
NCBI-ProteinID:
XP_053224053
LinkDB
All DBs
Position
16:complement(24780391..24838384)
Genome browser
AA seq
2293 aa
AA seq
DB search
MAYWRGGGRRRRWGTEPPAEGGEGEAPPRDDSTSFSALKRLERTQWTDKIDAQFGFERMK
EPGERTGWLINMHPTEVLDEDKRLVSAVDYYFIQEDGSRFKVALPYRPYFYIATQKGCDR
EVSSFLSKKFQGKIAKLDTVPKEDLDLPNHLVGLKRTYLKLSFNTVDDLVKVRKEITPAV
KKNRERDQAMDTYTAMLTSALAGNSLSSKEEAPSKKTADQMDNIVDMREYDVPYHIRLSI
DLKIHVAHWYNVRYRGSSFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIM
MISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQET
KPTIMVTYNGDFFDWPFVETRAAAHGLNMQQEIGFQKDSQGEYKAPSCIHMDCLRWVKRD
SYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYV
HPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVL
DSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTLRHAIEEEEGIPLDQVT
NFQEVCDEIKVKLNSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVNEATCAAC
DFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRVFHELSREE
QAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKV
WKKKLAAAMESGDASEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGI
VCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTHAKKPKVTISYPG
AMLNIMVKEGFTNDQYQELVDPASLSYVSRSENSIFFEVDGPYLAMILPASKEEGKKLKK
RYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWL
DVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGL
SCRFIISKKPEGSPVTERAIPLAIFQAELSVRRHYLRKWLKSPSLQDFDIRTILDWDYYI
ERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDMYKQKKISELFTSEGKRQ
VSANVIQEGTPSTQVADMEDFGVAKSLQPGVPISNKRKRIPTAEESQQQSQNSELTQSWR
EILGPPPPSGTTKEERLVWLCYHKKKWEVQARQRQERRKRRRLADGESVLGGGLIRARPS
MGLGSYLSKTARSILDMPWQIVQIAETSQPGLFKLWAVIGSDLHCLKLNVPRVFYVNQRI
PKPEESTAYRKVNRILPRSNLVYNLYEYSVPEEMYQEHINEINASLSAPDIEGVYETQIP
LLLRALIRLGCVCMVNRNLVRYLTGREAETFNLEHLEMRSLAQFSYLEPGSIRHIYLYHN
SQGNKALFGLFIPSQRKASVFVLDTVRSNQMPNLNNMYSAEHSAMVAKVGEELLPPNKHA
FEVRAETDLKTICRAIQRLLLGYKDERRGPTLIAVQSNWDLKRLVGGMPVLEEFPLVPVQ
VADDVNYSILDWQRHAARHMIRRYLSLDTCLSQAFEMSRYYHIPIGNLPDDISTFGTDLF
FSRHLHRHNHLLWLSPTSRPDLGGKEADDSRLVMEFDERVSVEINNPGCYSTVCVELDIQ
SLAVNTVLQSHHVNDMEGASSMCISFDVIQPASLEDMVTGNQATSTLASYDETALCSNTF
RVLKSVVVGWVKEITQYHNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHSMMKKLFLQL
VAEFKRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSREIFHSLTISFSRCWE
FLLWMDPANYGGIKGKVPSQIHYGEGISDKQAVSVEGSEEEEEEEEEEKEEGAEEDNGVE
ELLENNWNIMQYLPQAASCQNYFLMIVSAYIVAVYHSMKEEMRRSAPGSTPVKRRASSQV
SQEPVGEAGVMPGMITFSQEYVTNELTQSFFTITQKVQKKVTGSRRTTEPSEMFPALPGS
HLMLNNPALEFVKYVCKVLSLDTNIANQVSKLKRDLLRLIEVGEFSEEAQFRDPCRSYVI
