Podarcis raffonei (Aeolian wall lizard): 128403435
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Entry
128403435 CDS
T09310
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
praf
Podarcis raffonei (Aeolian wall lizard)
Pathway
praf04120
Ubiquitin mediated proteolysis
praf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
praf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128403435 (SYVN1)
04120 Ubiquitin mediated proteolysis
128403435 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
praf04121
]
128403435 (SYVN1)
Enzymes [BR:
praf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128403435 (SYVN1)
Ubiquitin system [BR:
praf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128403435 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128403435
NCBI-ProteinID:
XP_053224175
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Position
16:complement(13610498..13634914)
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AA seq
629 aa
AA seq
DB search
MFRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEGGQQPPQQHQ
TPLIPQPPNFPQGILPPFPPGMFPLWPPMGPFPPVPGVQPPNNADSASAATPSTSGTQAS
AGASRPSGDSASGSDTAAPAGTVPGFAFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEE
LRAMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGMPRTAQPPSAPAASAP
PSETPSPVPGTSEPATTTFQSADSTSSPAEETDAADQADLSPAAAGAKGYTEPSGQEQDG
AQSSPEEPDTAELRRRRLQKLEFPPSSSH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatggctgccagcctggccttgacctctgcagtggtggcg
cacgcctattatcttaagcaccagttctacccgacggtggtgtacctgacgaagtccagt
cccagcatggcggtgctgtacattcaagctttcgtcctggtgttcctattaggcaaattc
atgggcaaagtgttttttggacagctccgagcagcggaaatggagcatctgcttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggatgacttcagc
ccccgttttgtggccctcttcactctcctcctcttcctcaagtgcttccactggctggct
gaggaccgtgtggactttatggagaggagcccaaacatttcctggctcttccatttccgc
attgtctctctgatgctgctcctgggcattctggatttcctgtttgtcagccatgcctac
cacagcatcctcacacggggagcctccgtccagctggtctttggctttgagtatgctatc
ctcatgacgatggtgctcaccatcttcatcaaatacatcctgcactccatcgacctccag
agcgagaacccttgggacaacaaggccgtctacatgctctatacagagctcttcacaggg
ttcatcaaggtcctcttgtacatggccttcatgaccatcatgatcaaagtgcacaccttc
ccactgtttgccatccgacccatgtacctggctatgaggcagttcaagaaagctgtgaca
gatgcaatcatgtcccgccgagctattcgcaacatgaacaccctgtaccctgatgccact
ccagaagaactgcaggccatggacaacgtgtgcattatctgccgggaggagatggtaatg
ggtgcaaaacgcctgccttgcaaccacatattccacaccagctgcctgcggtcctggttc
cagcgccagcagacctgtcccacgtgccggatggacgtcctccgagcctccctccccact
cagtcgcagacgccccctgagcaacaggagggagggcagcagccgccgcagcagcatcag
actccactgatccctcagccaccaaactttccccaaggcatcctgccccctttccctcca
gggatgttccctctgtggccgcccatgggccccttccctccagtgcctggcgtccagccc
cccaacaatgcagacagcgcttcagcagccactccctccacctcaggaacacaagcgtca
gcaggcgcctcgaggcccagtggcgattcagcatccggatcggacaccgcggcccctgca
gggacggtgcctggtttcgccttccctccgccttggatggggatgccgttcccacctctc
tttggtttccctccgatgccggtaccaccatctgggtttgctgggctgacagaggaagag
ctgcgggccatggaaggccatgagcggcagcatttggaagcccgtctccagtgcctgcag
aacatccacacactccttgacgctgccatgctgcagatcaaccagtatctcactgtgttg
gcaacgatcgggatgccccgaactgcacagccaccaagtgccccagccgcttcagcaccc
ccttcggagacccccagccctgtccctggcacaagtgagcctgccaccaccactttccag
tctgcagacagcacctcttcacctgcagaagagacagacgctgcagatcaagcagatctg
tccccagcagcagccggtgccaagggctacacagagccatctggccaggagcaggatgga
gctcaatcttccccagaggaaccagacactgcagagctgcgcaggcgccgacttcaaaaa
ctggaatttcctccttcctcctcccattga
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