PEMICRNCNFCRDLDLCKDPALSQDGSVLPTWACSNCQAQYDSDAIEMALVEALQKKLMA
FTLQDLVCLKCKGIKDTHMPVYCSCAGDFDLLLPTKAFLEQLKVFQSIARHYNMGYLLEN
IKWLLQMNPQLLL
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattggagaggcggcgggcggcgtcgccggtggggaacggagccccccgcagaa
ggcggcgagggagaggcgccgccgcgagatgatagcacctcgttttctgccctcaagcgt
ttggagcgcacccagtggactgacaagatcgatgcacaattcgggtttgagaggatgaaa
gaaccaggcgaaaggacaggatggttgatcaacatgcaccctacggaggtgttagatgag
gataaacgtttggtcagcgctgtggattactatttcattcaggaggacggaagcaggttt
aaggtggcactgccctataggccatacttctacattgcaacccaaaagggttgtgaccga
gaagtgtcgtccttcctttccaaaaagttccagggcaaaatagcaaaactggacactgta
cccaaagaggacttggacctgccaaatcacttggtcggcctgaaacggacctacctcaag
ctttctttcaacacggtggatgacctggtaaaggtgcgcaaggagatcacacctgctgtg
aagaaaaacagggaacgggaccaagcgatggacacttacaccgctatgctgaccagtgcc
cttgctgggaacagcctgtccagcaaggaagaggctccctccaagaagaccgctgaccag
atggacaacatagtggacatgcgggagtacgatgtcccctaccacatccgcctgtcgatt
gatctgaagatccacgtggctcactggtacaatgtccgctaccgaggcagcagcttccct
cctgaaatcacccgccgagacgacctggttgaacggccagatcctgtcgtcctggccttt
gacattgagaccaccaaactccctttaaagtttcctgatgcagaaacggaccagatcatg
atgatctcctacatgattgatggccagggttacttgatcacaaacagagagatcgtttca
gaggatattgaagattttgagtttactcccaaaccggagtatgaggggcctttctgtgtc
tttaatgaaccagatgaggcccacctcatccagaggtggtttgaacatgttcaggagacc
aagccaaccatcatggtgacatacaacggagacttctttgactggccctttgtggaaacc
agagcagcagctcacgggctgaatatgcagcaggagatcggattccaaaaggacagccag
ggggaatacaaagctccttcgtgcatccacatggattgtctcaggtgggttaagagagac
agttacctcccagtgggaagccataacttgaaagcggcagccaaagcgaagctgggctac
gaccccgtggagctagatcctgaagagatgtgccggatggctactgaggaacctcagact
ctggccacctactcagtgtccgacgctgttgctacttactacatgtacatgaaatacgtc
caccctttcatctttgctttgtgcaccatcatccccatggagcccgatgaagtgctgcga
aagggctcagggactctgtgtgaggcgctgctcatggtccaggcctatcacgccaacatc
atcttccccaacaagcaagagcaggagttcaacaagctcaccgaggatgggcacgtgctg
gactcggagacctacgtcggggggcacgtggaggccctggagtcgggggtctttcgcagt
gacattccctgccgcttcaagatgaaccctgctgccttcgacttccttttgcagcgtgtg
gagaagactctgcgccacgccattgaggaagaggagggaataccccttgaccaagtgacc
aacttccaggaggtttgcgatgaaatcaaagtcaagctgaactccctgaaggaagtcccc
aacaggattgaatgtcctctgatataccacctggacgtgggggccatgtacccgaatatc
atcctaaccaaccggcttcagccctcggcgatggtgaacgaggccacgtgcgccgcctgc
gacttcaacaaaccaggcgccaactgtcagcggcggatgacctggcagtggagaggagaa
ttcatgcccgcgagccgcagcgagtaccatcgcatccagcaacagctggagtcggagaag
ttcccccctctcttcccagatggaccgccccgggtgttccatgagctgtcccgggaggag
caagcaaagtacgagaagaagcgcttggcagattactgccgcaaagcctacaagaaaatc
cacgtgacgaaggttgaggagcgtgtcaccaccatctgccagcgggaaaactccttctat
gtggacaccgtgcgggcctttcgcgaccgccgctacgagttcaaggggctgcataaggtg
tggaagaagaagctggctgccgccatggagtcgggtgatgcctcggaagcgaagcgctgc
aagaacatggagatcttgtacgactccctgcagctggcacacaagtgcatcctcaactcc
ttttacggatacgtcatgcgcaaaggagctcggtggtactccatggaaatggctggcatt
gtctgcttcactggcgccaacatcatcacacaggccagggagctgatagagcaaattggg
aggccgctggagctggacacagacgggatctggtgtgtgcttccaaacagcttcccagaa
aactttgtcatcaaatcaacccacgccaagaagcccaaggtgacaatctcctatccgggt
gctatgctgaacatcatggtgaaggaggggtttacgaatgatcagtaccaggagctggtg
gacccggcctcgctctcctacgtttcccgctcagagaacagcatcttctttgaagtggac
ggcccgtacttggccatgattctccccgcctccaaggaagagggcaagaagctgaagaaa
aggtacgctgtgttcaacgaggacggctccctggccgagctaaaggggtttgaggtgaaa
cggcggggggagctgcagctggttaagatcttccagtcgtccgtctttgaggccttcctg
aaaggcaccactttggaagaggtttatgcctccgtcgccaaagtggccgactactggctg
gatgtgctctacagcaaggctgccaatatgcctgactcagagttgtttgagcttatctcc
gagaaccggtccatgtcccgcaagctggaggattatggggagcaaaaatccacctccatc
agcactgccaagcgcctggctgagttcctgggggatcagatggtgaaggatgctggtctg
agctgccggtttatcatttctaagaagccagaaggatccccagtcacagagagggccatt
ccgctggccattttccaggctgagctctcggtccgcaggcactatctccggaaatggctc
aagagcccctccctgcaggattttgacatccggacgatcctggattgggactattacatc
gagagactgggcagcacaattcagaaaatcatcaccatcccagcagccctgcagcaggta
aaaaaccccgttcctcgcgtccgacaccccgactggctccacaagaagctcttggaaaaa
aatgacatgtacaagcagaagaaaatcagtgagctgttcacaagtgagggcaagagacag
gtctctgccaatgtaatccaggagggcacaccctccacacaggtggctgacatggaagat
tttggggtcgccaagtctctgcagccaggggtccccatttcgaataaacgtaaacgcatc
cctacagcggaggagagccagcagcaatcccagaattcggaactaacgcagtcctggagg
gagatcttgggcccaccacctcccagtggaaccaccaaggaggagcgcctggtctggctg
tgctaccacaagaagaagtgggaggttcaggctcgccagcgccaggagcgccgcaagaga
cggcggctggcagatggcgagtcggtcctgggcggggggctgatcagggcaaggccctcc
atggggctcggcagctacctgagcaaaacggcccgcagcatcctggacatgccctggcag
atcgtgcagattgctgagaccagccagccaggcctcttcaagctgtgggccgtcattgga
agcgacctgcactgcctcaagctgaatgtccctcgtgttttctatgtcaaccagcgcatc
cctaaacctgaagagagcactgcatatcggaaggtaaacaggatccttcctcgctccaac
ttggtttacaacctctatgagtactctgtgcccgaggaaatgtaccaggagcacatcaac
gaaatcaacgccagcctctctgccccagatatagagggggtgtacgagacccagatccca
ttacttctgcgggccctgatccgcctgggctgcgtgtgcatggtcaacaggaacttggta
aggtacctcaccggccgggaggctgaaaccttcaacctggagcacctcgagatgcgctcc
ttggcccagttcagctacctggagccaggtagcatccggcacatctacctgtaccacaac
tcccaaggcaacaaggcactgtttggcctcttcatcccatctcagcggaaggcatctgtt
tttgtgcttgacacggtgcggagcaaccagatgcccaacctcaacaacatgtactcggcg
gagcacagcgccatggtggcgaaggtaggcgaggagctccttccgcccaacaagcacgcc
ttcgaggtgcgagcggagacagacctcaagaccatctgcagggccatccagcgcctcctg
ctgggctacaaggacgagcgccggggccccaccctcattgccgtgcagtccaattgggac
ttgaagaggctggtcggagggatgcctgtcttggaggagttcccgctggttcctgtccag
gtggccgatgacgtcaactacagcatcctggactggcagcgccatgctgcgcggcacatg
atccggcgctacctcagcttggacacctgcctttctcaggcctttgagatgagcaggtac
taccacatccccatcgggaacctccctgatgacatctccacctttggcacagacctcttc
ttctcccgccacctccaccgccacaaccacctcctgtggctctctcccacctcccgcccg
gacctggggggcaaggaggcagacgacagccgcctggtcatggagtttgacgagagggtc
tccgtcgagatcaataacccgggctgctattccacagtctgcgtggagctcgatatccaa
agcctggcggtgaacaccgtcctgcagtcgcatcacgtcaacgacatggagggggcctcc
agtatgtgcatcagctttgacgtgatccagccggcgtcactggaggacatggtcacgggg
aaccaggcaaccagcaccctggccagctacgacgaaacagccctctgctccaacacattc
agggtcttgaagagcgtggtggtcggctgggtgaaggagatcacgcagtaccacaacgtc
tacgccgacaaccaggtgatacatttctaccgctggctgcgctccccgacttcgctgctc
tacgatcctgccttgcaccgcatgttgcacagcatgatgaagaagctcttcctccagttg
gtggcagagttcaagcgcctcggctcctcggtggtttacgccaatttcaaccgcatcatc
ctatgcaccaagaagcggcgcatcgaagatgccctggcctacgtagagtacatcaccaac
agcatccattcgagagaaatcttccactcgttgaccatttctttctcgcgctgctgggag
ttcttgctgtggatggacccagctaattacggcgggatcaaaggcaaagtgccgtcccag
atccactacggggaggggatcagtgataaacaggcagtttccgtcgaaggcagtgaagag
gaggaggaagaagaagaagaagagaaggaagaaggggctgaagaggacaatggcgtggaa
gaactgctggagaacaattggaacatcatgcagtacctgccccaagcagcctcctgccag
aattacttcctcatgatcgtgtctgcatacatcgttgctgtctaccacagcatgaaggaa
gagatgcgtcggagcgctcctgggagcacccccgtcaagaggcgagcaagcagccaggtc
tcccaggagcctgtgggagaggcaggtgtcatgcctggcatgatcaccttctcccaggag
tacgtcaccaacgagctcacccagagcttcttcaccatcacccagaaggtgcagaagaag
gtgaccggttcccgacggaccacagagccctctgaaatgttccccgctctgcccggctcc
cacctgatgctcaacaatccagcactggagtttgtgaagtacgtctgcaaggtattgtct
ctggacacgaacatcgccaaccaggtgagcaagctgaaacgggacctgctccgcctgatt
gaagtgggggagttctcagaagaggcccagttccgggacccctgtcgctcttacgtcatc
ccagagatgatctgcaggaactgcaacttctgccgagacctggacctctgcaaggacccg
gccctctctcaggatggctctgtgcttcctacctgggcctgctccaactgccaggcccag
tacgactcagatgccatcgagatggccctggtggaagccctgcagaagaagctgatggcc
ttcacccttcaagatctggtgtgcctcaagtgcaaaggcatcaaagacacccacatgcct
gtgtactgcagctgcgctggagatttcgacctcctgctgcccaccaaggccttcttggaa
cagctgaaggtctttcaaagcattgcccggcactacaacatgggctacctgctggagaat
attaaatggctgcttcagatgaaccctcagcttctcttgtaa
DBGET
integrated database retrieval system
